RNA–Protein interactions for RNA: ENST00000290294.4

PRAC1-201, Transcript of PRAC1 small nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAC1, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1-201ENST00000290294 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
PRAC1-201ENST00000290294 LTBP4Q8N2S1 1624 aa12.57□□□□□ -0.4
PRAC1-201ENST00000290294 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
PRAC1-201ENST00000290294 KIF3BO15066 747 aa12.56□□□□□ -0.4
PRAC1-201ENST00000290294 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
PRAC1-201ENST00000290294 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
PRAC1-201ENST00000290294 TOM1O60784 492 aa12.55□□□□□ -0.4
PRAC1-201ENST00000290294 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
PRAC1-201ENST00000290294 CLTCQ00610 1675 aaKnown RBP12.54□□□□□ -0.4
PRAC1-201ENST00000290294 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
PRAC1-201ENST00000290294 ZNF335Q9H4Z2 1342 aaPredicted RBP12.54□□□□□ -0.4
PRAC1-201ENST00000290294 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
PRAC1-201ENST00000290294 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
PRAC1-201ENST00000290294 INO80Q9ULG1 1556 aaPredicted RBP12.53□□□□□ -0.4
PRAC1-201ENST00000290294 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
PRAC1-201ENST00000290294 A2ML1A8K2U0 1454 aa12.52□□□□□ -0.41
PRAC1-201ENST00000290294 TCOF1Q13428 1488 aaKnown RBP12.52□□□□□ -0.41
PRAC1-201ENST00000290294 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
PRAC1-201ENST00000290294 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
PRAC1-201ENST00000290294 CEP170BQ9Y4F5 1589 aaPredicted RBP12.52□□□□□ -0.41
PRAC1-201ENST00000290294 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
PRAC1-201ENST00000290294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRAC1-201ENST00000290294 TNRQ92752 1358 aa12.5□□□□□ -0.41
PRAC1-201ENST00000290294 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
PRAC1-201ENST00000290294 ZNF142P52746 1687 aaPredicted RBP12.5□□□□□ -0.41
PRAC1-201ENST00000290294 MYO3AQ8NEV4 1616 aa12.49□□□□□ -0.41
PRAC1-201ENST00000290294 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
PRAC1-201ENST00000290294 CCDC141Q6ZP82 1450 aa12.48□□□□□ -0.41
PRAC1-201ENST00000290294 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
PRAC1-201ENST00000290294 MIA2Q96PC5 1412 aa12.47□□□□□ -0.41
PRAC1-201ENST00000290294 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
PRAC1-201ENST00000290294 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
PRAC1-201ENST00000290294 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
PRAC1-201ENST00000290294 DNMT1P26358 1616 aaKnown RBP12.46□□□□□ -0.41
PRAC1-201ENST00000290294 CPS1P31327 1500 aa12.46□□□□□ -0.42
PRAC1-201ENST00000290294 PZPP20742 1482 aa12.46□□□□□ -0.42
PRAC1-201ENST00000290294 NLRP1Q9C000 1473 aa12.46□□□□□ -0.42
PRAC1-201ENST00000290294 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
PRAC1-201ENST00000290294 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
PRAC1-201ENST00000290294 SHANK2Q9UPX8 1470 aa12.44□□□□□ -0.42
PRAC1-201ENST00000290294 CAMSAP2Q08AD1 1489 aa12.43□□□□□ -0.42
PRAC1-201ENST00000290294 CAPN15O75808 1086 aa12.43□□□□□ -0.42
PRAC1-201ENST00000290294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRAC1-201ENST00000290294 APLP2Q06481 763 aa12.42□□□□□ -0.42
PRAC1-201ENST00000290294 HSPA1LP34931 641 aa12.41□□□□□ -0.42
PRAC1-201ENST00000290294 UGGT1Q9NYU2 1555 aa12.41□□□□□ -0.42
PRAC1-201ENST00000290294 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
PRAC1-201ENST00000290294 NPHP4O75161 1426 aaPredicted RBP12.4□□□□□ -0.42
PRAC1-201ENST00000290294 EID1Q9Y6B2 187 aa12.4□□□□□ -0.42
PRAC1-201ENST00000290294 MED14O60244 1454 aa12.4□□□□□ -0.43
PRAC1-201ENST00000290294 POLR1AO95602 1720 aaPredicted RBP12.39□□□□□ -0.43
PRAC1-201ENST00000290294 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
PRAC1-201ENST00000290294 DEPDC5O75140 1603 aa12.37□□□□□ -0.43
PRAC1-201ENST00000290294 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
PRAC1-201ENST00000290294 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
PRAC1-201ENST00000290294 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
PRAC1-201ENST00000290294 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
PRAC1-201ENST00000290294 KANK1Q14678 1352 aa12.34□□□□□ -0.43
PRAC1-201ENST00000290294 MAP3K1Q13233 1512 aa12.34□□□□□ -0.43
PRAC1-201ENST00000290294 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
PRAC1-201ENST00000290294 ZC3H13Q5T200 1668 aaKnown RBP12.34□□□□□ -0.43
PRAC1-201ENST00000290294 NEURL4Q96JN8 1562 aa12.34□□□□□ -0.43
PRAC1-201ENST00000290294 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
PRAC1-201ENST00000290294 EIF2AK4Q9P2K8 1649 aaKnown RBP12.33□□□□□ -0.44
PRAC1-201ENST00000290294 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
PRAC1-201ENST00000290294 ABCC3O15438 1527 aa12.32□□□□□ -0.44
PRAC1-201ENST00000290294 VWDEQ8N2E2 1590 aa12.31□□□□□ -0.44
PRAC1-201ENST00000290294 RNF17Q9BXT8 1623 aaKnown RBP12.31□□□□□ -0.44
PRAC1-201ENST00000290294 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
PRAC1-201ENST00000290294 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
PRAC1-201ENST00000290294 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
PRAC1-201ENST00000290294 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
PRAC1-201ENST00000290294 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
PRAC1-201ENST00000290294 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
PRAC1-201ENST00000290294 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
PRAC1-201ENST00000290294 KIF15Q9NS87 1388 aa12.29□□□□□ -0.44
PRAC1-201ENST00000290294 SCAF11Q99590 1463 aaKnown RBP12.28□□□□□ -0.44
PRAC1-201ENST00000290294 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
PRAC1-201ENST00000290294 LTKP29376 864 aa12.28□□□□□ -0.44
PRAC1-201ENST00000290294 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
PRAC1-201ENST00000290294 MED1Q15648 1581 aaPredicted RBP12.27□□□□□ -0.44
PRAC1-201ENST00000290294 SLC52A1Q9NWF4 448 aa12.27□□□□□ -0.45
PRAC1-201ENST00000290294 ANKRD30AQ9BXX3 1397 aa12.27□□□□□ -0.45
PRAC1-201ENST00000290294 CFAP65Q6ZU64 1925 aaKnown RBP12.27□□□□□ -0.45
PRAC1-201ENST00000290294 KCNA6P17658 529 aa12.26□□□□□ -0.45
PRAC1-201ENST00000290294 BCANQ96GW7 911 aa12.26□□□□□ -0.45
PRAC1-201ENST00000290294 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
PRAC1-201ENST00000290294 TMEM2Q9UHN6 1383 aa12.25□□□□□ -0.45
PRAC1-201ENST00000290294 SLIT1O75093 1534 aa12.25□□□□□ -0.45
PRAC1-201ENST00000290294 SYNMO15061 1565 aa12.25□□□□□ -0.45
PRAC1-201ENST00000290294 IDI1Q13907 227 aa12.24□□□□□ -0.45
PRAC1-201ENST00000290294 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
PRAC1-201ENST00000290294 UBR1Q8IWV7 1749 aa12.24□□□□□ -0.45
PRAC1-201ENST00000290294 ARHGAP23Q9P227 1491 aa12.24□□□□□ -0.45
PRAC1-201ENST00000290294 ABCC5O15440 1437 aa12.23□□□□□ -0.45
PRAC1-201ENST00000290294 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
PRAC1-201ENST00000290294 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
PRAC1-201ENST00000290294 CEP152O94986 1710 aa12.22□□□□□ -0.45
PRAC1-201ENST00000290294 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.46
PRAC1-201ENST00000290294 DAPK1P53355 1430 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms