RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 ARHGEF40Q8TER5 1519 aa28.27■■■□□ 2.12
CDC42EP2-201ENST00000279249 DEPDC5O75140 1603 aa28.26■■■□□ 2.11
CDC42EP2-201ENST00000279249 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
CDC42EP2-201ENST00000279249 BCORL1Q5H9F3 1711 aa28.25■■■□□ 2.11
CDC42EP2-201ENST00000279249 KDM5DQ9BY66 1539 aa28.25■■■□□ 2.11
CDC42EP2-201ENST00000279249 TRIM52Q96A61 297 aa28.25■■■□□ 2.11
CDC42EP2-201ENST00000279249 PZPP20742 1482 aa28.23■■■□□ 2.11
CDC42EP2-201ENST00000279249 REREQ9P2R6 1566 aa28.22■■■□□ 2.11
CDC42EP2-201ENST00000279249 SIGLEC1Q9BZZ2 1709 aa28.22■■■□□ 2.11
CDC42EP2-201ENST00000279249 MROH1Q8NDA8 1641 aa28.21■■■□□ 2.11
CDC42EP2-201ENST00000279249 ATP10AO60312 1499 aa28.21■■■□□ 2.11
CDC42EP2-201ENST00000279249 RNF17Q9BXT8 1623 aaKnown RBP28.2■■■□□ 2.11
CDC42EP2-201ENST00000279249 IQGAP3Q86VI3 1631 aa28.18■■■□□ 2.1
CDC42EP2-201ENST00000279249 NUP155O75694 1391 aa28.16■■■□□ 2.1
CDC42EP2-201ENST00000279249 PRDM15P57071 1507 aaPredicted RBP28.16■■■□□ 2.1
CDC42EP2-201ENST00000279249 KIF3BO15066 747 aa28.15■■■□□ 2.1
CDC42EP2-201ENST00000279249 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
CDC42EP2-201ENST00000279249 FAM135AQ9P2D6 1515 aa28.15■■■□□ 2.1
CDC42EP2-201ENST00000279249 MPHOSPH9Q99550 1183 aa28.14■■■□□ 2.09
CDC42EP2-201ENST00000279249 VWDEQ8N2E2 1590 aa28.13■■■□□ 2.09
CDC42EP2-201ENST00000279249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.09
CDC42EP2-201ENST00000279249 AGLP35573 1532 aa28.11■■■□□ 2.09
CDC42EP2-201ENST00000279249 GTF3C3Q9Y5Q9 886 aa28.09■■■□□ 2.09
CDC42EP2-201ENST00000279249 SLC4A1APQ9BWU0 796 aaKnown RBP28.08■■■□□ 2.09
CDC42EP2-201ENST00000279249 CEP152O94986 1710 aa28.07■■■□□ 2.08
CDC42EP2-201ENST00000279249 CLSPNQ9HAW4 1339 aa28.06■■■□□ 2.08
CDC42EP2-201ENST00000279249 TET3O43151 1660 aa28.03■■■□□ 2.08
CDC42EP2-201ENST00000279249 FOXD1Q16676 465 aa28.02■■■□□ 2.08
CDC42EP2-201ENST00000279249 KANK1Q14678 1352 aa28■■■□□ 2.07
CDC42EP2-201ENST00000279249 PKD2Q13563 968 aa28■■■□□ 2.07
CDC42EP2-201ENST00000279249 GGT6Q6P531 493 aa28■■■□□ 2.07
CDC42EP2-201ENST00000279249 E9PCH4 1651 aa28■■■□□ 2.07
CDC42EP2-201ENST00000279249 LMTK2Q8IWU2 1503 aa27.99■■■□□ 2.07
CDC42EP2-201ENST00000279249 ZC3H13Q5T200 1668 aaKnown RBP27.98■■■□□ 2.07
CDC42EP2-201ENST00000279249 ABCC3O15438 1527 aa27.97■■■□□ 2.07
CDC42EP2-201ENST00000279249 EFCAB6Q5THR3 1501 aa27.95■■■□□ 2.06
CDC42EP2-201ENST00000279249 ANKRD30BQ9BXX2 1392 aa27.94■■■□□ 2.06
CDC42EP2-201ENST00000279249 CAMSAP1Q5T5Y3 1602 aa27.94■■■□□ 2.06
CDC42EP2-201ENST00000279249 SIN3AQ96ST3 1273 aa27.91■■■□□ 2.06
CDC42EP2-201ENST00000279249 CLTCQ00610 1675 aaKnown RBP27.88■■■□□ 2.05
CDC42EP2-201ENST00000279249 SPHKAPQ2M3C7 1700 aa27.88■■■□□ 2.05
CDC42EP2-201ENST00000279249 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
CDC42EP2-201ENST00000279249 PLA2R1Q13018 1463 aa27.86■■■□□ 2.05
CDC42EP2-201ENST00000279249 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
CDC42EP2-201ENST00000279249 MLECQ14165 292 aa27.85■■■□□ 2.05
CDC42EP2-201ENST00000279249 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
CDC42EP2-201ENST00000279249 NPATQ14207 1427 aa27.82■■■□□ 2.04
CDC42EP2-201ENST00000279249 ZNF316A6NFI3 1004 aaPredicted RBP27.81■■■□□ 2.04
CDC42EP2-201ENST00000279249 PPP6R1Q9UPN7 881 aa27.81■■■□□ 2.04
CDC42EP2-201ENST00000279249 RPRD2Q5VT52 1461 aaKnown RBP27.81■■■□□ 2.04
CDC42EP2-201ENST00000279249 PTPRTO14522 1441 aa27.8■■■□□ 2.04
CDC42EP2-201ENST00000279249 TRPM2O94759 1503 aa27.79■■■□□ 2.04
CDC42EP2-201ENST00000279249 ARHGAP31Q2M1Z3 1444 aa27.78■■■□□ 2.04
CDC42EP2-201ENST00000279249 FER1L4A9Z1Z3 1794 aa27.76■■■□□ 2.03
CDC42EP2-201ENST00000279249 PREX1Q8TCU6 1659 aa27.75■■■□□ 2.03
CDC42EP2-201ENST00000279249 CLTCL1P53675 1640 aa27.74■■■□□ 2.03
CDC42EP2-201ENST00000279249 MROH2AA6NES4 1674 aa27.74■■■□□ 2.03
CDC42EP2-201ENST00000279249 CCDC144AA2RUR9 1427 aa27.71■■■□□ 2.03
CDC42EP2-201ENST00000279249 NOS1P29475 1434 aa27.7■■■□□ 2.02
CDC42EP2-201ENST00000279249 SYNMO15061 1565 aa27.7■■■□□ 2.02
CDC42EP2-201ENST00000279249 UGGT1Q9NYU2 1555 aa27.69■■■□□ 2.02
CDC42EP2-201ENST00000279249 ADAMTSL3P82987 1691 aa27.67■■■□□ 2.02
CDC42EP2-201ENST00000279249 CNTLNQ9NXG0 1405 aa27.67■■■□□ 2.02
CDC42EP2-201ENST00000279249 MADDQ8WXG6 1647 aa27.66■■■□□ 2.02
CDC42EP2-201ENST00000279249 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
CDC42EP2-201ENST00000279249 PIK3C2BO00750 1634 aa27.65■■■□□ 2.02
CDC42EP2-201ENST00000279249 ERVK-7P63135 1459 aa27.65■■■□□ 2.02
CDC42EP2-201ENST00000279249 ZMYM3Q14202 1370 aa27.64■■■□□ 2.02
CDC42EP2-201ENST00000279249 C3P01024 1663 aa27.63■■■□□ 2.01
CDC42EP2-201ENST00000279249 ESF1Q9H501 851 aaKnown RBP27.63■■■□□ 2.01
CDC42EP2-201ENST00000279249 SPATA31D1Q6ZQQ2 1576 aa27.63■■■□□ 2.01
CDC42EP2-201ENST00000279249 TIMELESSQ9UNS1 1208 aa27.63■■■□□ 2.01
CDC42EP2-201ENST00000279249 KIF1BO60333 1816 aa27.62■■■□□ 2.01
CDC42EP2-201ENST00000279249 RIMS1Q86UR5 1692 aaKnown RBP27.62■■■□□ 2.01
CDC42EP2-201ENST00000279249 FBXO31Q5XUX0 539 aaPredicted RBP27.61■■■□□ 2.01
CDC42EP2-201ENST00000279249 SPATA31E1Q6ZUB1 1445 aa27.58■■■□□ 2.01
CDC42EP2-201ENST00000279249 L3MBTL2Q969R5 705 aa27.57■■■□□ 2
CDC42EP2-201ENST00000279249 NEURL4Q96JN8 1562 aa27.55■■■□□ 2
CDC42EP2-201ENST00000279249 ADGRB3O60242 1522 aa27.53■■■□□ 2
CDC42EP2-201ENST00000279249 MYO5BQ9ULV0 1848 aa27.52■■■□□ 2
CDC42EP2-201ENST00000279249 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
CDC42EP2-201ENST00000279249 CEBPAP49715 358 aaPredicted RBP27.49■■□□□ 1.99
CDC42EP2-201ENST00000279249 IFT172Q9UG01 1749 aa27.48■■□□□ 1.99
CDC42EP2-201ENST00000279249 IDI1Q13907 227 aa27.47■■□□□ 1.99
CDC42EP2-201ENST00000279249 RGL3Q3MIN7 710 aa27.47■■□□□ 1.99
CDC42EP2-201ENST00000279249 TMEM131LA2VDJ0 1609 aa27.47■■□□□ 1.99
CDC42EP2-201ENST00000279249 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
CDC42EP2-201ENST00000279249 TNRQ92752 1358 aa27.45■■□□□ 1.98
CDC42EP2-201ENST00000279249 PPLO60437 1756 aa27.42■■□□□ 1.98
CDC42EP2-201ENST00000279249 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
CDC42EP2-201ENST00000279249 CHGAP10645 457 aaKnown RBP27.39■■□□□ 1.98
CDC42EP2-201ENST00000279249 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.98
CDC42EP2-201ENST00000279249 UHRF1BP1Q6BDS2 1440 aa27.38■■□□□ 1.97
CDC42EP2-201ENST00000279249 NBPF8Q3BBV2 869 aa27.38■■□□□ 1.97
CDC42EP2-201ENST00000279249 MIER1Q8N108 512 aa27.37■■□□□ 1.97
CDC42EP2-201ENST00000279249 MYO3AQ8NEV4 1616 aa27.37■■□□□ 1.97
CDC42EP2-201ENST00000279249 KDM5AP29375 1690 aaKnown RBP27.37■■□□□ 1.97
CDC42EP2-201ENST00000279249 UBR1Q8IWV7 1749 aa27.36■■□□□ 1.97
CDC42EP2-201ENST00000279249 KDM2AQ9Y2K7 1162 aa27.36■■□□□ 1.97
CDC42EP2-201ENST00000279249 PTPRMP28827 1452 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms