RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 TNRQ92752 1358 aa29.14■■■□□ 2.26
LRPAP1-201ENST00000296325 PZPP20742 1482 aa29.13■■■□□ 2.25
LRPAP1-201ENST00000296325 MBD5Q9P267 1494 aa29.13■■■□□ 2.25
LRPAP1-201ENST00000296325 CCNB3Q8WWL7 1395 aa29.12■■■□□ 2.25
LRPAP1-201ENST00000296325 MED14O60244 1454 aa29.11■■■□□ 2.25
LRPAP1-201ENST00000296325 FBXO31Q5XUX0 539 aaPredicted RBP29.11■■■□□ 2.25
LRPAP1-201ENST00000296325 RTEL1-TNFRSF6BF6WH68 1400 aa29.11■■■□□ 2.25
LRPAP1-201ENST00000296325 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
LRPAP1-201ENST00000296325 DHX29Q7Z478 1369 aaKnown RBP29.1■■■□□ 2.25
LRPAP1-201ENST00000296325 PHF23Q9BUL5 403 aaPredicted RBP29.09■■■□□ 2.25
LRPAP1-201ENST00000296325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.08■■■□□ 2.25
LRPAP1-201ENST00000296325 DEPDC5O75140 1603 aa29.07■■■□□ 2.24
LRPAP1-201ENST00000296325 ANKLE2Q86XL3 938 aa29.07■■■□□ 2.24
LRPAP1-201ENST00000296325 KDM5DQ9BY66 1539 aa29.06■■■□□ 2.24
LRPAP1-201ENST00000296325 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
LRPAP1-201ENST00000296325 NPHP4O75161 1426 aaPredicted RBP29.04■■■□□ 2.24
LRPAP1-201ENST00000296325 NLRP1Q9C000 1473 aa29.04■■■□□ 2.24
LRPAP1-201ENST00000296325 MIA2Q96PC5 1412 aa29.02■■■□□ 2.24
LRPAP1-201ENST00000296325 TIAM1Q13009 1591 aa29.01■■■□□ 2.24
LRPAP1-201ENST00000296325 THEMISQ8N1K5 641 aaPredicted RBP29.01■■■□□ 2.23
LRPAP1-201ENST00000296325 UGGT1Q9NYU2 1555 aa29■■■□□ 2.23
LRPAP1-201ENST00000296325 LRRC7Q96NW7 1537 aa28.99■■■□□ 2.23
LRPAP1-201ENST00000296325 KIF3BO15066 747 aa28.98■■■□□ 2.23
LRPAP1-201ENST00000296325 STRCP1A6NGW2 1772 aa28.98■■■□□ 2.23
LRPAP1-201ENST00000296325 MTUS2Q5JR59 1369 aa28.97■■■□□ 2.23
LRPAP1-201ENST00000296325 IQGAP1P46940 1657 aa28.96■■■□□ 2.23
LRPAP1-201ENST00000296325 RNF17Q9BXT8 1623 aaKnown RBP28.95■■■□□ 2.23
LRPAP1-201ENST00000296325 RGS17Q9UGC6 210 aaPredicted RBP28.94■■■□□ 2.22
LRPAP1-201ENST00000296325 SYNMO15061 1565 aa28.93■■■□□ 2.22
LRPAP1-201ENST00000296325 WASHC2CQ9Y4E1 1318 aa28.93■■■□□ 2.22
LRPAP1-201ENST00000296325 CHIC1Q5VXU3 224 aa28.92■■■□□ 2.22
LRPAP1-201ENST00000296325 CCDC141Q6ZP82 1450 aa28.9■■■□□ 2.22
LRPAP1-201ENST00000296325 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
LRPAP1-201ENST00000296325 EHBP1L1Q8N3D4 1523 aa28.87■■■□□ 2.21
LRPAP1-201ENST00000296325 ZC3H13Q5T200 1668 aaKnown RBP28.84■■■□□ 2.21
LRPAP1-201ENST00000296325 SENP3Q9H4L4 574 aaPredicted RBP28.82■■■□□ 2.2
LRPAP1-201ENST00000296325 RSPH4AQ5TD94 716 aa28.8■■■□□ 2.2
LRPAP1-201ENST00000296325 CAMSAP2Q08AD1 1489 aa28.79■■■□□ 2.2
LRPAP1-201ENST00000296325 ABCC3O15438 1527 aa28.79■■■□□ 2.2
LRPAP1-201ENST00000296325 ERVK-7P63135 1459 aa28.78■■■□□ 2.2
LRPAP1-201ENST00000296325 ARHGEF5Q12774 1597 aa28.74■■■□□ 2.19
LRPAP1-201ENST00000296325 SCAF11Q99590 1463 aaKnown RBP28.73■■■□□ 2.19
LRPAP1-201ENST00000296325 XIRP1Q702N8 1843 aaKnown RBP28.73■■■□□ 2.19
LRPAP1-201ENST00000296325 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
LRPAP1-201ENST00000296325 ARHGAP23Q9P227 1491 aa28.72■■■□□ 2.19
LRPAP1-201ENST00000296325 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
LRPAP1-201ENST00000296325 FAM135BQ49AJ0 1406 aa28.7■■■□□ 2.19
LRPAP1-201ENST00000296325 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
LRPAP1-201ENST00000296325 SLIT1O75093 1534 aa28.69■■■□□ 2.18
LRPAP1-201ENST00000296325 MROH1Q8NDA8 1641 aa28.68■■■□□ 2.18
LRPAP1-201ENST00000296325 LTKP29376 864 aa28.67■■■□□ 2.18
LRPAP1-201ENST00000296325 EIF2AK4Q9P2K8 1649 aaKnown RBP28.64■■■□□ 2.18
LRPAP1-201ENST00000296325 TSPY4P0CV99 314 aa28.63■■■□□ 2.17
LRPAP1-201ENST00000296325 TSPY10P0CW01 314 aa28.63■■■□□ 2.17
LRPAP1-201ENST00000296325 MAST1Q9Y2H9 1570 aa28.62■■■□□ 2.17
LRPAP1-201ENST00000296325 TXNDC2Q86VQ3 553 aa28.59■■■□□ 2.17
LRPAP1-201ENST00000296325 CEP152O94986 1710 aa28.56■■■□□ 2.16
LRPAP1-201ENST00000296325 ARHGAP31Q2M1Z3 1444 aa28.55■■■□□ 2.16
LRPAP1-201ENST00000296325 TMEM94Q12767 1356 aa28.54■■■□□ 2.16
LRPAP1-201ENST00000296325 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
LRPAP1-201ENST00000296325 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
LRPAP1-201ENST00000296325 ROBO1Q9Y6N7 1651 aa28.52■■■□□ 2.16
LRPAP1-201ENST00000296325 TMEM2Q9UHN6 1383 aa28.5■■■□□ 2.15
LRPAP1-201ENST00000296325 EID1Q9Y6B2 187 aa28.49■■■□□ 2.15
LRPAP1-201ENST00000296325 PRDM15P57071 1507 aaPredicted RBP28.48■■■□□ 2.15
LRPAP1-201ENST00000296325 SETD1AO15047 1707 aaKnown RBP28.48■■■□□ 2.15
LRPAP1-201ENST00000296325 PIK3C2BO00750 1634 aa28.46■■■□□ 2.15
LRPAP1-201ENST00000296325 LRRC9Q6ZRR7 1453 aa28.46■■■□□ 2.15
LRPAP1-201ENST00000296325 DUOX2Q9NRD8 1548 aa28.45■■■□□ 2.15
LRPAP1-201ENST00000296325 KCNA6P17658 529 aa28.45■■■□□ 2.14
LRPAP1-201ENST00000296325 TET3O43151 1660 aa28.45■■■□□ 2.14
LRPAP1-201ENST00000296325 KDM5AP29375 1690 aaKnown RBP28.42■■■□□ 2.14
LRPAP1-201ENST00000296325 NKTRP30414 1462 aaKnown RBP28.4■■■□□ 2.14
LRPAP1-201ENST00000296325 NWD1Q149M9 1564 aa28.4■■■□□ 2.14
LRPAP1-201ENST00000296325 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
LRPAP1-201ENST00000296325 PROSER2Q86WR7 435 aaPredicted RBP28.37■■■□□ 2.13
LRPAP1-201ENST00000296325 JCADQ9P266 1359 aa28.37■■■□□ 2.13
LRPAP1-201ENST00000296325 RBM33Q96EV2 1170 aaKnown RBP28.36■■■□□ 2.13
LRPAP1-201ENST00000296325 ERBINQ96RT1 1412 aa28.35■■■□□ 2.13
LRPAP1-201ENST00000296325 SLC26A8Q96RN1 970 aa28.34■■■□□ 2.13
LRPAP1-201ENST00000296325 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
LRPAP1-201ENST00000296325 KIF15Q9NS87 1388 aa28.33■■■□□ 2.13
LRPAP1-201ENST00000296325 PHLPP1O60346 1717 aa28.32■■■□□ 2.12
LRPAP1-201ENST00000296325 IDI1Q13907 227 aa28.32■■■□□ 2.12
LRPAP1-201ENST00000296325 SLAIN2Q9P270 581 aa28.31■■■□□ 2.12
LRPAP1-201ENST00000296325 MSH6P52701 1360 aa28.31■■■□□ 2.12
LRPAP1-201ENST00000296325 COL16A1Q07092 1604 aaPredicted RBP28.3■■■□□ 2.12
LRPAP1-201ENST00000296325 LMTK2Q8IWU2 1503 aa28.29■■■□□ 2.12
LRPAP1-201ENST00000296325 UPF1Q92900 1129 aaKnown RBP eCLIP28.29■■■□□ 2.122e-33■■■■■ 71.8
LRPAP1-201ENST00000296325 STAG3Q9UJ98 1225 aa28.29■■■□□ 2.12
LRPAP1-201ENST00000296325 SRCAPQ6ZRS2 3230 aa28.28■■■□□ 2.12
LRPAP1-201ENST00000296325 LRP6O75581 1613 aa28.28■■■□□ 2.12
LRPAP1-201ENST00000296325 NOS1P29475 1434 aa28.26■■■□□ 2.11
LRPAP1-201ENST00000296325 FGD6Q6ZV73 1430 aa28.25■■■□□ 2.11
LRPAP1-201ENST00000296325 ADGRB3O60242 1522 aa28.24■■■□□ 2.11
LRPAP1-201ENST00000296325 ABCC5O15440 1437 aa28.23■■■□□ 2.11
LRPAP1-201ENST00000296325 SPATA31A6Q5VVP1 1343 aa28.22■■■□□ 2.11
LRPAP1-201ENST00000296325 CROCC2H7BZ55 1655 aa28.22■■■□□ 2.11
LRPAP1-201ENST00000296325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.21■■■□□ 2.115e-8■■□□□ 12.7
LRPAP1-201ENST00000296325 RRP7BPQ9NSQ0 103 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms