RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 CAMSAP2Q08AD1 1489 aa20.22■□□□□ 0.83
SCAMP2-201ENST00000268099 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
SCAMP2-201ENST00000268099 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
SCAMP2-201ENST00000268099 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
SCAMP2-201ENST00000268099 CROCC2H7BZ55 1655 aa20.21■□□□□ 0.83
SCAMP2-201ENST00000268099 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
SCAMP2-201ENST00000268099 INSRP06213 1382 aa20.19■□□□□ 0.82
SCAMP2-201ENST00000268099 ZMYM4Q5VZL5 1548 aa20.19■□□□□ 0.82
SCAMP2-201ENST00000268099 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
SCAMP2-201ENST00000268099 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
SCAMP2-201ENST00000268099 FAM161AQ3B820 660 aa20.17■□□□□ 0.82
SCAMP2-201ENST00000268099 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
SCAMP2-201ENST00000268099 PLEKHH2Q8IVE3 1493 aa20.17■□□□□ 0.82
SCAMP2-201ENST00000268099 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
SCAMP2-201ENST00000268099 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
SCAMP2-201ENST00000268099 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
SCAMP2-201ENST00000268099 C8orf34Q49A92 452 aa20.16■□□□□ 0.82
SCAMP2-201ENST00000268099 KDM2AQ9Y2K7 1162 aa20.16■□□□□ 0.82
SCAMP2-201ENST00000268099 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
SCAMP2-201ENST00000268099 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
SCAMP2-201ENST00000268099 FAM43AQ8N2R8 423 aa20.15■□□□□ 0.82
SCAMP2-201ENST00000268099 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
SCAMP2-201ENST00000268099 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.81
SCAMP2-201ENST00000268099 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
SCAMP2-201ENST00000268099 PER1O15534 1290 aaPredicted RBP20.13■□□□□ 0.81
SCAMP2-201ENST00000268099 RSPH6AQ9H0K4 717 aa20.13■□□□□ 0.81
SCAMP2-201ENST00000268099 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
SCAMP2-201ENST00000268099 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
SCAMP2-201ENST00000268099 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
SCAMP2-201ENST00000268099 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
SCAMP2-201ENST00000268099 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
SCAMP2-201ENST00000268099 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
SCAMP2-201ENST00000268099 NUP155O75694 1391 aa20.1■□□□□ 0.81
SCAMP2-201ENST00000268099 KIAA0556O60303 1618 aa20.08■□□□□ 0.81
SCAMP2-201ENST00000268099 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.81
SCAMP2-201ENST00000268099 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.81
SCAMP2-201ENST00000268099 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.81
SCAMP2-201ENST00000268099 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
SCAMP2-201ENST00000268099 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.8
SCAMP2-201ENST00000268099 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
SCAMP2-201ENST00000268099 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
SCAMP2-201ENST00000268099 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
SCAMP2-201ENST00000268099 VIRMAQ69YN4 1812 aaKnown RBP20.04■□□□□ 0.8
SCAMP2-201ENST00000268099 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
SCAMP2-201ENST00000268099 ADCY10Q96PN6 1610 aa20.03■□□□□ 0.8
SCAMP2-201ENST00000268099 RGS3P49796 1198 aa20.02■□□□□ 0.8
SCAMP2-201ENST00000268099 PRAG1Q86YV5 1406 aa20.02■□□□□ 0.8
SCAMP2-201ENST00000268099 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
SCAMP2-201ENST00000268099 GOLGA6L2Q8N9W4 650 aaPredicted RBP20■□□□□ 0.79
SCAMP2-201ENST00000268099 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
SCAMP2-201ENST00000268099 CDC42BPAQ5VT25 1732 aa19.99■□□□□ 0.79
SCAMP2-201ENST00000268099 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
SCAMP2-201ENST00000268099 DISP3Q9P2K9 1392 aa19.99■□□□□ 0.79
SCAMP2-201ENST00000268099 PLEKHH1Q9ULM0 1364 aa19.99■□□□□ 0.79
SCAMP2-201ENST00000268099 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
SCAMP2-201ENST00000268099 PANK3Q9H999 370 aa19.98■□□□□ 0.79
SCAMP2-201ENST00000268099 PTPRGP23470 1445 aa19.98■□□□□ 0.79
SCAMP2-201ENST00000268099 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
SCAMP2-201ENST00000268099 EIF4G3O43432 1585 aaKnown RBP19.97■□□□□ 0.79
SCAMP2-201ENST00000268099 LAMC1P11047 1609 aa19.97■□□□□ 0.79
SCAMP2-201ENST00000268099 POGKQ9P215 609 aa19.97■□□□□ 0.79
SCAMP2-201ENST00000268099 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
SCAMP2-201ENST00000268099 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
SCAMP2-201ENST00000268099 PRDM15P57071 1507 aaPredicted RBP19.95■□□□□ 0.78
SCAMP2-201ENST00000268099 TESK2Q96S53 571 aa19.95■□□□□ 0.78
SCAMP2-201ENST00000268099 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
SCAMP2-201ENST00000268099 USP19O94966 1318 aa19.94■□□□□ 0.78
SCAMP2-201ENST00000268099 GOLGA2Q08379 1002 aa19.94■□□□□ 0.78
SCAMP2-201ENST00000268099 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
SCAMP2-201ENST00000268099 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
SCAMP2-201ENST00000268099 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
SCAMP2-201ENST00000268099 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
SCAMP2-201ENST00000268099 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
SCAMP2-201ENST00000268099 L1TD1Q5T7N2 865 aaKnown RBP19.91■□□□□ 0.78
SCAMP2-201ENST00000268099 BECN1Q14457 450 aa19.89■□□□□ 0.77
SCAMP2-201ENST00000268099 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
SCAMP2-201ENST00000268099 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
SCAMP2-201ENST00000268099 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
SCAMP2-201ENST00000268099 SLFN5Q08AF3 891 aa19.88■□□□□ 0.77
SCAMP2-201ENST00000268099 TMF1P82094 1093 aa19.87■□□□□ 0.77
SCAMP2-201ENST00000268099 RGL3Q3MIN7 710 aa19.87■□□□□ 0.77
SCAMP2-201ENST00000268099 A2MP01023 1474 aa19.86■□□□□ 0.77
SCAMP2-201ENST00000268099 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
SCAMP2-201ENST00000268099 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
SCAMP2-201ENST00000268099 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
SCAMP2-201ENST00000268099 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
SCAMP2-201ENST00000268099 MYO5CQ9NQX4 1742 aa19.85■□□□□ 0.77
SCAMP2-201ENST00000268099 EIF2AK4Q9P2K8 1649 aaKnown RBP19.85■□□□□ 0.77
SCAMP2-201ENST00000268099 SEC24BO95487 1268 aa19.84■□□□□ 0.77
SCAMP2-201ENST00000268099 TRMT2AQ8IZ69 625 aaKnown RBP19.84■□□□□ 0.77
SCAMP2-201ENST00000268099 IGHDP01880 384 aa19.84■□□□□ 0.77
SCAMP2-201ENST00000268099 ABCC10Q5T3U5 1492 aa19.84■□□□□ 0.77
SCAMP2-201ENST00000268099 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.77
SCAMP2-201ENST00000268099 NLRP1Q9C000 1473 aa19.83■□□□□ 0.77
SCAMP2-201ENST00000268099 MAPK8IP3Q9UPT6 1336 aa19.83■□□□□ 0.76
SCAMP2-201ENST00000268099 ANTXR1Q9H6X2 564 aa19.82■□□□□ 0.76
SCAMP2-201ENST00000268099 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
SCAMP2-201ENST00000268099 BCAR3O75815 825 aa19.81■□□□□ 0.76
SCAMP2-201ENST00000268099 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
SCAMP2-201ENST00000268099 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms