RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
TMEM200A-201ENST00000296978 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
TMEM200A-201ENST00000296978 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
TMEM200A-201ENST00000296978 TNNT2P45379 298 aaPredicted RBP16.4■□□□□ 0.22
TMEM200A-201ENST00000296978 SPATA31E1Q6ZUB1 1445 aa16.4■□□□□ 0.22
TMEM200A-201ENST00000296978 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
TMEM200A-201ENST00000296978 ADAMTS8Q9UP79 889 aa16.4■□□□□ 0.22
TMEM200A-201ENST00000296978 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
TMEM200A-201ENST00000296978 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
TMEM200A-201ENST00000296978 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
TMEM200A-201ENST00000296978 MS4A1P11836 297 aa16.39■□□□□ 0.21
TMEM200A-201ENST00000296978 SAMD9Q5K651 1589 aa16.37■□□□□ 0.21
TMEM200A-201ENST00000296978 CCDC144AA2RUR9 1427 aa16.37■□□□□ 0.21
TMEM200A-201ENST00000296978 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
TMEM200A-201ENST00000296978 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
TMEM200A-201ENST00000296978 TROQ12816 1431 aaPredicted RBP16.35■□□□□ 0.21
TMEM200A-201ENST00000296978 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
TMEM200A-201ENST00000296978 BRPF3Q9ULD4 1205 aa16.35■□□□□ 0.21
TMEM200A-201ENST00000296978 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
TMEM200A-201ENST00000296978 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
TMEM200A-201ENST00000296978 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.21
TMEM200A-201ENST00000296978 SLKQ9H2G2 1235 aaPredicted RBP16.33■□□□□ 0.2
TMEM200A-201ENST00000296978 CARMIL2Q6F5E8 1435 aa16.33■□□□□ 0.2
TMEM200A-201ENST00000296978 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
TMEM200A-201ENST00000296978 PZPP20742 1482 aa16.32■□□□□ 0.2
TMEM200A-201ENST00000296978 GSE1Q14687 1217 aa16.32■□□□□ 0.2
TMEM200A-201ENST00000296978 LRRIQ1Q96JM4 1722 aa16.31■□□□□ 0.2
TMEM200A-201ENST00000296978 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
TMEM200A-201ENST00000296978 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
TMEM200A-201ENST00000296978 APAF1O14727 1248 aa16.31■□□□□ 0.2
TMEM200A-201ENST00000296978 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
TMEM200A-201ENST00000296978 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
TMEM200A-201ENST00000296978 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
TMEM200A-201ENST00000296978 NUP153P49790 1475 aaKnown RBP16.29■□□□□ 0.2
TMEM200A-201ENST00000296978 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
TMEM200A-201ENST00000296978 WDR62O43379 1518 aa16.27■□□□□ 0.2
TMEM200A-201ENST00000296978 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
TMEM200A-201ENST00000296978 CDCA8Q53HL2 280 aa16.27■□□□□ 0.19
TMEM200A-201ENST00000296978 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
TMEM200A-201ENST00000296978 FRAT2O75474 233 aaPredicted RBP16.25■□□□□ 0.19
TMEM200A-201ENST00000296978 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
TMEM200A-201ENST00000296978 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
TMEM200A-201ENST00000296978 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
TMEM200A-201ENST00000296978 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 BCAR3O75815 825 aa16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 BECN1Q14457 450 aa16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
TMEM200A-201ENST00000296978 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
TMEM200A-201ENST00000296978 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
TMEM200A-201ENST00000296978 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
TMEM200A-201ENST00000296978 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
TMEM200A-201ENST00000296978 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
TMEM200A-201ENST00000296978 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
TMEM200A-201ENST00000296978 PANK1Q8TE04 598 aa16.2■□□□□ 0.18
TMEM200A-201ENST00000296978 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
TMEM200A-201ENST00000296978 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
TMEM200A-201ENST00000296978 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
TMEM200A-201ENST00000296978 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
TMEM200A-201ENST00000296978 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
TMEM200A-201ENST00000296978 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
TMEM200A-201ENST00000296978 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
TMEM200A-201ENST00000296978 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
TMEM200A-201ENST00000296978 PTPRGP23470 1445 aa16.15■□□□□ 0.18
TMEM200A-201ENST00000296978 TESK2Q96S53 571 aa16.15■□□□□ 0.18
TMEM200A-201ENST00000296978 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
TMEM200A-201ENST00000296978 WASHC2CQ9Y4E1 1318 aa16.14■□□□□ 0.17
TMEM200A-201ENST00000296978 DISP1Q96F81 1524 aa16.14■□□□□ 0.17
TMEM200A-201ENST00000296978 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
TMEM200A-201ENST00000296978 KDM5CP41229 1560 aa16.12■□□□□ 0.17
TMEM200A-201ENST00000296978 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM200A-201ENST00000296978 E9PSI1 815 aa16.12■□□□□ 0.17
TMEM200A-201ENST00000296978 HSP90AA1P07900 732 aaKnown RBP16.12■□□□□ 0.17
TMEM200A-201ENST00000296978 KIF14Q15058 1648 aa16.12■□□□□ 0.17
TMEM200A-201ENST00000296978 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
TMEM200A-201ENST00000296978 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
TMEM200A-201ENST00000296978 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
TMEM200A-201ENST00000296978 SLFN5Q08AF3 891 aa16.11■□□□□ 0.17
TMEM200A-201ENST00000296978 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
TMEM200A-201ENST00000296978 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
TMEM200A-201ENST00000296978 U2SURPO15042 1029 aaKnown RBP16.1■□□□□ 0.17
TMEM200A-201ENST00000296978 KIF3BO15066 747 aa16.1■□□□□ 0.17
TMEM200A-201ENST00000296978 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
TMEM200A-201ENST00000296978 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
TMEM200A-201ENST00000296978 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
TMEM200A-201ENST00000296978 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
TMEM200A-201ENST00000296978 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
TMEM200A-201ENST00000296978 CFAP70Q5T0N1 1121 aa16.08■□□□□ 0.17
TMEM200A-201ENST00000296978 MBD5Q9P267 1494 aa16.08■□□□□ 0.16
TMEM200A-201ENST00000296978 MFAP1P55081 439 aaKnown RBP16.08■□□□□ 0.16
TMEM200A-201ENST00000296978 TARBP1Q13395 1621 aaKnown RBP16.08■□□□□ 0.16
TMEM200A-201ENST00000296978 IGHDP01880 384 aa16.07■□□□□ 0.16
TMEM200A-201ENST00000296978 U2AF1L5P0DN76 240 aaPredicted RBP16.07■□□□□ 0.16
TMEM200A-201ENST00000296978 U2AF1Q01081 240 aaKnown RBP eCLIP16.07■□□□□ 0.16
TMEM200A-201ENST00000296978 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
TMEM200A-201ENST00000296978 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
TMEM200A-201ENST00000296978 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
TMEM200A-201ENST00000296978 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms