RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CDC42BPBQ9Y5S2 1711 aa21.19■□□□□ 0.98
UBAP1-201ENST00000297661 FANCAO15360 1455 aa21.19■□□□□ 0.98
UBAP1-201ENST00000297661 MYO5CQ9NQX4 1742 aa21.18■□□□□ 0.98
UBAP1-201ENST00000297661 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
UBAP1-201ENST00000297661 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
UBAP1-201ENST00000297661 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
UBAP1-201ENST00000297661 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
UBAP1-201ENST00000297661 AFAP1Q8N556 730 aa21.14■□□□□ 0.98
UBAP1-201ENST00000297661 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.98
UBAP1-201ENST00000297661 KIAA1107Q9UPP5 1409 aa21.14■□□□□ 0.97
UBAP1-201ENST00000297661 ANKRD30AQ9BXX3 1397 aa21.14■□□□□ 0.97
UBAP1-201ENST00000297661 USP47Q96K76 1375 aa21.13■□□□□ 0.97
UBAP1-201ENST00000297661 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
UBAP1-201ENST00000297661 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
UBAP1-201ENST00000297661 NUP155O75694 1391 aa21.12■□□□□ 0.97
UBAP1-201ENST00000297661 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
UBAP1-201ENST00000297661 ITSN2Q9NZM3 1697 aa21.11■□□□□ 0.97
UBAP1-201ENST00000297661 SCAPERQ9BY12 1400 aa21.1■□□□□ 0.97
UBAP1-201ENST00000297661 ADGRL1O94910 1474 aa21.09■□□□□ 0.97
UBAP1-201ENST00000297661 SAMD9LQ8IVG5 1584 aa21.08■□□□□ 0.97
UBAP1-201ENST00000297661 ARHGEF12Q9NZN5 1544 aa21.08■□□□□ 0.97
UBAP1-201ENST00000297661 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.97
UBAP1-201ENST00000297661 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
UBAP1-201ENST00000297661 SALL2Q9Y467 1007 aaPredicted RBP21.06■□□□□ 0.96
UBAP1-201ENST00000297661 MBD5Q9P267 1494 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 ZBED9Q6R2W3 1325 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 SYCP2Q9BX26 1530 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 ADGRL2O95490 1459 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
UBAP1-201ENST00000297661 TRAPPC8Q9Y2L5 1435 aa21.05■□□□□ 0.96
UBAP1-201ENST00000297661 DHX29Q7Z478 1369 aaKnown RBP21.05■□□□□ 0.96
UBAP1-201ENST00000297661 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
UBAP1-201ENST00000297661 CROCC2H7BZ55 1655 aa21.05■□□□□ 0.96
UBAP1-201ENST00000297661 DCAF11Q8TEB1 546 aa21.03■□□□□ 0.96
UBAP1-201ENST00000297661 RTL5Q5HYW3 569 aaPredicted RBP21.01■□□□□ 0.95
UBAP1-201ENST00000297661 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
UBAP1-201ENST00000297661 KIF15Q9NS87 1388 aa20.99■□□□□ 0.95
UBAP1-201ENST00000297661 NEO1Q92859 1461 aa20.99■□□□□ 0.95
UBAP1-201ENST00000297661 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
UBAP1-201ENST00000297661 ABCC1P33527 1531 aa20.98■□□□□ 0.95
UBAP1-201ENST00000297661 RGL3Q3MIN7 710 aa20.96■□□□□ 0.95
UBAP1-201ENST00000297661 IPO9Q96P70 1041 aaKnown RBP20.96■□□□□ 0.95
UBAP1-201ENST00000297661 KDM5CP41229 1560 aa20.96■□□□□ 0.95
UBAP1-201ENST00000297661 ANP32AP39687 249 aaKnown RBP20.96■□□□□ 0.95
UBAP1-201ENST00000297661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
UBAP1-201ENST00000297661 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
UBAP1-201ENST00000297661 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.94
UBAP1-201ENST00000297661 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
UBAP1-201ENST00000297661 POGZQ7Z3K3 1410 aa20.92■□□□□ 0.94
UBAP1-201ENST00000297661 SPAG9O60271 1321 aaKnown RBP20.92■□□□□ 0.94
UBAP1-201ENST00000297661 CFAP74Q9C0B2 1584 aa20.92■□□□□ 0.94
UBAP1-201ENST00000297661 ZBTB47Q9UFB7 747 aaPredicted RBP20.92■□□□□ 0.94
UBAP1-201ENST00000297661 YEATS2Q9ULM3 1422 aa20.91■□□□□ 0.94
UBAP1-201ENST00000297661 FRMPD1Q5SYB0 1578 aa20.9■□□□□ 0.94
UBAP1-201ENST00000297661 RALGAPBQ86X10 1494 aa20.9■□□□□ 0.94
UBAP1-201ENST00000297661 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
UBAP1-201ENST00000297661 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.93
UBAP1-201ENST00000297661 RTN4Q9NQC3 1192 aaKnown RBP20.89■□□□□ 0.93
UBAP1-201ENST00000297661 UHRF1BP1Q6BDS2 1440 aa20.89■□□□□ 0.93
UBAP1-201ENST00000297661 RICTORQ6R327 1708 aa20.88■□□□□ 0.93
UBAP1-201ENST00000297661 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
UBAP1-201ENST00000297661 ROCK2O75116 1388 aaKnown RBP20.88■□□□□ 0.93
UBAP1-201ENST00000297661 ZNF518AQ6AHZ1 1483 aa20.88■□□□□ 0.93
UBAP1-201ENST00000297661 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
UBAP1-201ENST00000297661 NBPF1Q3BBV0 1214 aa20.87■□□□□ 0.93
UBAP1-201ENST00000297661 PLEKHH2Q8IVE3 1493 aa20.86■□□□□ 0.93
UBAP1-201ENST00000297661 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
UBAP1-201ENST00000297661 MLECQ14165 292 aa20.84■□□□□ 0.93
UBAP1-201ENST00000297661 SMG6Q86US8 1419 aaKnown RBP20.83■□□□□ 0.93
UBAP1-201ENST00000297661 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
UBAP1-201ENST00000297661 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
UBAP1-201ENST00000297661 KDM5DQ9BY66 1539 aa20.8■□□□□ 0.92
UBAP1-201ENST00000297661 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
UBAP1-201ENST00000297661 KIDINS220Q9ULH0 1771 aa20.79■□□□□ 0.92
UBAP1-201ENST00000297661 RSPH4AQ5TD94 716 aa20.79■□□□□ 0.92
UBAP1-201ENST00000297661 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
UBAP1-201ENST00000297661 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
UBAP1-201ENST00000297661 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
UBAP1-201ENST00000297661 ZFYVE16Q7Z3T8 1539 aa20.77■□□□□ 0.92
UBAP1-201ENST00000297661 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.92
UBAP1-201ENST00000297661 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
UBAP1-201ENST00000297661 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
UBAP1-201ENST00000297661 ABCA6Q8N139 1617 aa20.75■□□□□ 0.91
UBAP1-201ENST00000297661 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
UBAP1-201ENST00000297661 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
UBAP1-201ENST00000297661 PRAG1Q86YV5 1406 aa20.74■□□□□ 0.91
UBAP1-201ENST00000297661 GGT6Q6P531 493 aa20.73■□□□□ 0.91
UBAP1-201ENST00000297661 MLH3Q9UHC1 1453 aa20.73■□□□□ 0.91
UBAP1-201ENST00000297661 KIF3BO15066 747 aa20.72■□□□□ 0.91
UBAP1-201ENST00000297661 SIGLEC1Q9BZZ2 1709 aa20.72■□□□□ 0.91
UBAP1-201ENST00000297661 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
UBAP1-201ENST00000297661 RALBP1Q15311 655 aa20.71■□□□□ 0.91
UBAP1-201ENST00000297661 DIP2CQ9Y2E4 1556 aa20.71■□□□□ 0.91
UBAP1-201ENST00000297661 ZMYM4Q5VZL5 1548 aa20.7■□□□□ 0.9
UBAP1-201ENST00000297661 NEFMP07197 916 aa20.69■□□□□ 0.9
UBAP1-201ENST00000297661 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
UBAP1-201ENST00000297661 A2MP01023 1474 aa20.69■□□□□ 0.9
UBAP1-201ENST00000297661 BRD4O60885 1362 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms