RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 RDXP35241 583 aaKnown RBP5.47□□□□□ -1.53
NCOA1-201ENST00000288599 WDR97A6NE52 1622 aa5.47□□□□□ -1.53
NCOA1-201ENST00000288599 TMC1Q8TDI8 760 aa5.47□□□□□ -1.53
NCOA1-201ENST00000288599 DDX10Q13206 875 aaKnown RBP5.47□□□□□ -1.53
NCOA1-201ENST00000288599 DENND4BO75064 1496 aaPredicted RBP5.46□□□□□ -1.53
NCOA1-201ENST00000288599 KCNA4P22459 653 aa5.46□□□□□ -1.53
NCOA1-201ENST00000288599 NOC2LQ9Y3T9 749 aaKnown RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
NCOA1-201ENST00000288599 LRRIQ1Q96JM4 1722 aa5.46□□□□□ -1.54
NCOA1-201ENST00000288599 PAK3O75914 559 aaPredicted RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 IBSPP21815 317 aaPredicted RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 HMGB2P26583 209 aaKnown RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 DRC1Q96MC2 740 aa5.46□□□□□ -1.54
NCOA1-201ENST00000288599 HDAC5Q9UQL6 1122 aa5.46□□□□□ -1.54
NCOA1-201ENST00000288599 ZBTB24O43167 697 aaPredicted RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 MYCNP04198 464 aaPredicted RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 KANK4Q5T7N3 995 aaPredicted RBP5.46□□□□□ -1.54
NCOA1-201ENST00000288599 DNAI2Q9GZS0 605 aa5.46□□□□□ -1.54
NCOA1-201ENST00000288599 MLECQ14165 292 aa5.45□□□□□ -1.54
NCOA1-201ENST00000288599 CT47A1Q5JQC4 288 aaPredicted RBP5.45□□□□□ -1.54
NCOA1-201ENST00000288599 PTMSP20962 102 aa5.45□□□□□ -1.54
NCOA1-201ENST00000288599 GOLGA6L1Q8N7Z2 621 aa5.45□□□□□ -1.54
NCOA1-201ENST00000288599 MSNP26038 577 aaKnown RBP5.45□□□□□ -1.54
NCOA1-201ENST00000288599 TPM2P07951 284 aa5.45□□□□□ -1.54
NCOA1-201ENST00000288599 SART3Q15020 963 aaKnown RBP5.45□□□□□ -1.54
NCOA1-201ENST00000288599 CHMP4BQ9H444 224 aaKnown RBP5.45□□□□□ -1.54
NCOA1-201ENST00000288599 MRS2Q9HD23 443 aa5.45□□□□□ -1.54
NCOA1-201ENST00000288599 CHMP3Q9Y3E7 222 aa5.45□□□□□ -1.54
NCOA1-201ENST00000288599 HIRIP3Q9BW71 556 aaPredicted RBP5.44□□□□□ -1.54
NCOA1-201ENST00000288599 HMGN5P82970 282 aaKnown RBP5.44□□□□□ -1.54
NCOA1-201ENST00000288599 GOLGA6L3A6NEY3 463 aa5.44□□□□□ -1.54
NCOA1-201ENST00000288599 TSR1Q2NL82 804 aaKnown RBP5.44□□□□□ -1.54
NCOA1-201ENST00000288599 RBM33Q96EV2 1170 aaKnown RBP5.44□□□□□ -1.54
NCOA1-201ENST00000288599 TOMM22Q9NS69 142 aa5.44□□□□□ -1.54
NCOA1-201ENST00000288599 PDE4AP27815 886 aa5.44□□□□□ -1.54
NCOA1-201ENST00000288599 BIRC2Q13490 618 aa5.44□□□□□ -1.54
NCOA1-201ENST00000288599 CREBRFQ8IUR6 639 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 DHX16O60231 1041 aaKnown RBP5.43□□□□□ -1.54
NCOA1-201ENST00000288599 PLEKHD1A6NEE1 506 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 CPLX3Q8WVH0 158 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 CHMP4AQ9BY43 222 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 TIAM1Q13009 1591 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 ARHGEF11O15085 1522 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 MPHOSPH10O00566 681 aaKnown RBP5.43□□□□□ -1.54
NCOA1-201ENST00000288599 DEKP35659 375 aaKnown RBP5.43□□□□□ -1.54
NCOA1-201ENST00000288599 ZRSR2Q15696 482 aaKnown RBP5.43□□□□□ -1.54
NCOA1-201ENST00000288599 SNAPC4Q5SXM2 1469 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 TPM3P06753 285 aa5.43□□□□□ -1.54
NCOA1-201ENST00000288599 CALD1Q05682 793 aaKnown RBP5.42□□□□□ -1.54
NCOA1-201ENST00000288599 RWDD1Q9H446 243 aaPredicted RBP5.42□□□□□ -1.54
NCOA1-201ENST00000288599 MAPK8IP3Q9UPT6 1336 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 HSP90AB1P08238 724 aaKnown RBP5.42□□□□□ -1.54
NCOA1-201ENST00000288599 ZFYVE27Q5T4F4 411 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 RTF1Q92541 710 aaKnown RBP5.42□□□□□ -1.54
NCOA1-201ENST00000288599 GZF1Q9H116 711 aaPredicted RBP5.42□□□□□ -1.54
NCOA1-201ENST00000288599 CFAP43Q8NDM7 1665 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 GRM1Q13255 1194 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 ABCA10Q8WWZ4 1543 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 TTLL12Q14166 644 aaPredicted RBP5.42□□□□□ -1.54
NCOA1-201ENST00000288599 LRSAM1Q6UWE0 723 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 RGS3P49796 1198 aa5.42□□□□□ -1.54
NCOA1-201ENST00000288599 HTATSF1O43719 755 aaKnown RBP5.41□□□□□ -1.54
NCOA1-201ENST00000288599 TSPY4P0CV99 314 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 TSPY10P0CW01 314 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 FAM161AQ3B820 660 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 PABPN1LA6NDY0 278 aaKnown RBP5.41□□□□□ -1.54
NCOA1-201ENST00000288599 HSP90B1P14625 803 aaKnown RBP5.41□□□□□ -1.54
NCOA1-201ENST00000288599 NUDCQ9Y266 331 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 CADPSQ9ULU8 1353 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 P3H3Q8IVL6 736 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 DESP17661 470 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 HSP90AB4PQ58FF6 505 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 SAMD9Q5K651 1589 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 SOX12O15370 315 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 HMMRO75330 724 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 KCNH8Q96L42 1107 aa5.41□□□□□ -1.54
NCOA1-201ENST00000288599 FGD5Q6ZNL6 1462 aa5.4□□□□□ -1.54
NCOA1-201ENST00000288599 AKAP17AQ02040 695 aaKnown RBP5.4□□□□□ -1.54
NCOA1-201ENST00000288599 VPS37DQ86XT2 251 aa5.4□□□□□ -1.54
NCOA1-201ENST00000288599 SMC4Q9NTJ3 1288 aa5.4□□□□□ -1.54
NCOA1-201ENST00000288599 ABCA5Q8WWZ7 1642 aa5.4□□□□□ -1.54
NCOA1-201ENST00000288599 EIF4E1BA6NMX2 242 aaKnown RBP5.4□□□□□ -1.54
NCOA1-201ENST00000288599 MCCP23508 829 aa5.4□□□□□ -1.54
NCOA1-201ENST00000288599 CCDC47Q96A33 483 aaKnown RBP5.4□□□□□ -1.54
NCOA1-201ENST00000288599 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
NCOA1-201ENST00000288599 IKQ13123 557 aaPredicted RBP5.4□□□□□ -1.55
NCOA1-201ENST00000288599 SUPT16HQ9Y5B9 1047 aaKnown RBP5.4□□□□□ -1.55
NCOA1-201ENST00000288599 PES1O00541 588 aaKnown RBP5.39□□□□□ -1.55
NCOA1-201ENST00000288599 POLA1P09884 1462 aaPredicted RBP5.39□□□□□ -1.55
NCOA1-201ENST00000288599 PTPRKQ15262 1439 aa5.39□□□□□ -1.55
NCOA1-201ENST00000288599 HOMER1Q86YM7 354 aa5.39□□□□□ -1.55
NCOA1-201ENST00000288599 SETQ01105 290 aaPredicted RBP5.39□□□□□ -1.55
NCOA1-201ENST00000288599 TPD52L1Q16890 204 aaPredicted RBP5.39□□□□□ -1.55
NCOA1-201ENST00000288599 KDM2AQ9Y2K7 1162 aa5.39□□□□□ -1.55
NCOA1-201ENST00000288599 KIF27Q86VH2 1401 aa5.38□□□□□ -1.55
NCOA1-201ENST00000288599 MAGI3Q5TCQ9 1506 aa5.38□□□□□ -1.55
NCOA1-201ENST00000288599 NOP58Q9Y2X3 529 aaKnown RBP5.38□□□□□ -1.55
NCOA1-201ENST00000288599 RGS22Q8NE09 1264 aa5.38□□□□□ -1.55
NCOA1-201ENST00000288599 BCL11BQ9C0K0 894 aaPredicted RBP5.38□□□□□ -1.55
NCOA1-201ENST00000288599 EID1Q9Y6B2 187 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms