RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 AFAP1Q8N556 730 aa20.83■□□□□ 0.93
CCDC116-201ENST00000292779 MAP3K4Q9Y6R4 1608 aa20.83■□□□□ 0.92
CCDC116-201ENST00000292779 TSPOAP1O95153 1857 aa20.81■□□□□ 0.92
CCDC116-201ENST00000292779 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
CCDC116-201ENST00000292779 BCORL1Q5H9F3 1711 aa20.8■□□□□ 0.92
CCDC116-201ENST00000292779 FAM69CQ0P6D2 419 aa20.8■□□□□ 0.92
CCDC116-201ENST00000292779 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
CCDC116-201ENST00000292779 USP47Q96K76 1375 aa20.8■□□□□ 0.92
CCDC116-201ENST00000292779 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
CCDC116-201ENST00000292779 KDM5CP41229 1560 aa20.78■□□□□ 0.92
CCDC116-201ENST00000292779 KIF13AQ9H1H9 1805 aa20.78■□□□□ 0.92
CCDC116-201ENST00000292779 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
CCDC116-201ENST00000292779 GLI2P10070 1586 aa20.77■□□□□ 0.92
CCDC116-201ENST00000292779 MAST1Q9Y2H9 1570 aa20.77■□□□□ 0.92
CCDC116-201ENST00000292779 UHRF1BP1Q6BDS2 1440 aa20.76■□□□□ 0.91
CCDC116-201ENST00000292779 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
CCDC116-201ENST00000292779 PPRC1Q5VV67 1664 aaKnown RBP20.76■□□□□ 0.91
CCDC116-201ENST00000292779 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
CCDC116-201ENST00000292779 FAM9BQ8IZU0 186 aa20.74■□□□□ 0.91
CCDC116-201ENST00000292779 FAM135AQ9P2D6 1515 aa20.72■□□□□ 0.91
CCDC116-201ENST00000292779 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
CCDC116-201ENST00000292779 DHX29Q7Z478 1369 aaKnown RBP20.7■□□□□ 0.9
CCDC116-201ENST00000292779 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
CCDC116-201ENST00000292779 PLXNC1O60486 1568 aa20.7■□□□□ 0.9
CCDC116-201ENST00000292779 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
CCDC116-201ENST00000292779 SPAG9O60271 1321 aaKnown RBP20.69■□□□□ 0.9
CCDC116-201ENST00000292779 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
CCDC116-201ENST00000292779 INO80Q9ULG1 1556 aaPredicted RBP20.68■□□□□ 0.9
CCDC116-201ENST00000292779 RAPGEF3O95398 923 aa20.68■□□□□ 0.9
CCDC116-201ENST00000292779 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
CCDC116-201ENST00000292779 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
CCDC116-201ENST00000292779 ARID4BQ4LE39 1312 aaPredicted RBP20.68■□□□□ 0.9
CCDC116-201ENST00000292779 DCAF11Q8TEB1 546 aa20.67■□□□□ 0.9
CCDC116-201ENST00000292779 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
CCDC116-201ENST00000292779 ATP7AQ04656 1500 aa20.65■□□□□ 0.9
CCDC116-201ENST00000292779 POGZQ7Z3K3 1410 aa20.65■□□□□ 0.9
CCDC116-201ENST00000292779 NEO1Q92859 1461 aa20.65■□□□□ 0.9
CCDC116-201ENST00000292779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC116-201ENST00000292779 UNC13BO14795 1591 aa20.64■□□□□ 0.9
CCDC116-201ENST00000292779 ZBED9Q6R2W3 1325 aa20.63■□□□□ 0.89
CCDC116-201ENST00000292779 RICTORQ6R327 1708 aa20.63■□□□□ 0.89
CCDC116-201ENST00000292779 IRX6P78412 446 aaPredicted RBP20.62■□□□□ 0.89
CCDC116-201ENST00000292779 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
CCDC116-201ENST00000292779 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
CCDC116-201ENST00000292779 RTEL1-TNFRSF6BF6WH68 1400 aa20.61■□□□□ 0.89
CCDC116-201ENST00000292779 ZNF518AQ6AHZ1 1483 aa20.61■□□□□ 0.89
CCDC116-201ENST00000292779 FRMPD1Q5SYB0 1578 aa20.61■□□□□ 0.89
CCDC116-201ENST00000292779 DUOX2Q9NRD8 1548 aa20.6■□□□□ 0.89
CCDC116-201ENST00000292779 ROCK2O75116 1388 aaKnown RBP20.6■□□□□ 0.89
CCDC116-201ENST00000292779 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
CCDC116-201ENST00000292779 MYT1LQ9UL68 1186 aa20.59■□□□□ 0.89
CCDC116-201ENST00000292779 PLA2R1Q13018 1463 aa20.59■□□□□ 0.89
CCDC116-201ENST00000292779 IQGAP3Q86VI3 1631 aa20.57■□□□□ 0.88
CCDC116-201ENST00000292779 TRPM1Q7Z4N2 1603 aa20.57■□□□□ 0.88
CCDC116-201ENST00000292779 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
CCDC116-201ENST00000292779 RGL3Q3MIN7 710 aa20.56■□□□□ 0.88
CCDC116-201ENST00000292779 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
CCDC116-201ENST00000292779 PRAG1Q86YV5 1406 aa20.55■□□□□ 0.88
CCDC116-201ENST00000292779 ERBINQ96RT1 1412 aa20.55■□□□□ 0.88
CCDC116-201ENST00000292779 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
CCDC116-201ENST00000292779 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
CCDC116-201ENST00000292779 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
CCDC116-201ENST00000292779 E9PCH4 1651 aa20.52■□□□□ 0.88
CCDC116-201ENST00000292779 YEATS2Q9ULM3 1422 aa20.52■□□□□ 0.88
CCDC116-201ENST00000292779 MYT1Q01538 1121 aa20.52■□□□□ 0.88
CCDC116-201ENST00000292779 A2MP01023 1474 aa20.51■□□□□ 0.87
CCDC116-201ENST00000292779 ERICH6BQ5W0A0 696 aa20.51■□□□□ 0.87
CCDC116-201ENST00000292779 NBPF1Q3BBV0 1214 aa20.48■□□□□ 0.87
CCDC116-201ENST00000292779 DIP2CQ9Y2E4 1556 aa20.48■□□□□ 0.87
CCDC116-201ENST00000292779 RBM19Q9Y4C8 960 aaKnown RBP20.48■□□□□ 0.87
CCDC116-201ENST00000292779 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
CCDC116-201ENST00000292779 ATP10AO60312 1499 aa20.47■□□□□ 0.87
CCDC116-201ENST00000292779 KIF3BO15066 747 aa20.47■□□□□ 0.87
CCDC116-201ENST00000292779 PNISRQ8TF01 805 aaKnown RBP20.46■□□□□ 0.87
CCDC116-201ENST00000292779 DEPDC5O75140 1603 aa20.46■□□□□ 0.87
CCDC116-201ENST00000292779 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
CCDC116-201ENST00000292779 PPP4R2Q9NY27 417 aa20.45■□□□□ 0.86
CCDC116-201ENST00000292779 GPRASP1Q5JY77 1395 aa20.45■□□□□ 0.86
CCDC116-201ENST00000292779 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
CCDC116-201ENST00000292779 LAMC1P11047 1609 aa20.44■□□□□ 0.86
CCDC116-201ENST00000292779 SMG6Q86US8 1419 aaKnown RBP20.44■□□□□ 0.86
CCDC116-201ENST00000292779 SIGLEC1Q9BZZ2 1709 aa20.43■□□□□ 0.86
CCDC116-201ENST00000292779 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
CCDC116-201ENST00000292779 PRDM15P57071 1507 aaPredicted RBP20.42■□□□□ 0.86
CCDC116-201ENST00000292779 ZMYM4Q5VZL5 1548 aa20.42■□□□□ 0.86
CCDC116-201ENST00000292779 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
CCDC116-201ENST00000292779 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
CCDC116-201ENST00000292779 RALBP1Q15311 655 aa20.41■□□□□ 0.86
CCDC116-201ENST00000292779 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
CCDC116-201ENST00000292779 VWDEQ8N2E2 1590 aa20.39■□□□□ 0.85
CCDC116-201ENST00000292779 NUDCQ9Y266 331 aa20.38■□□□□ 0.85
CCDC116-201ENST00000292779 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
CCDC116-201ENST00000292779 LRPPRCP42704 1394 aaKnown RBP20.38■□□□□ 0.85
CCDC116-201ENST00000292779 CEP152O94986 1710 aa20.37■□□□□ 0.85
CCDC116-201ENST00000292779 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
CCDC116-201ENST00000292779 TESK2Q96S53 571 aa20.36■□□□□ 0.85
CCDC116-201ENST00000292779 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
CCDC116-201ENST00000292779 GGT6Q6P531 493 aa20.34■□□□□ 0.85
CCDC116-201ENST00000292779 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
CCDC116-201ENST00000292779 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms