RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 ADGBQ8N7X0 1667 aa12.63□□□□□ -0.39
TRIM43-201ENST00000272395 REREQ9P2R6 1566 aa12.62□□□□□ -0.39
TRIM43-201ENST00000272395 MIER1Q8N108 512 aa12.61□□□□□ -0.39
TRIM43-201ENST00000272395 SETD5Q9C0A6 1442 aa12.61□□□□□ -0.39
TRIM43-201ENST00000272395 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
TRIM43-201ENST00000272395 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
TRIM43-201ENST00000272395 KIF3BO15066 747 aa12.61□□□□□ -0.39
TRIM43-201ENST00000272395 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
TRIM43-201ENST00000272395 AGLP35573 1532 aa12.6□□□□□ -0.39
TRIM43-201ENST00000272395 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
TRIM43-201ENST00000272395 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
TRIM43-201ENST00000272395 GGT6Q6P531 493 aa12.59□□□□□ -0.39
TRIM43-201ENST00000272395 ERBINQ96RT1 1412 aa12.57□□□□□ -0.4
TRIM43-201ENST00000272395 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
TRIM43-201ENST00000272395 ANKRD50Q9ULJ7 1429 aa12.57□□□□□ -0.4
TRIM43-201ENST00000272395 FOXD1Q16676 465 aa12.56□□□□□ -0.4
TRIM43-201ENST00000272395 NAIPQ13075 1403 aa12.55□□□□□ -0.4
TRIM43-201ENST00000272395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM43-201ENST00000272395 PLPPR3Q6T4P5 718 aa12.54□□□□□ -0.4
TRIM43-201ENST00000272395 MADDQ8WXG6 1647 aa12.54□□□□□ -0.4
TRIM43-201ENST00000272395 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
TRIM43-201ENST00000272395 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
TRIM43-201ENST00000272395 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
TRIM43-201ENST00000272395 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.4
TRIM43-201ENST00000272395 MROH1Q8NDA8 1641 aa12.52□□□□□ -0.41
TRIM43-201ENST00000272395 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
TRIM43-201ENST00000272395 CEBPAP49715 358 aaPredicted RBP12.51□□□□□ -0.41
TRIM43-201ENST00000272395 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
TRIM43-201ENST00000272395 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
TRIM43-201ENST00000272395 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
TRIM43-201ENST00000272395 PTPRMP28827 1452 aa12.49□□□□□ -0.41
TRIM43-201ENST00000272395 FER1L4A9Z1Z3 1794 aa12.49□□□□□ -0.41
TRIM43-201ENST00000272395 GCC2Q8IWJ2 1684 aa12.49□□□□□ -0.41
TRIM43-201ENST00000272395 PRDM15P57071 1507 aaPredicted RBP12.49□□□□□ -0.41
TRIM43-201ENST00000272395 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
TRIM43-201ENST00000272395 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
TRIM43-201ENST00000272395 ABCC3O15438 1527 aa12.47□□□□□ -0.41
TRIM43-201ENST00000272395 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
TRIM43-201ENST00000272395 CLTCQ00610 1675 aaKnown RBP12.47□□□□□ -0.41
TRIM43-201ENST00000272395 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
TRIM43-201ENST00000272395 ZMYM3Q14202 1370 aa12.47□□□□□ -0.41
TRIM43-201ENST00000272395 KANK1Q14678 1352 aa12.47□□□□□ -0.41
TRIM43-201ENST00000272395 CNTLNQ9NXG0 1405 aa12.46□□□□□ -0.41
TRIM43-201ENST00000272395 NUP155O75694 1391 aa12.46□□□□□ -0.42
TRIM43-201ENST00000272395 UNC13BO14795 1591 aa12.45□□□□□ -0.42
TRIM43-201ENST00000272395 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
TRIM43-201ENST00000272395 VWDEQ8N2E2 1590 aa12.44□□□□□ -0.42
TRIM43-201ENST00000272395 FBXO31Q5XUX0 539 aaPredicted RBP12.44□□□□□ -0.42
TRIM43-201ENST00000272395 CEP152O94986 1710 aa12.43□□□□□ -0.42
TRIM43-201ENST00000272395 MSH5O43196 834 aa12.42□□□□□ -0.42
TRIM43-201ENST00000272395 FAM135AQ9P2D6 1515 aa12.42□□□□□ -0.42
TRIM43-201ENST00000272395 C3P01024 1663 aa12.42□□□□□ -0.42
TRIM43-201ENST00000272395 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
TRIM43-201ENST00000272395 NPATQ14207 1427 aa12.41□□□□□ -0.42
TRIM43-201ENST00000272395 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
TRIM43-201ENST00000272395 ZC3H13Q5T200 1668 aaKnown RBP12.41□□□□□ -0.42
TRIM43-201ENST00000272395 CAMSAP1Q5T5Y3 1602 aa12.4□□□□□ -0.42
TRIM43-201ENST00000272395 PZPP20742 1482 aa12.4□□□□□ -0.42
TRIM43-201ENST00000272395 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
TRIM43-201ENST00000272395 EFCAB6Q5THR3 1501 aa12.39□□□□□ -0.43
TRIM43-201ENST00000272395 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
TRIM43-201ENST00000272395 ARHGAP31Q2M1Z3 1444 aa12.38□□□□□ -0.43
TRIM43-201ENST00000272395 ERVK-7P63135 1459 aa12.37□□□□□ -0.43
TRIM43-201ENST00000272395 PKD2Q13563 968 aa12.37□□□□□ -0.43
TRIM43-201ENST00000272395 POTEHQ6S545 545 aa12.37□□□□□ -0.43
TRIM43-201ENST00000272395 TNRQ92752 1358 aa12.37□□□□□ -0.43
TRIM43-201ENST00000272395 TET3O43151 1660 aa12.36□□□□□ -0.43
TRIM43-201ENST00000272395 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
TRIM43-201ENST00000272395 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
TRIM43-201ENST00000272395 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
TRIM43-201ENST00000272395 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
TRIM43-201ENST00000272395 E9PCH4 1651 aa12.34□□□□□ -0.43
TRIM43-201ENST00000272395 RPRD2Q5VT52 1461 aaKnown RBP12.33□□□□□ -0.44
TRIM43-201ENST00000272395 NOS1P29475 1434 aa12.33□□□□□ -0.44
TRIM43-201ENST00000272395 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
TRIM43-201ENST00000272395 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
TRIM43-201ENST00000272395 SYNMO15061 1565 aa12.32□□□□□ -0.44
TRIM43-201ENST00000272395 LMTK3Q96Q04 1460 aa12.31□□□□□ -0.44
TRIM43-201ENST00000272395 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
TRIM43-201ENST00000272395 MYO3AQ8NEV4 1616 aa12.31□□□□□ -0.44
TRIM43-201ENST00000272395 HSPA2P54652 639 aa12.31□□□□□ -0.44
TRIM43-201ENST00000272395 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
TRIM43-201ENST00000272395 PLA2R1Q13018 1463 aa12.3□□□□□ -0.44
TRIM43-201ENST00000272395 IDI1Q13907 227 aa12.29□□□□□ -0.44
TRIM43-201ENST00000272395 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
TRIM43-201ENST00000272395 PTPRTO14522 1441 aa12.29□□□□□ -0.44
TRIM43-201ENST00000272395 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
TRIM43-201ENST00000272395 CEP170BQ9Y4F5 1589 aaPredicted RBP12.27□□□□□ -0.44
TRIM43-201ENST00000272395 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
TRIM43-201ENST00000272395 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
TRIM43-201ENST00000272395 TRPM2O94759 1503 aa12.26□□□□□ -0.45
TRIM43-201ENST00000272395 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
TRIM43-201ENST00000272395 SPHKAPQ2M3C7 1700 aa12.25□□□□□ -0.45
TRIM43-201ENST00000272395 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
TRIM43-201ENST00000272395 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
TRIM43-201ENST00000272395 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
TRIM43-201ENST00000272395 CLTCL1P53675 1640 aa12.24□□□□□ -0.45
TRIM43-201ENST00000272395 ZNF142P52746 1687 aaPredicted RBP12.24□□□□□ -0.45
TRIM43-201ENST00000272395 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
TRIM43-201ENST00000272395 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms