RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
RPUSD4-201ENST00000298317 PLIN1O60240 522 aa17.74■□□□□ 0.43
RPUSD4-201ENST00000298317 ADGRL2O95490 1459 aa17.74■□□□□ 0.43
RPUSD4-201ENST00000298317 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
RPUSD4-201ENST00000298317 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
RPUSD4-201ENST00000298317 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
RPUSD4-201ENST00000298317 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
RPUSD4-201ENST00000298317 PKD2Q13563 968 aa17.71■□□□□ 0.43
RPUSD4-201ENST00000298317 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
RPUSD4-201ENST00000298317 CROCC2H7BZ55 1655 aa17.7■□□□□ 0.42
RPUSD4-201ENST00000298317 CAMSAP2Q08AD1 1489 aa17.7■□□□□ 0.42
RPUSD4-201ENST00000298317 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
RPUSD4-201ENST00000298317 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
RPUSD4-201ENST00000298317 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
RPUSD4-201ENST00000298317 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
RPUSD4-201ENST00000298317 CENPQQ7L2Z9 268 aaPredicted RBP17.68■□□□□ 0.42
RPUSD4-201ENST00000298317 ARID3CA6NKF2 412 aa17.67■□□□□ 0.42
RPUSD4-201ENST00000298317 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
RPUSD4-201ENST00000298317 FRAT2O75474 233 aaPredicted RBP17.66■□□□□ 0.42
RPUSD4-201ENST00000298317 ITSN2Q9NZM3 1697 aa17.65■□□□□ 0.42
RPUSD4-201ENST00000298317 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
RPUSD4-201ENST00000298317 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
RPUSD4-201ENST00000298317 C20orf194Q5TEA3 1177 aa17.65■□□□□ 0.42
RPUSD4-201ENST00000298317 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
RPUSD4-201ENST00000298317 GLIPR1L2Q4G1C9 344 aa17.64■□□□□ 0.41
RPUSD4-201ENST00000298317 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
RPUSD4-201ENST00000298317 PBRM1Q86U86 1689 aa17.63■□□□□ 0.41
RPUSD4-201ENST00000298317 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
RPUSD4-201ENST00000298317 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
RPUSD4-201ENST00000298317 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
RPUSD4-201ENST00000298317 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
RPUSD4-201ENST00000298317 ANKRD30AQ9BXX3 1397 aa17.61■□□□□ 0.41
RPUSD4-201ENST00000298317 RAPGEF6Q8TEU7 1601 aa17.6■□□□□ 0.41
RPUSD4-201ENST00000298317 ZMYND15Q9H091 742 aa17.6■□□□□ 0.41
RPUSD4-201ENST00000298317 KIAA0556O60303 1618 aa17.59■□□□□ 0.41
RPUSD4-201ENST00000298317 TRPM1Q7Z4N2 1603 aa17.59■□□□□ 0.41
RPUSD4-201ENST00000298317 GPATCH8Q9UKJ3 1502 aaKnown RBP17.59■□□□□ 0.41
RPUSD4-201ENST00000298317 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
RPUSD4-201ENST00000298317 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.4
RPUSD4-201ENST00000298317 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.4
RPUSD4-201ENST00000298317 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
RPUSD4-201ENST00000298317 NUP155O75694 1391 aa17.56■□□□□ 0.4
RPUSD4-201ENST00000298317 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
RPUSD4-201ENST00000298317 KDM2AQ9Y2K7 1162 aa17.56■□□□□ 0.4
RPUSD4-201ENST00000298317 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
RPUSD4-201ENST00000298317 PTPRGP23470 1445 aa17.55■□□□□ 0.4
RPUSD4-201ENST00000298317 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
RPUSD4-201ENST00000298317 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
RPUSD4-201ENST00000298317 SHANK2Q9UPX8 1470 aa17.54■□□□□ 0.4
RPUSD4-201ENST00000298317 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
RPUSD4-201ENST00000298317 LAMC1P11047 1609 aa17.54■□□□□ 0.4
RPUSD4-201ENST00000298317 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
RPUSD4-201ENST00000298317 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
RPUSD4-201ENST00000298317 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.4
RPUSD4-201ENST00000298317 VSIG10Q8N0Z9 540 aa17.52■□□□□ 0.39
RPUSD4-201ENST00000298317 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
RPUSD4-201ENST00000298317 USP19O94966 1318 aa17.51■□□□□ 0.39
RPUSD4-201ENST00000298317 ZNF521Q96K83 1311 aa17.51■□□□□ 0.39
RPUSD4-201ENST00000298317 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
RPUSD4-201ENST00000298317 PRDM15P57071 1507 aaPredicted RBP17.5■□□□□ 0.39
RPUSD4-201ENST00000298317 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
RPUSD4-201ENST00000298317 POGKQ9P215 609 aa17.5■□□□□ 0.39
RPUSD4-201ENST00000298317 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
RPUSD4-201ENST00000298317 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
RPUSD4-201ENST00000298317 RGS3P49796 1198 aa17.5■□□□□ 0.39
RPUSD4-201ENST00000298317 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
RPUSD4-201ENST00000298317 RRAGDQ9NQL2 400 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-201ENST00000298317 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
RPUSD4-201ENST00000298317 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
RPUSD4-201ENST00000298317 TESK2Q96S53 571 aa17.48■□□□□ 0.39
RPUSD4-201ENST00000298317 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
RPUSD4-201ENST00000298317 L1TD1Q5T7N2 865 aaKnown RBP17.47■□□□□ 0.39
RPUSD4-201ENST00000298317 PANK3Q9H999 370 aa17.47■□□□□ 0.39
RPUSD4-201ENST00000298317 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
RPUSD4-201ENST00000298317 ERBINQ96RT1 1412 aa17.45■□□□□ 0.38
RPUSD4-201ENST00000298317 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
RPUSD4-201ENST00000298317 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
RPUSD4-201ENST00000298317 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
RPUSD4-201ENST00000298317 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
RPUSD4-201ENST00000298317 BECN1Q14457 450 aa17.42■□□□□ 0.38
RPUSD4-201ENST00000298317 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
RPUSD4-201ENST00000298317 TRMT2AQ8IZ69 625 aaKnown RBP17.42■□□□□ 0.38
RPUSD4-201ENST00000298317 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
RPUSD4-201ENST00000298317 A2MP01023 1474 aa17.41■□□□□ 0.38
RPUSD4-201ENST00000298317 ANTXR1Q9H6X2 564 aa17.41■□□□□ 0.38
RPUSD4-201ENST00000298317 EIF2AK4Q9P2K8 1649 aaKnown RBP17.4■□□□□ 0.38
RPUSD4-201ENST00000298317 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
RPUSD4-201ENST00000298317 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
RPUSD4-201ENST00000298317 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
RPUSD4-201ENST00000298317 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
RPUSD4-201ENST00000298317 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
RPUSD4-201ENST00000298317 TMF1P82094 1093 aa17.38■□□□□ 0.37
RPUSD4-201ENST00000298317 SEC24BO95487 1268 aa17.38■□□□□ 0.37
RPUSD4-201ENST00000298317 IGHDP01880 384 aa17.38■□□□□ 0.37
RPUSD4-201ENST00000298317 MAGI2Q86UL8 1455 aa17.37■□□□□ 0.37
RPUSD4-201ENST00000298317 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
RPUSD4-201ENST00000298317 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
RPUSD4-201ENST00000298317 PLB1Q6P1J6 1458 aa17.36■□□□□ 0.37
RPUSD4-201ENST00000298317 NUP160Q12769 1436 aa17.36■□□□□ 0.37
RPUSD4-201ENST00000298317 ARHGEF5Q12774 1597 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms