RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 SF3B2Q13435 895 aaKnown RBP18.53■□□□□ 0.56
TRAPPC8-201ENST00000283351 NOL10Q9BSC4 688 aaKnown RBP18.53■□□□□ 0.56
TRAPPC8-201ENST00000283351 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
TRAPPC8-201ENST00000283351 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC8-201ENST00000283351 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
TRAPPC8-201ENST00000283351 CFAP44Q96MT7 982 aa18.52■□□□□ 0.56
TRAPPC8-201ENST00000283351 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC8-201ENST00000283351 TCEAL9Q9UHQ7 104 aa18.52■□□□□ 0.55
TRAPPC8-201ENST00000283351 HMMRO75330 724 aa18.52■□□□□ 0.55
TRAPPC8-201ENST00000283351 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
TRAPPC8-201ENST00000283351 NOC3LQ8WTT2 800 aaKnown RBP18.5■□□□□ 0.55
TRAPPC8-201ENST00000283351 CLUAP1Q96AJ1 413 aa18.5■□□□□ 0.55
TRAPPC8-201ENST00000283351 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC8-201ENST00000283351 L1TD1Q5T7N2 865 aaKnown RBP18.49■□□□□ 0.55
TRAPPC8-201ENST00000283351 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
TRAPPC8-201ENST00000283351 VPS37DQ86XT2 251 aa18.49■□□□□ 0.55
TRAPPC8-201ENST00000283351 PPP4R2Q9NY27 417 aa18.49■□□□□ 0.55
TRAPPC8-201ENST00000283351 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
TRAPPC8-201ENST00000283351 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
TRAPPC8-201ENST00000283351 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
TRAPPC8-201ENST00000283351 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC8-201ENST00000283351 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC8-201ENST00000283351 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
TRAPPC8-201ENST00000283351 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC8-201ENST00000283351 CCDC34Q96HJ3 373 aa18.45■□□□□ 0.54
TRAPPC8-201ENST00000283351 PTPRGP23470 1445 aa18.45■□□□□ 0.54
TRAPPC8-201ENST00000283351 FMN1Q68DA7 1419 aa18.45■□□□□ 0.54
TRAPPC8-201ENST00000283351 NUTM2BA6NNL0 878 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC8-201ENST00000283351 NUTM2EB1AL46 878 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC8-201ENST00000283351 NUTM2AQ8IVF1 878 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC8-201ENST00000283351 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
TRAPPC8-201ENST00000283351 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
TRAPPC8-201ENST00000283351 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
TRAPPC8-201ENST00000283351 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
TRAPPC8-201ENST00000283351 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
TRAPPC8-201ENST00000283351 NEXNQ0ZGT2 675 aa18.43■□□□□ 0.54
TRAPPC8-201ENST00000283351 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
TRAPPC8-201ENST00000283351 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
TRAPPC8-201ENST00000283351 PIP4K2BP78356 416 aa18.42■□□□□ 0.54
TRAPPC8-201ENST00000283351 CEP89Q96ST8 783 aa18.42■□□□□ 0.54
TRAPPC8-201ENST00000283351 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
TRAPPC8-201ENST00000283351 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
TRAPPC8-201ENST00000283351 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
TRAPPC8-201ENST00000283351 RALBP1Q15311 655 aa18.38■□□□□ 0.53
TRAPPC8-201ENST00000283351 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC8-201ENST00000283351 EVC2Q86UK5 1308 aa18.36■□□□□ 0.53
TRAPPC8-201ENST00000283351 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
TRAPPC8-201ENST00000283351 FHOD3Q2V2M9 1422 aa18.36■□□□□ 0.53
TRAPPC8-201ENST00000283351 APPP05067 770 aa18.36■□□□□ 0.53
TRAPPC8-201ENST00000283351 NAP1L5Q96NT1 182 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC8-201ENST00000283351 PES1O00541 588 aaKnown RBP18.36■□□□□ 0.53
TRAPPC8-201ENST00000283351 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
TRAPPC8-201ENST00000283351 MFAP1P55081 439 aaKnown RBP18.35■□□□□ 0.53
TRAPPC8-201ENST00000283351 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
TRAPPC8-201ENST00000283351 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC8-201ENST00000283351 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
TRAPPC8-201ENST00000283351 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
TRAPPC8-201ENST00000283351 TPM4P67936 248 aa18.34■□□□□ 0.53
TRAPPC8-201ENST00000283351 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
TRAPPC8-201ENST00000283351 RILPL2Q969X0 211 aa18.34■□□□□ 0.53
TRAPPC8-201ENST00000283351 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.53
TRAPPC8-201ENST00000283351 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRAPPC8-201ENST00000283351 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
TRAPPC8-201ENST00000283351 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
TRAPPC8-201ENST00000283351 CCAR1Q8IX12 1150 aaKnown RBP18.31■□□□□ 0.52
TRAPPC8-201ENST00000283351 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
TRAPPC8-201ENST00000283351 A0A0U1RQG5 324 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC8-201ENST00000283351 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC8-201ENST00000283351 CCDC144AA2RUR9 1427 aa18.3■□□□□ 0.52
TRAPPC8-201ENST00000283351 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
TRAPPC8-201ENST00000283351 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
TRAPPC8-201ENST00000283351 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
TRAPPC8-201ENST00000283351 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
TRAPPC8-201ENST00000283351 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
TRAPPC8-201ENST00000283351 BCL2L13Q9BXK5 485 aa18.29■□□□□ 0.52
TRAPPC8-201ENST00000283351 CCDC43Q96MW1 224 aaKnown RBP18.28■□□□□ 0.52
TRAPPC8-201ENST00000283351 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
TRAPPC8-201ENST00000283351 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
TRAPPC8-201ENST00000283351 FYB1O15117 783 aa18.28■□□□□ 0.52
TRAPPC8-201ENST00000283351 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.52
TRAPPC8-201ENST00000283351 UACAQ9BZF9 1416 aa18.27■□□□□ 0.51
TRAPPC8-201ENST00000283351 MSNP26038 577 aaKnown RBP18.27■□□□□ 0.51
TRAPPC8-201ENST00000283351 SLKQ9H2G2 1235 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC8-201ENST00000283351 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 TCERG1O14776 1098 aaKnown RBP18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 PANK3Q9H999 370 aa18.26■□□□□ 0.51
TRAPPC8-201ENST00000283351 H3BQV1 296 aa18.25■□□□□ 0.51
TRAPPC8-201ENST00000283351 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
TRAPPC8-201ENST00000283351 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
TRAPPC8-201ENST00000283351 TPD52L1Q16890 204 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC8-201ENST00000283351 WASHC2AQ641Q2 1341 aa18.25■□□□□ 0.51
TRAPPC8-201ENST00000283351 PLIN1O60240 522 aa18.25■□□□□ 0.51
TRAPPC8-201ENST00000283351 NLRP6P59044 892 aa18.24■□□□□ 0.51
TRAPPC8-201ENST00000283351 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
TRAPPC8-201ENST00000283351 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
TRAPPC8-201ENST00000283351 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms