RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 UNC13BO14795 1591 aa16.92■□□□□ 0.3
SSRP1-201ENST00000278412 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
SSRP1-201ENST00000278412 CFAP74Q9C0B2 1584 aa16.92■□□□□ 0.3
SSRP1-201ENST00000278412 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
SSRP1-201ENST00000278412 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-201ENST00000278412 DHX29Q7Z478 1369 aaKnown RBP16.9■□□□□ 0.3
SSRP1-201ENST00000278412 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.3
SSRP1-201ENST00000278412 GGT6Q6P531 493 aa16.89■□□□□ 0.29
SSRP1-201ENST00000278412 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
SSRP1-201ENST00000278412 RPRD2Q5VT52 1461 aaKnown RBP16.88■□□□□ 0.29
SSRP1-201ENST00000278412 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-201ENST00000278412 A2MP01023 1474 aa16.87■□□□□ 0.29
SSRP1-201ENST00000278412 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
SSRP1-201ENST00000278412 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
SSRP1-201ENST00000278412 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
SSRP1-201ENST00000278412 MAGI2Q86UL8 1455 aa16.87■□□□□ 0.29
SSRP1-201ENST00000278412 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
SSRP1-201ENST00000278412 IQGAP3Q86VI3 1631 aa16.86■□□□□ 0.29
SSRP1-201ENST00000278412 ZNF326Q5BKZ1 582 aaKnown RBP16.86■□□□□ 0.29
SSRP1-201ENST00000278412 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
SSRP1-201ENST00000278412 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
SSRP1-201ENST00000278412 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
SSRP1-201ENST00000278412 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
SSRP1-201ENST00000278412 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
SSRP1-201ENST00000278412 E9PCH4 1651 aa16.82■□□□□ 0.28
SSRP1-201ENST00000278412 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
SSRP1-201ENST00000278412 SIGLEC1Q9BZZ2 1709 aa16.82■□□□□ 0.28
SSRP1-201ENST00000278412 CEP152O94986 1710 aa16.79■□□□□ 0.28
SSRP1-201ENST00000278412 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
SSRP1-201ENST00000278412 TIMELESSQ9UNS1 1208 aa16.78■□□□□ 0.28
SSRP1-201ENST00000278412 MYT1Q01538 1121 aa16.78■□□□□ 0.28
SSRP1-201ENST00000278412 MLECQ14165 292 aa16.78■□□□□ 0.28
SSRP1-201ENST00000278412 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
SSRP1-201ENST00000278412 PRDM15P57071 1507 aaPredicted RBP16.77■□□□□ 0.28
SSRP1-201ENST00000278412 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.27
SSRP1-201ENST00000278412 ATP10AO60312 1499 aa16.76■□□□□ 0.27
SSRP1-201ENST00000278412 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
SSRP1-201ENST00000278412 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
SSRP1-201ENST00000278412 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
SSRP1-201ENST00000278412 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
SSRP1-201ENST00000278412 WASHC2CQ9Y4E1 1318 aa16.73■□□□□ 0.27
SSRP1-201ENST00000278412 KANK1Q14678 1352 aa16.73■□□□□ 0.27
SSRP1-201ENST00000278412 ZMYM4Q5VZL5 1548 aa16.73■□□□□ 0.27
SSRP1-201ENST00000278412 RNF17Q9BXT8 1623 aaKnown RBP16.72■□□□□ 0.27
SSRP1-201ENST00000278412 TET3O43151 1660 aa16.72■□□□□ 0.27
SSRP1-201ENST00000278412 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
SSRP1-201ENST00000278412 NPATQ14207 1427 aa16.7■□□□□ 0.26
SSRP1-201ENST00000278412 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
SSRP1-201ENST00000278412 ABCC3O15438 1527 aa16.69■□□□□ 0.26
SSRP1-201ENST00000278412 EFCAB6Q5THR3 1501 aa16.69■□□□□ 0.26
SSRP1-201ENST00000278412 SPHKAPQ2M3C7 1700 aa16.69■□□□□ 0.26
SSRP1-201ENST00000278412 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
SSRP1-201ENST00000278412 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
SSRP1-201ENST00000278412 PTPRTO14522 1441 aa16.66■□□□□ 0.26
SSRP1-201ENST00000278412 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
SSRP1-201ENST00000278412 TRPM2O94759 1503 aa16.65■□□□□ 0.26
SSRP1-201ENST00000278412 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
SSRP1-201ENST00000278412 SPATA31E1Q6ZUB1 1445 aa16.64■□□□□ 0.25
SSRP1-201ENST00000278412 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
SSRP1-201ENST00000278412 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
SSRP1-201ENST00000278412 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
SSRP1-201ENST00000278412 BCORL1Q5H9F3 1711 aa16.63■□□□□ 0.25
SSRP1-201ENST00000278412 MIER1Q8N108 512 aa16.63■□□□□ 0.25
SSRP1-201ENST00000278412 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
SSRP1-201ENST00000278412 ARHGEF40Q8TER5 1519 aa16.63■□□□□ 0.25
SSRP1-201ENST00000278412 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-201ENST00000278412 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
SSRP1-201ENST00000278412 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
SSRP1-201ENST00000278412 MROH2AA6NES4 1674 aa16.6■□□□□ 0.25
SSRP1-201ENST00000278412 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.24
SSRP1-201ENST00000278412 SYNMO15061 1565 aa16.58■□□□□ 0.24
SSRP1-201ENST00000278412 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSRP1-201ENST00000278412 CLTCQ00610 1675 aaKnown RBP16.57■□□□□ 0.24
SSRP1-201ENST00000278412 UHRF1BP1Q6BDS2 1440 aa16.56■□□□□ 0.24
SSRP1-201ENST00000278412 IDI1Q13907 227 aa16.56■□□□□ 0.24
SSRP1-201ENST00000278412 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
SSRP1-201ENST00000278412 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
SSRP1-201ENST00000278412 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
SSRP1-201ENST00000278412 USP47Q96K76 1375 aa16.54■□□□□ 0.24
SSRP1-201ENST00000278412 CEBPAP49715 358 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-201ENST00000278412 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
SSRP1-201ENST00000278412 NOS1P29475 1434 aa16.53■□□□□ 0.24
SSRP1-201ENST00000278412 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
SSRP1-201ENST00000278412 AGLP35573 1532 aa16.53■□□□□ 0.24
SSRP1-201ENST00000278412 REREQ9P2R6 1566 aa16.52■□□□□ 0.24
SSRP1-201ENST00000278412 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.23
SSRP1-201ENST00000278412 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
SSRP1-201ENST00000278412 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
SSRP1-201ENST00000278412 KIF1BO60333 1816 aa16.51■□□□□ 0.23
SSRP1-201ENST00000278412 MYO5BQ9ULV0 1848 aa16.5■□□□□ 0.23
SSRP1-201ENST00000278412 PREX1Q8TCU6 1659 aa16.5■□□□□ 0.23
SSRP1-201ENST00000278412 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
SSRP1-201ENST00000278412 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
SSRP1-201ENST00000278412 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
SSRP1-201ENST00000278412 ZC3H13Q5T200 1668 aaKnown RBP16.48■□□□□ 0.23
SSRP1-201ENST00000278412 ADGRB3O60242 1522 aa16.48■□□□□ 0.23
SSRP1-201ENST00000278412 ARHGAP31Q2M1Z3 1444 aa16.48■□□□□ 0.23
SSRP1-201ENST00000278412 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
SSRP1-201ENST00000278412 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
SSRP1-201ENST00000278412 KIF7Q2M1P5 1343 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms