RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
SPARCL1-201ENST00000282470 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
SPARCL1-201ENST00000282470 ZFYVE16Q7Z3T8 1539 aa10.05□□□□□ -0.8
SPARCL1-201ENST00000282470 RTEL1-TNFRSF6BF6WH68 1400 aa10.05□□□□□ -0.8
SPARCL1-201ENST00000282470 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
SPARCL1-201ENST00000282470 DEPDC5O75140 1603 aa10.05□□□□□ -0.8
SPARCL1-201ENST00000282470 CCDC144AA2RUR9 1427 aa10.05□□□□□ -0.8
SPARCL1-201ENST00000282470 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
SPARCL1-201ENST00000282470 DHX29Q7Z478 1369 aaKnown RBP10.04□□□□□ -0.8
SPARCL1-201ENST00000282470 E9PCH4 1651 aa10.04□□□□□ -0.8
SPARCL1-201ENST00000282470 INO80Q9ULG1 1556 aaPredicted RBP10.04□□□□□ -0.8
SPARCL1-201ENST00000282470 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
SPARCL1-201ENST00000282470 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
SPARCL1-201ENST00000282470 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
SPARCL1-201ENST00000282470 EIF2AK4Q9P2K8 1649 aaKnown RBP10.03□□□□□ -0.8
SPARCL1-201ENST00000282470 A2MP01023 1474 aa10.02□□□□□ -0.8
SPARCL1-201ENST00000282470 GPRASP1Q5JY77 1395 aa10.02□□□□□ -0.81
SPARCL1-201ENST00000282470 RNF17Q9BXT8 1623 aaKnown RBP10.01□□□□□ -0.81
SPARCL1-201ENST00000282470 PRDM15P57071 1507 aaPredicted RBP10.01□□□□□ -0.81
SPARCL1-201ENST00000282470 VWDEQ8N2E2 1590 aa10□□□□□ -0.81
SPARCL1-201ENST00000282470 ZNF326Q5BKZ1 582 aaKnown RBP10□□□□□ -0.81
SPARCL1-201ENST00000282470 DCAF11Q8TEB1 546 aa10□□□□□ -0.81
SPARCL1-201ENST00000282470 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
SPARCL1-201ENST00000282470 TET3O43151 1660 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 TRPM2O94759 1503 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 ATP7AQ04656 1500 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 CEP152O94986 1710 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 FANCAO15360 1455 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 SPHKAPQ2M3C7 1700 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 HNRNPUQ00839 825 aaKnown RBP eCLIP9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 CCDC184Q52MB2 194 aa9.99□□□□□ -0.81
SPARCL1-201ENST00000282470 NEURL4Q96JN8 1562 aa9.98□□□□□ -0.81
SPARCL1-201ENST00000282470 SPAG9O60271 1321 aaKnown RBP9.97□□□□□ -0.81
SPARCL1-201ENST00000282470 PTPRTO14522 1441 aa9.97□□□□□ -0.81
SPARCL1-201ENST00000282470 FKBP8Q14318 412 aa9.96□□□□□ -0.81
SPARCL1-201ENST00000282470 KTN1Q86UP2 1357 aaKnown RBP9.96□□□□□ -0.81
SPARCL1-201ENST00000282470 MRS2Q9HD23 443 aa9.96□□□□□ -0.81
SPARCL1-201ENST00000282470 MROH1Q8NDA8 1641 aa9.96□□□□□ -0.82
SPARCL1-201ENST00000282470 MADDQ8WXG6 1647 aa9.96□□□□□ -0.82
SPARCL1-201ENST00000282470 ASXL2Q76L83 1435 aa9.96□□□□□ -0.82
SPARCL1-201ENST00000282470 NEFLP07196 543 aa9.96□□□□□ -0.82
SPARCL1-201ENST00000282470 KDM2AQ9Y2K7 1162 aa9.96□□□□□ -0.82
SPARCL1-201ENST00000282470 ZBED9Q6R2W3 1325 aa9.95□□□□□ -0.82
SPARCL1-201ENST00000282470 ST20-MTHFSA0A0A6YYL1 179 aa9.95□□□□□ -0.82
SPARCL1-201ENST00000282470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.95□□□□□ -0.82
SPARCL1-201ENST00000282470 ADGRL1O94910 1474 aa9.95□□□□□ -0.82
SPARCL1-201ENST00000282470 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
SPARCL1-201ENST00000282470 CFAP74Q9C0B2 1584 aa9.95□□□□□ -0.82
SPARCL1-201ENST00000282470 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
SPARCL1-201ENST00000282470 IQGAP1P46940 1657 aa9.94□□□□□ -0.82
SPARCL1-201ENST00000282470 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
SPARCL1-201ENST00000282470 AFAP1Q8N556 730 aa9.93□□□□□ -0.82
SPARCL1-201ENST00000282470 KIAA1210Q9ULL0 1709 aa9.93□□□□□ -0.82
SPARCL1-201ENST00000282470 SCAPERQ9BY12 1400 aa9.92□□□□□ -0.82
SPARCL1-201ENST00000282470 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
SPARCL1-201ENST00000282470 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
SPARCL1-201ENST00000282470 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
SPARCL1-201ENST00000282470 EFCAB6Q5THR3 1501 aa9.91□□□□□ -0.82
SPARCL1-201ENST00000282470 FAM9BQ8IZU0 186 aa9.9□□□□□ -0.82
SPARCL1-201ENST00000282470 KANK1Q14678 1352 aa9.9□□□□□ -0.82
SPARCL1-201ENST00000282470 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
SPARCL1-201ENST00000282470 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
SPARCL1-201ENST00000282470 ERICH6BQ5W0A0 696 aa9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 TESK2Q96S53 571 aa9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 BRD4O60885 1362 aaPredicted RBP9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 IFT172Q9UG01 1749 aa9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 RALBP1Q15311 655 aa9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 LRPPRCP42704 1394 aaKnown RBP9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 PARD3Q8TEW0 1356 aa9.89□□□□□ -0.83
SPARCL1-201ENST00000282470 PPRC1Q5VV67 1664 aaKnown RBP9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 WASHC2CQ9Y4E1 1318 aa9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 MYOM2P54296 1465 aa9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
SPARCL1-201ENST00000282470 PNISRQ8TF01 805 aaKnown RBP9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 BCANQ96GW7 911 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 POLR3GLQ9BT43 218 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 KIF1BO60333 1816 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 MLH3Q9UHC1 1453 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 POGZQ7Z3K3 1410 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 HECW2Q9P2P5 1572 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 OSCARQ8IYS5 282 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
SPARCL1-201ENST00000282470 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
SPARCL1-201ENST00000282470 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
SPARCL1-201ENST00000282470 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
SPARCL1-201ENST00000282470 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
SPARCL1-201ENST00000282470 SYNMO15061 1565 aa9.85□□□□□ -0.83
SPARCL1-201ENST00000282470 NRXN1Q9ULB1 1477 aa9.85□□□□□ -0.83
SPARCL1-201ENST00000282470 MROH2AA6NES4 1674 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 CD109Q6YHK3 1445 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 ABCA6Q8N139 1617 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 INSRP06213 1382 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 ADGRB3O60242 1522 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 KIF3BO15066 747 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 TMC1Q8TDI8 760 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 MYOM1P52179 1685 aa9.84□□□□□ -0.83
SPARCL1-201ENST00000282470 NEO1Q92859 1461 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms