RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 MLH3Q9UHC1 1453 aa9.58□□□□□ -0.88
TMC1-201ENST00000297784 FOXD1Q16676 465 aa9.58□□□□□ -0.88
TMC1-201ENST00000297784 COL17A1Q9UMD9 1497 aaPredicted RBP9.57□□□□□ -0.88
TMC1-201ENST00000297784 ERBINQ96RT1 1412 aa9.57□□□□□ -0.88
TMC1-201ENST00000297784 ABCA6Q8N139 1617 aa9.57□□□□□ -0.88
TMC1-201ENST00000297784 HECW2Q9P2P5 1572 aa9.57□□□□□ -0.88
TMC1-201ENST00000297784 MIER1Q8N108 512 aa9.57□□□□□ -0.88
TMC1-201ENST00000297784 MAGI2Q86UL8 1455 aa9.57□□□□□ -0.88
TMC1-201ENST00000297784 DEPDC5O75140 1603 aa9.56□□□□□ -0.88
TMC1-201ENST00000297784 YTHDC1Q96MU7 727 aaKnown RBP9.56□□□□□ -0.88
TMC1-201ENST00000297784 NUP155O75694 1391 aa9.55□□□□□ -0.88
TMC1-201ENST00000297784 FAM135AQ9P2D6 1515 aa9.55□□□□□ -0.88
TMC1-201ENST00000297784 IQGAP3Q86VI3 1631 aa9.54□□□□□ -0.88
TMC1-201ENST00000297784 MROH1Q8NDA8 1641 aa9.54□□□□□ -0.88
TMC1-201ENST00000297784 TEX14Q8IWB6 1497 aa9.54□□□□□ -0.88
TMC1-201ENST00000297784 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
TMC1-201ENST00000297784 ANKRD30BQ9BXX2 1392 aa9.54□□□□□ -0.88
TMC1-201ENST00000297784 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
TMC1-201ENST00000297784 SLC4A1APQ9BWU0 796 aaKnown RBP9.54□□□□□ -0.88
TMC1-201ENST00000297784 EIF2AK4Q9P2K8 1649 aaKnown RBP9.54□□□□□ -0.88
TMC1-201ENST00000297784 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
TMC1-201ENST00000297784 SIGLEC1Q9BZZ2 1709 aa9.53□□□□□ -0.88
TMC1-201ENST00000297784 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
TMC1-201ENST00000297784 BCORL1Q5H9F3 1711 aa9.52□□□□□ -0.88
TMC1-201ENST00000297784 VWDEQ8N2E2 1590 aa9.52□□□□□ -0.89
TMC1-201ENST00000297784 A2MP01023 1474 aa9.51□□□□□ -0.89
TMC1-201ENST00000297784 SUPT16HQ9Y5B9 1047 aaKnown RBP9.51□□□□□ -0.89
TMC1-201ENST00000297784 PKD2Q13563 968 aa9.51□□□□□ -0.89
TMC1-201ENST00000297784 PRDM15P57071 1507 aaPredicted RBP9.5□□□□□ -0.89
TMC1-201ENST00000297784 RNF17Q9BXT8 1623 aaKnown RBP9.5□□□□□ -0.89
TMC1-201ENST00000297784 TSHZ2Q9NRE2 1034 aa9.5□□□□□ -0.89
TMC1-201ENST00000297784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.5□□□□□ -0.89
TMC1-201ENST00000297784 E9PCH4 1651 aa9.49□□□□□ -0.89
TMC1-201ENST00000297784 PLA2R1Q13018 1463 aa9.49□□□□□ -0.89
TMC1-201ENST00000297784 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
TMC1-201ENST00000297784 KIF3BO15066 747 aa9.48□□□□□ -0.89
TMC1-201ENST00000297784 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
TMC1-201ENST00000297784 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
TMC1-201ENST00000297784 CEP152O94986 1710 aa9.47□□□□□ -0.89
TMC1-201ENST00000297784 TET3O43151 1660 aa9.46□□□□□ -0.89
TMC1-201ENST00000297784 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.9
TMC1-201ENST00000297784 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
TMC1-201ENST00000297784 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
TMC1-201ENST00000297784 ATP10AO60312 1499 aa9.45□□□□□ -0.9
TMC1-201ENST00000297784 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
TMC1-201ENST00000297784 LMTK2Q8IWU2 1503 aa9.44□□□□□ -0.9
TMC1-201ENST00000297784 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
TMC1-201ENST00000297784 SPHKAPQ2M3C7 1700 aa9.43□□□□□ -0.9
TMC1-201ENST00000297784 EFCAB6Q5THR3 1501 aa9.43□□□□□ -0.9
TMC1-201ENST00000297784 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
TMC1-201ENST00000297784 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
TMC1-201ENST00000297784 ABCC3O15438 1527 aa9.42□□□□□ -0.9
TMC1-201ENST00000297784 GGT6Q6P531 493 aa9.42□□□□□ -0.9
TMC1-201ENST00000297784 PTPRTO14522 1441 aa9.42□□□□□ -0.9
TMC1-201ENST00000297784 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
TMC1-201ENST00000297784 AGLP35573 1532 aa9.41□□□□□ -0.9
TMC1-201ENST00000297784 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
TMC1-201ENST00000297784 TRPM2O94759 1503 aa9.4□□□□□ -0.9
TMC1-201ENST00000297784 KANK1Q14678 1352 aa9.4□□□□□ -0.9
TMC1-201ENST00000297784 CLTCL1P53675 1640 aa9.4□□□□□ -0.9
TMC1-201ENST00000297784 NPATQ14207 1427 aa9.4□□□□□ -0.9
TMC1-201ENST00000297784 ZC3H13Q5T200 1668 aaKnown RBP9.4□□□□□ -0.91
TMC1-201ENST00000297784 UGGT1Q9NYU2 1555 aa9.39□□□□□ -0.91
TMC1-201ENST00000297784 NBPF8Q3BBV2 869 aa9.38□□□□□ -0.91
TMC1-201ENST00000297784 WASHC2CQ9Y4E1 1318 aa9.38□□□□□ -0.91
TMC1-201ENST00000297784 CCDC144AA2RUR9 1427 aa9.38□□□□□ -0.91
TMC1-201ENST00000297784 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
TMC1-201ENST00000297784 CLTCQ00610 1675 aaKnown RBP9.37□□□□□ -0.91
TMC1-201ENST00000297784 SYNMO15061 1565 aa9.36□□□□□ -0.91
TMC1-201ENST00000297784 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
TMC1-201ENST00000297784 MROH2AA6NES4 1674 aa9.35□□□□□ -0.91
TMC1-201ENST00000297784 PIK3C2BO00750 1634 aa9.35□□□□□ -0.91
TMC1-201ENST00000297784 NOS1P29475 1434 aa9.35□□□□□ -0.91
TMC1-201ENST00000297784 PREX1Q8TCU6 1659 aa9.35□□□□□ -0.91
TMC1-201ENST00000297784 UHRF1BP1Q6BDS2 1440 aa9.34□□□□□ -0.91
TMC1-201ENST00000297784 KIF1BO60333 1816 aa9.34□□□□□ -0.91
TMC1-201ENST00000297784 NEURL4Q96JN8 1562 aa9.33□□□□□ -0.92
TMC1-201ENST00000297784 RGL3Q3MIN7 710 aa9.33□□□□□ -0.92
TMC1-201ENST00000297784 DCAF11Q8TEB1 546 aa9.33□□□□□ -0.92
TMC1-201ENST00000297784 IFT172Q9UG01 1749 aa9.32□□□□□ -0.92
TMC1-201ENST00000297784 MLECQ14165 292 aa9.32□□□□□ -0.92
TMC1-201ENST00000297784 FBXO31Q5XUX0 539 aaPredicted RBP9.32□□□□□ -0.92
TMC1-201ENST00000297784 PPP6R1Q9UPN7 881 aa9.32□□□□□ -0.92
TMC1-201ENST00000297784 CNTLNQ9NXG0 1405 aa9.32□□□□□ -0.92
TMC1-201ENST00000297784 MYO5BQ9ULV0 1848 aa9.32□□□□□ -0.92
TMC1-201ENST00000297784 HIRIP3Q9BW71 556 aaPredicted RBP9.31□□□□□ -0.92
TMC1-201ENST00000297784 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
TMC1-201ENST00000297784 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
TMC1-201ENST00000297784 ADGRB3O60242 1522 aa9.3□□□□□ -0.92
TMC1-201ENST00000297784 PRAG1Q86YV5 1406 aa9.3□□□□□ -0.92
TMC1-201ENST00000297784 ERVK-7P63135 1459 aa9.29□□□□□ -0.92
TMC1-201ENST00000297784 SPATA31D1Q6ZQQ2 1576 aa9.29□□□□□ -0.92
TMC1-201ENST00000297784 MADDQ8WXG6 1647 aa9.29□□□□□ -0.92
TMC1-201ENST00000297784 ZMYM3Q14202 1370 aa9.29□□□□□ -0.92
TMC1-201ENST00000297784 IDI1Q13907 227 aa9.29□□□□□ -0.92
TMC1-201ENST00000297784 PPLO60437 1756 aa9.29□□□□□ -0.92
TMC1-201ENST00000297784 TMEM131LA2VDJ0 1609 aa9.28□□□□□ -0.92
TMC1-201ENST00000297784 ARID4BQ4LE39 1312 aaPredicted RBP9.28□□□□□ -0.92
TMC1-201ENST00000297784 RALGAPBQ86X10 1494 aa9.27□□□□□ -0.92
TMC1-201ENST00000297784 FER1L4A9Z1Z3 1794 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms