RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ABCC5O15440 1437 aa17.42■□□□□ 0.38
SCAF4-201ENST00000286835 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
SCAF4-201ENST00000286835 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
SCAF4-201ENST00000286835 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
SCAF4-201ENST00000286835 SLKQ9H2G2 1235 aaPredicted RBP17.4■□□□□ 0.38
SCAF4-201ENST00000286835 MS4A1P11836 297 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 GSE1Q14687 1217 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 KDM6BO15054 1643 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 USP35Q9P2H5 1018 aa17.39■□□□□ 0.37
SCAF4-201ENST00000286835 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
SCAF4-201ENST00000286835 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
SCAF4-201ENST00000286835 CUL7Q14999 1698 aa17.38■□□□□ 0.37
SCAF4-201ENST00000286835 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
SCAF4-201ENST00000286835 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
SCAF4-201ENST00000286835 UPF2Q9HAU5 1272 aaKnown RBP17.37■□□□□ 0.37
SCAF4-201ENST00000286835 KIF3BO15066 747 aa17.37■□□□□ 0.37
SCAF4-201ENST00000286835 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
SCAF4-201ENST00000286835 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
SCAF4-201ENST00000286835 MAGI3Q5TCQ9 1506 aa17.35■□□□□ 0.37
SCAF4-201ENST00000286835 HECW1Q76N89 1606 aa17.35■□□□□ 0.37
SCAF4-201ENST00000286835 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
SCAF4-201ENST00000286835 CTTNBP2Q8WZ74 1663 aa17.33■□□□□ 0.37
SCAF4-201ENST00000286835 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
SCAF4-201ENST00000286835 FAM161AQ3B820 660 aa17.32■□□□□ 0.36
SCAF4-201ENST00000286835 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
SCAF4-201ENST00000286835 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
SCAF4-201ENST00000286835 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
SCAF4-201ENST00000286835 BECN1Q14457 450 aa17.3■□□□□ 0.36
SCAF4-201ENST00000286835 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
SCAF4-201ENST00000286835 APAF1O14727 1248 aa17.29■□□□□ 0.36
SCAF4-201ENST00000286835 DENND4BO75064 1496 aaPredicted RBP17.29■□□□□ 0.36
SCAF4-201ENST00000286835 TEX14Q8IWB6 1497 aa17.29■□□□□ 0.36
SCAF4-201ENST00000286835 SPATA31E1Q6ZUB1 1445 aa17.28■□□□□ 0.36
SCAF4-201ENST00000286835 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
SCAF4-201ENST00000286835 CLUAP1Q96AJ1 413 aa17.27■□□□□ 0.36
SCAF4-201ENST00000286835 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
SCAF4-201ENST00000286835 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
SCAF4-201ENST00000286835 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
SCAF4-201ENST00000286835 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
SCAF4-201ENST00000286835 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
SCAF4-201ENST00000286835 KIAA0586Q9BVV6 1533 aa17.25■□□□□ 0.35
SCAF4-201ENST00000286835 RSPH4AQ5TD94 716 aa17.25■□□□□ 0.35
SCAF4-201ENST00000286835 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
SCAF4-201ENST00000286835 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
SCAF4-201ENST00000286835 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
SCAF4-201ENST00000286835 KANK1Q14678 1352 aa17.24■□□□□ 0.35
SCAF4-201ENST00000286835 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
SCAF4-201ENST00000286835 BCAR3O75815 825 aa17.23■□□□□ 0.35
SCAF4-201ENST00000286835 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
SCAF4-201ENST00000286835 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
SCAF4-201ENST00000286835 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
SCAF4-201ENST00000286835 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAF4-201ENST00000286835 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.34
SCAF4-201ENST00000286835 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
SCAF4-201ENST00000286835 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
SCAF4-201ENST00000286835 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
SCAF4-201ENST00000286835 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
SCAF4-201ENST00000286835 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-201ENST00000286835 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
SCAF4-201ENST00000286835 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
SCAF4-201ENST00000286835 SYNJ2O15056 1496 aa17.19■□□□□ 0.34
SCAF4-201ENST00000286835 PZPP20742 1482 aa17.19■□□□□ 0.34
SCAF4-201ENST00000286835 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
SCAF4-201ENST00000286835 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
SCAF4-201ENST00000286835 SAMD9Q5K651 1589 aa17.16■□□□□ 0.34
SCAF4-201ENST00000286835 FAM69CQ0P6D2 419 aa17.16■□□□□ 0.34
SCAF4-201ENST00000286835 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
SCAF4-201ENST00000286835 GCC2Q8IWJ2 1684 aa17.15■□□□□ 0.34
SCAF4-201ENST00000286835 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
SCAF4-201ENST00000286835 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.33
SCAF4-201ENST00000286835 DISP3Q9P2K9 1392 aa17.14■□□□□ 0.33
SCAF4-201ENST00000286835 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
SCAF4-201ENST00000286835 STK26Q9P289 416 aa17.13■□□□□ 0.33
SCAF4-201ENST00000286835 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
SCAF4-201ENST00000286835 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
SCAF4-201ENST00000286835 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
SCAF4-201ENST00000286835 POGKQ9P215 609 aa17.12■□□□□ 0.33
SCAF4-201ENST00000286835 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
SCAF4-201ENST00000286835 PER1O15534 1290 aaPredicted RBP17.11■□□□□ 0.33
SCAF4-201ENST00000286835 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
SCAF4-201ENST00000286835 ARHGEF11O15085 1522 aa17.1■□□□□ 0.33
SCAF4-201ENST00000286835 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
SCAF4-201ENST00000286835 RALGAPBQ86X10 1494 aa17.09■□□□□ 0.33
SCAF4-201ENST00000286835 E9PSI1 815 aa17.09■□□□□ 0.33
SCAF4-201ENST00000286835 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
SCAF4-201ENST00000286835 WDR62O43379 1518 aa17.09■□□□□ 0.33
SCAF4-201ENST00000286835 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.33
SCAF4-201ENST00000286835 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.33
SCAF4-201ENST00000286835 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.32
SCAF4-201ENST00000286835 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
SCAF4-201ENST00000286835 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
SCAF4-201ENST00000286835 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
SCAF4-201ENST00000286835 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.329e-23■■■■□ 19.4
SCAF4-201ENST00000286835 C14orf37Q86TY3 774 aa17.06■□□□□ 0.32
SCAF4-201ENST00000286835 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
SCAF4-201ENST00000286835 SLFN5Q08AF3 891 aa17.06■□□□□ 0.32
SCAF4-201ENST00000286835 DNMT1P26358 1616 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms