RNA–Protein interactions for RNA: ENST00000273398.7

ATP6V1A-201, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1A, Length 4,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-201ENST00000273398 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
ATP6V1A-201ENST00000273398 HIC1Q14526 733 aa9.41□□□□□ -0.9
ATP6V1A-201ENST00000273398 SOX12O15370 315 aa9.4□□□□□ -0.9
ATP6V1A-201ENST00000273398 MS4A1P11836 297 aa9.4□□□□□ -0.9
ATP6V1A-201ENST00000273398 MAP3K13O43283 966 aa9.4□□□□□ -0.9
ATP6V1A-201ENST00000273398 GLMNQ92990 594 aa9.4□□□□□ -0.9
ATP6V1A-201ENST00000273398 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.9
ATP6V1A-201ENST00000273398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.97e-6■■□□□ 12.8
ATP6V1A-201ENST00000273398 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.91
ATP6V1A-201ENST00000273398 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
ATP6V1A-201ENST00000273398 CLCN1P35523 988 aa9.39□□□□□ -0.91
ATP6V1A-201ENST00000273398 TBC1D12O60347 775 aa9.38□□□□□ -0.91
ATP6V1A-201ENST00000273398 PDE4CQ08493 712 aa9.38□□□□□ -0.91
ATP6V1A-201ENST00000273398 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
ATP6V1A-201ENST00000273398 RBM42Q9BTD8 480 aaKnown RBP9.37□□□□□ -0.91
ATP6V1A-201ENST00000273398 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
ATP6V1A-201ENST00000273398 COG6Q9Y2V7 657 aa9.36□□□□□ -0.91
ATP6V1A-201ENST00000273398 ZNF526Q8TF50 670 aaPredicted RBP9.36□□□□□ -0.91
ATP6V1A-201ENST00000273398 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
ATP6V1A-201ENST00000273398 CLK2P49760 499 aaKnown RBP9.35□□□□□ -0.91
ATP6V1A-201ENST00000273398 CACNB1Q02641 598 aaPredicted RBP9.35□□□□□ -0.91
ATP6V1A-201ENST00000273398 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
ATP6V1A-201ENST00000273398 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
ATP6V1A-201ENST00000273398 HDGFL1Q5TGJ6 251 aa9.35□□□□□ -0.91
ATP6V1A-201ENST00000273398 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
ATP6V1A-201ENST00000273398 DSG2Q14126 1118 aa9.34□□□□□ -0.91
ATP6V1A-201ENST00000273398 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
ATP6V1A-201ENST00000273398 EMILIN3Q9NT22 766 aa9.32□□□□□ -0.92
ATP6V1A-201ENST00000273398 PLPP6Q8IY26 295 aa9.32□□□□□ -0.92
ATP6V1A-201ENST00000273398 GPCPD1Q9NPB8 672 aa9.32□□□□□ -0.92
ATP6V1A-201ENST00000273398 CCER1Q8TC90 406 aaPredicted RBP9.31□□□□□ -0.92
ATP6V1A-201ENST00000273398 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
ATP6V1A-201ENST00000273398 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
ATP6V1A-201ENST00000273398 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
ATP6V1A-201ENST00000273398 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
ATP6V1A-201ENST00000273398 FBXO22Q8NEZ5 403 aa9.3□□□□□ -0.92
ATP6V1A-201ENST00000273398 RSPH4AQ5TD94 716 aa9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 ZNF579Q8NAF0 562 aaKnown RBP9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 CECR2Q9BXF3 1484 aa9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 ABL1P00519 1130 aa9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 MYO15BQ96JP2 1530 aa9.29□□□□□ -0.92
ATP6V1A-201ENST00000273398 RSF1Q96T23 1441 aaPredicted RBP9.28□□□□□ -0.92
ATP6V1A-201ENST00000273398 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
ATP6V1A-201ENST00000273398 VAC14Q08AM6 782 aa9.28□□□□□ -0.92
ATP6V1A-201ENST00000273398 SKIV2LQ15477 1246 aaKnown RBP9.28□□□□□ -0.92
ATP6V1A-201ENST00000273398 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
ATP6V1A-201ENST00000273398 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.92
ATP6V1A-201ENST00000273398 PRKAR2AP13861 404 aaKnown RBP9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 FARP1Q9Y4F1 1045 aaPredicted RBP9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 RFC5P40937 340 aa9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
ATP6V1A-201ENST00000273398 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
ATP6V1A-201ENST00000273398 PDIA6Q15084 440 aa9.26□□□□□ -0.93
ATP6V1A-201ENST00000273398 GIPC2Q8TF65 315 aa9.26□□□□□ -0.93
ATP6V1A-201ENST00000273398 MNX1P50219 401 aaPredicted RBP9.26□□□□□ -0.93
ATP6V1A-201ENST00000273398 AMHR2Q16671 573 aa9.26□□□□□ -0.93
ATP6V1A-201ENST00000273398 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
ATP6V1A-201ENST00000273398 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
ATP6V1A-201ENST00000273398 RDH13Q8NBN7 331 aa9.24□□□□□ -0.93
ATP6V1A-201ENST00000273398 VRTNQ9H8Y1 702 aa9.24□□□□□ -0.93
ATP6V1A-201ENST00000273398 NACADO15069 1562 aa9.24□□□□□ -0.93
ATP6V1A-201ENST00000273398 RNF40O75150 1001 aa9.24□□□□□ -0.93
ATP6V1A-201ENST00000273398 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
ATP6V1A-201ENST00000273398 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
ATP6V1A-201ENST00000273398 RB1CC1Q8TDY2 1594 aa9.23□□□□□ -0.93
ATP6V1A-201ENST00000273398 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
ATP6V1A-201ENST00000273398 DHX37Q8IY37 1157 aaKnown RBP9.22□□□□□ -0.93
ATP6V1A-201ENST00000273398 AAMPQ13685 434 aa9.21□□□□□ -0.93
ATP6V1A-201ENST00000273398 BRD1O95696 1058 aa9.21□□□□□ -0.94
ATP6V1A-201ENST00000273398 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
ATP6V1A-201ENST00000273398 PHF12Q96QT6 1004 aa9.21□□□□□ -0.94
ATP6V1A-201ENST00000273398 MRRFQ96E11 262 aaKnown RBP9.21□□□□□ -0.94
ATP6V1A-201ENST00000273398 MYSM1Q5VVJ2 828 aa9.2□□□□□ -0.94
ATP6V1A-201ENST00000273398 CDHR5Q9HBB8 845 aa9.2□□□□□ -0.94
ATP6V1A-201ENST00000273398 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
ATP6V1A-201ENST00000273398 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
ATP6V1A-201ENST00000273398 MS4A4AQ96JQ5 239 aa9.19□□□□□ -0.94
ATP6V1A-201ENST00000273398 TSNAXIP1Q2TAA8 658 aa9.19□□□□□ -0.94
ATP6V1A-201ENST00000273398 FOSBP53539 338 aa9.19□□□□□ -0.94
ATP6V1A-201ENST00000273398 MFSD10Q14728 455 aa9.19□□□□□ -0.94
ATP6V1A-201ENST00000273398 LGR5O75473 907 aa9.18□□□□□ -0.94
ATP6V1A-201ENST00000273398 C2orf72A6NCS6 295 aa9.18□□□□□ -0.94
ATP6V1A-201ENST00000273398 DPY19L2Q6NUT2 758 aa9.18□□□□□ -0.94
ATP6V1A-201ENST00000273398 ANO2Q9NQ90 1003 aa9.18□□□□□ -0.94
ATP6V1A-201ENST00000273398 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
ATP6V1A-201ENST00000273398 PUS7Q96PZ0 661 aaKnown RBP9.17□□□□□ -0.94
ATP6V1A-201ENST00000273398 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
ATP6V1A-201ENST00000273398 PSME1Q06323 249 aa9.17□□□□□ -0.94
ATP6V1A-201ENST00000273398 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
ATP6V1A-201ENST00000273398 CWC22Q9HCG8 908 aaKnown RBP9.17□□□□□ -0.94
ATP6V1A-201ENST00000273398 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.945e-6■■■■□ 23
ATP6V1A-201ENST00000273398 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
ATP6V1A-201ENST00000273398 MROH2BQ7Z745 1585 aa9.16□□□□□ -0.94
ATP6V1A-201ENST00000273398 KCNA1Q09470 495 aa9.15□□□□□ -0.94
ATP6V1A-201ENST00000273398 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms