RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.61
NXPE3-201ENST00000273347 PLCH2O75038 1416 aa18.89■□□□□ 0.61
NXPE3-201ENST00000273347 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
NXPE3-201ENST00000273347 PLEKHH2Q8IVE3 1493 aa18.88■□□□□ 0.61
NXPE3-201ENST00000273347 ZFYVE16Q7Z3T8 1539 aa18.88■□□□□ 0.61
NXPE3-201ENST00000273347 INO80Q9ULG1 1556 aaPredicted RBP18.86■□□□□ 0.61
NXPE3-201ENST00000273347 ERBINQ96RT1 1412 aa18.86■□□□□ 0.61
NXPE3-201ENST00000273347 CEP152O94986 1710 aa18.86■□□□□ 0.61
NXPE3-201ENST00000273347 FKBP8Q14318 412 aa18.85■□□□□ 0.61
NXPE3-201ENST00000273347 VWDEQ8N2E2 1590 aa18.85■□□□□ 0.61
NXPE3-201ENST00000273347 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
NXPE3-201ENST00000273347 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.61
NXPE3-201ENST00000273347 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.6
NXPE3-201ENST00000273347 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.6
NXPE3-201ENST00000273347 SPHKAPQ2M3C7 1700 aa18.82■□□□□ 0.6
NXPE3-201ENST00000273347 RSPH4AQ5TD94 716 aa18.82■□□□□ 0.6
NXPE3-201ENST00000273347 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
NXPE3-201ENST00000273347 MADDQ8WXG6 1647 aa18.81■□□□□ 0.6
NXPE3-201ENST00000273347 TSPY4P0CV99 314 aa18.81■□□□□ 0.6
NXPE3-201ENST00000273347 TSPY10P0CW01 314 aa18.81■□□□□ 0.6
NXPE3-201ENST00000273347 EIF2AK4Q9P2K8 1649 aaKnown RBP18.78■□□□□ 0.6
NXPE3-201ENST00000273347 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
NXPE3-201ENST00000273347 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
NXPE3-201ENST00000273347 TRPM2O94759 1503 aa18.76■□□□□ 0.59
NXPE3-201ENST00000273347 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
NXPE3-201ENST00000273347 TET3O43151 1660 aa18.75■□□□□ 0.59
NXPE3-201ENST00000273347 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
NXPE3-201ENST00000273347 COL17A1Q9UMD9 1497 aaPredicted RBP18.75■□□□□ 0.59
NXPE3-201ENST00000273347 BCANQ96GW7 911 aa18.74■□□□□ 0.59
NXPE3-201ENST00000273347 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
NXPE3-201ENST00000273347 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
NXPE3-201ENST00000273347 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
NXPE3-201ENST00000273347 MYOM1P52179 1685 aa18.72■□□□□ 0.59
NXPE3-201ENST00000273347 PTPRTO14522 1441 aa18.71■□□□□ 0.59
NXPE3-201ENST00000273347 LRPPRCP42704 1394 aaKnown RBP18.71■□□□□ 0.59
NXPE3-201ENST00000273347 KIDINS220Q9ULH0 1771 aa18.71■□□□□ 0.59
NXPE3-201ENST00000273347 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
NXPE3-201ENST00000273347 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
NXPE3-201ENST00000273347 ST20-MTHFSA0A0A6YYL1 179 aa18.69■□□□□ 0.58
NXPE3-201ENST00000273347 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
NXPE3-201ENST00000273347 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
NXPE3-201ENST00000273347 KIAA1210Q9ULL0 1709 aa18.68■□□□□ 0.58
NXPE3-201ENST00000273347 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
NXPE3-201ENST00000273347 MROH2AA6NES4 1674 aa18.67■□□□□ 0.58
NXPE3-201ENST00000273347 TESK2Q96S53 571 aa18.67■□□□□ 0.58
NXPE3-201ENST00000273347 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
NXPE3-201ENST00000273347 NBPF1Q3BBV0 1214 aa18.67■□□□□ 0.58
NXPE3-201ENST00000273347 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
NXPE3-201ENST00000273347 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
NXPE3-201ENST00000273347 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
NXPE3-201ENST00000273347 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
NXPE3-201ENST00000273347 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
NXPE3-201ENST00000273347 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
NXPE3-201ENST00000273347 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
NXPE3-201ENST00000273347 PPRC1Q5VV67 1664 aaKnown RBP18.63■□□□□ 0.57
NXPE3-201ENST00000273347 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
NXPE3-201ENST00000273347 KDM2AQ9Y2K7 1162 aa18.62■□□□□ 0.57
NXPE3-201ENST00000273347 FRMPD1Q5SYB0 1578 aa18.61■□□□□ 0.57
NXPE3-201ENST00000273347 FANCAO15360 1455 aa18.61■□□□□ 0.57
NXPE3-201ENST00000273347 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
NXPE3-201ENST00000273347 ABCA6Q8N139 1617 aa18.59■□□□□ 0.57
NXPE3-201ENST00000273347 EFCAB6Q5THR3 1501 aa18.58■□□□□ 0.57
NXPE3-201ENST00000273347 EFCAB2Q5VUJ9 269 aa18.57■□□□□ 0.56
NXPE3-201ENST00000273347 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
NXPE3-201ENST00000273347 LMTK2Q8IWU2 1503 aa18.57■□□□□ 0.56
NXPE3-201ENST00000273347 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
NXPE3-201ENST00000273347 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
NXPE3-201ENST00000273347 MAP3K4Q9Y6R4 1608 aa18.56■□□□□ 0.56
NXPE3-201ENST00000273347 IRX6P78412 446 aaPredicted RBP18.56■□□□□ 0.56
NXPE3-201ENST00000273347 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
NXPE3-201ENST00000273347 ZC3H13Q5T200 1668 aaKnown RBP18.55■□□□□ 0.56
NXPE3-201ENST00000273347 AFAP1Q8N556 730 aa18.55■□□□□ 0.56
NXPE3-201ENST00000273347 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
NXPE3-201ENST00000273347 SYNMO15061 1565 aa18.54■□□□□ 0.56
NXPE3-201ENST00000273347 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
NXPE3-201ENST00000273347 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
NXPE3-201ENST00000273347 KIF1BO60333 1816 aa18.54■□□□□ 0.56
NXPE3-201ENST00000273347 ERICH6BQ5W0A0 696 aa18.53■□□□□ 0.56
NXPE3-201ENST00000273347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
NXPE3-201ENST00000273347 SIGLEC1Q9BZZ2 1709 aa18.52■□□□□ 0.56
NXPE3-201ENST00000273347 NEFLP07196 543 aa18.52■□□□□ 0.56
NXPE3-201ENST00000273347 ADGRL1O94910 1474 aa18.52■□□□□ 0.56
NXPE3-201ENST00000273347 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.55
NXPE3-201ENST00000273347 PPLO60437 1756 aa18.51■□□□□ 0.55
NXPE3-201ENST00000273347 MYOM2P54296 1465 aa18.5■□□□□ 0.55
NXPE3-201ENST00000273347 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
NXPE3-201ENST00000273347 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
NXPE3-201ENST00000273347 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
NXPE3-201ENST00000273347 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
NXPE3-201ENST00000273347 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
NXPE3-201ENST00000273347 INSRP06213 1382 aa18.47■□□□□ 0.55
NXPE3-201ENST00000273347 RALBP1Q15311 655 aa18.47■□□□□ 0.55
NXPE3-201ENST00000273347 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
NXPE3-201ENST00000273347 HECW2Q9P2P5 1572 aa18.46■□□□□ 0.55
NXPE3-201ENST00000273347 NUDCQ9Y266 331 aa18.45■□□□□ 0.54
NXPE3-201ENST00000273347 PIK3C2BO00750 1634 aa18.45■□□□□ 0.54
NXPE3-201ENST00000273347 KDM5AP29375 1690 aaKnown RBP18.45■□□□□ 0.54
NXPE3-201ENST00000273347 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
NXPE3-201ENST00000273347 PPP4R2Q9NY27 417 aa18.43■□□□□ 0.54
NXPE3-201ENST00000273347 ZNF518AQ6AHZ1 1483 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms