RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PPRC1Q5VV67 1664 aaKnown RBP32.9■■■□□ 2.86
PTX3-201ENST00000295927 DHX29Q7Z478 1369 aaKnown RBP32.89■■■□□ 2.86
PTX3-201ENST00000295927 KIF13AQ9H1H9 1805 aa32.89■■■□□ 2.86
PTX3-201ENST00000295927 RICTORQ6R327 1708 aa32.88■■■□□ 2.85
PTX3-201ENST00000295927 EIF2AK4Q9P2K8 1649 aaKnown RBP32.88■■■□□ 2.85
PTX3-201ENST00000295927 DEPDC5O75140 1603 aa32.87■■■□□ 2.85
PTX3-201ENST00000295927 RAPGEF3O95398 923 aa32.86■■■□□ 2.85
PTX3-201ENST00000295927 TEX14Q8IWB6 1497 aa32.81■■■□□ 2.84
PTX3-201ENST00000295927 A2MP01023 1474 aa32.8■■■□□ 2.84
PTX3-201ENST00000295927 ABCA6Q8N139 1617 aa32.8■■■□□ 2.84
PTX3-201ENST00000295927 L3MBTL2Q969R5 705 aa32.79■■■□□ 2.84
PTX3-201ENST00000295927 KIF3BO15066 747 aa32.78■■■□□ 2.84
PTX3-201ENST00000295927 FRMPD1Q5SYB0 1578 aa32.77■■■□□ 2.84
PTX3-201ENST00000295927 MROH1Q8NDA8 1641 aa32.73■■■□□ 2.83
PTX3-201ENST00000295927 VWDEQ8N2E2 1590 aa32.73■■■□□ 2.83
PTX3-201ENST00000295927 PRDM15P57071 1507 aaPredicted RBP32.72■■■□□ 2.83
PTX3-201ENST00000295927 DIP2CQ9Y2E4 1556 aa32.71■■■□□ 2.83
PTX3-201ENST00000295927 KANK1Q14678 1352 aa32.7■■■□□ 2.83
PTX3-201ENST00000295927 RNF17Q9BXT8 1623 aaKnown RBP32.68■■■□□ 2.82
PTX3-201ENST00000295927 E9PCH4 1651 aa32.68■■■□□ 2.82
PTX3-201ENST00000295927 PLA2R1Q13018 1463 aa32.68■■■□□ 2.82
PTX3-201ENST00000295927 DIEXFQ68CQ4 756 aaKnown RBP32.68■■■□□ 2.82
PTX3-201ENST00000295927 TET3O43151 1660 aa32.68■■■□□ 2.82
PTX3-201ENST00000295927 ZMYM4Q5VZL5 1548 aa32.67■■■□□ 2.82
PTX3-201ENST00000295927 BCORL1Q5H9F3 1711 aa32.67■■■□□ 2.82
PTX3-201ENST00000295927 ATP10AO60312 1499 aa32.63■■■□□ 2.81
PTX3-201ENST00000295927 YEATS2Q9ULM3 1422 aa32.63■■■□□ 2.81
PTX3-201ENST00000295927 CCDC144AA2RUR9 1427 aa32.62■■■□□ 2.81
PTX3-201ENST00000295927 CEP152O94986 1710 aa32.56■■■□□ 2.8
PTX3-201ENST00000295927 SPHKAPQ2M3C7 1700 aa32.55■■■□□ 2.8
PTX3-201ENST00000295927 NBPF8Q3BBV2 869 aa32.55■■■□□ 2.8
PTX3-201ENST00000295927 LMTK2Q8IWU2 1503 aa32.54■■■□□ 2.8
PTX3-201ENST00000295927 EFCAB6Q5THR3 1501 aa32.52■■■□□ 2.8
PTX3-201ENST00000295927 GGT6Q6P531 493 aa32.51■■■□□ 2.8
PTX3-201ENST00000295927 COL17A1Q9UMD9 1497 aaPredicted RBP32.51■■■□□ 2.79
PTX3-201ENST00000295927 TRPM2O94759 1503 aa32.51■■■□□ 2.79
PTX3-201ENST00000295927 PTPRTO14522 1441 aa32.51■■■□□ 2.79
PTX3-201ENST00000295927 HIRIP3Q9BW71 556 aaPredicted RBP32.43■■■□□ 2.78
PTX3-201ENST00000295927 UHRF1BP1Q6BDS2 1440 aa32.43■■■□□ 2.78
PTX3-201ENST00000295927 ABCC3O15438 1527 aa32.43■■■□□ 2.78
PTX3-201ENST00000295927 REREQ9P2R6 1566 aa32.42■■■□□ 2.78
PTX3-201ENST00000295927 CLTCL1P53675 1640 aa32.41■■■□□ 2.78
PTX3-201ENST00000295927 DCAF11Q8TEB1 546 aa32.41■■■□□ 2.78
PTX3-201ENST00000295927 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
PTX3-201ENST00000295927 RGL3Q3MIN7 710 aa32.39■■■□□ 2.78
PTX3-201ENST00000295927 ZNF326Q5BKZ1 582 aaKnown RBP32.39■■■□□ 2.78
PTX3-201ENST00000295927 DNAJC5Q9H3Z4 198 aa32.39■■■□□ 2.78
PTX3-201ENST00000295927 KDM2AQ9Y2K7 1162 aa32.38■■■□□ 2.77
PTX3-201ENST00000295927 CAMSAP1Q5T5Y3 1602 aa32.37■■■□□ 2.77
PTX3-201ENST00000295927 ZC3H13Q5T200 1668 aaKnown RBP32.36■■■□□ 2.77
PTX3-201ENST00000295927 SPATA31E1Q6ZUB1 1445 aa32.36■■■□□ 2.77
PTX3-201ENST00000295927 ARHGEF40Q8TER5 1519 aa32.35■■■□□ 2.77
PTX3-201ENST00000295927 NPATQ14207 1427 aa32.35■■■□□ 2.77
PTX3-201ENST00000295927 HSPA5P11021 654 aaKnown RBP32.34■■■□□ 2.77
PTX3-201ENST00000295927 EIF4G2P78344 907 aaKnown RBP eCLIP32.34■■■□□ 2.77
PTX3-201ENST00000295927 AGLP35573 1532 aa32.33■■■□□ 2.77
PTX3-201ENST00000295927 CFAP65Q6ZU64 1925 aaKnown RBP32.32■■■□□ 2.76
PTX3-201ENST00000295927 RALGAPBQ86X10 1494 aa32.31■■■□□ 2.76
PTX3-201ENST00000295927 SIGLEC1Q9BZZ2 1709 aa32.3■■■□□ 2.76
PTX3-201ENST00000295927 UGGT1Q9NYU2 1555 aa32.29■■■□□ 2.76
PTX3-201ENST00000295927 TRHP20396 242 aaPredicted RBP32.28■■■□□ 2.76
PTX3-201ENST00000295927 PRAG1Q86YV5 1406 aa32.27■■■□□ 2.76
PTX3-201ENST00000295927 KIF1BO60333 1816 aa32.26■■■□□ 2.76
PTX3-201ENST00000295927 NEURL4Q96JN8 1562 aa32.25■■■□□ 2.75
PTX3-201ENST00000295927 ARHGAP31Q2M1Z3 1444 aa32.23■■■□□ 2.75
PTX3-201ENST00000295927 TRPM1Q7Z4N2 1603 aa32.23■■■□□ 2.75
PTX3-201ENST00000295927 CNTLNQ9NXG0 1405 aa32.22■■■□□ 2.75
PTX3-201ENST00000295927 NOS1P29475 1434 aa32.19■■■□□ 2.74
PTX3-201ENST00000295927 MIER1Q8N108 512 aa32.17■■■□□ 2.74
PTX3-201ENST00000295927 MROH2AA6NES4 1674 aa32.16■■■□□ 2.74
PTX3-201ENST00000295927 DDX10Q13206 875 aaKnown RBP32.16■■■□□ 2.74
PTX3-201ENST00000295927 PPP6R1Q9UPN7 881 aa32.16■■■□□ 2.74
PTX3-201ENST00000295927 USP47Q96K76 1375 aa32.15■■■□□ 2.74
PTX3-201ENST00000295927 CARD11Q9BXL7 1154 aa32.14■■■□□ 2.74
PTX3-201ENST00000295927 SYNMO15061 1565 aa32.14■■■□□ 2.74
PTX3-201ENST00000295927 ROCK2O75116 1388 aaKnown RBP32.13■■■□□ 2.73
PTX3-201ENST00000295927 MADDQ8WXG6 1647 aa32.12■■■□□ 2.73
PTX3-201ENST00000295927 ADGRB3O60242 1522 aa32.12■■■□□ 2.73
PTX3-201ENST00000295927 STAC3Q96MF2 364 aa32.12■■■□□ 2.73
PTX3-201ENST00000295927 CLTCQ00610 1675 aaKnown RBP32.12■■■□□ 2.73
PTX3-201ENST00000295927 PIK3C2BO00750 1634 aa32.11■■■□□ 2.73
PTX3-201ENST00000295927 PREX1Q8TCU6 1659 aa32.11■■■□□ 2.73
PTX3-201ENST00000295927 IFT172Q9UG01 1749 aa32.09■■■□□ 2.73
PTX3-201ENST00000295927 MLECQ14165 292 aa32.08■■■□□ 2.73
PTX3-201ENST00000295927 WASHC2AQ641Q2 1341 aa32.07■■■□□ 2.72
PTX3-201ENST00000295927 POLR1AO95602 1720 aaPredicted RBP32.06■■■□□ 2.72
PTX3-201ENST00000295927 GPRASP1Q5JY77 1395 aa32.06■■■□□ 2.72
PTX3-201ENST00000295927 LAMC1P11047 1609 aa32.06■■■□□ 2.72
PTX3-201ENST00000295927 NBPF1Q3BBV0 1214 aa32.06■■■□□ 2.72
PTX3-201ENST00000295927 C11orf95C9JLR9 678 aaPredicted RBP32.04■■■□□ 2.72
PTX3-201ENST00000295927 CHGAP10645 457 aaKnown RBP32.04■■■□□ 2.72
PTX3-201ENST00000295927 MYOM2P54296 1465 aa32.02■■■□□ 2.72
PTX3-201ENST00000295927 CCDC7Q96M83 1385 aa31.99■■■□□ 2.71
PTX3-201ENST00000295927 ARID4BQ4LE39 1312 aaPredicted RBP31.99■■■□□ 2.71
PTX3-201ENST00000295927 ERVK-7P63135 1459 aa31.99■■■□□ 2.71
PTX3-201ENST00000295927 PPLO60437 1756 aa31.98■■■□□ 2.71
PTX3-201ENST00000295927 FBXO31Q5XUX0 539 aaPredicted RBP31.98■■■□□ 2.71
PTX3-201ENST00000295927 SLC52A1Q9NWF4 448 aa31.98■■■□□ 2.71
PTX3-201ENST00000295927 IDI1Q13907 227 aa31.96■■■□□ 2.71
PTX3-201ENST00000295927 KIAA1210Q9ULL0 1709 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms