RNA–Protein interactions for RNA: ENST00000268082.4

CCDC33-201, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best) BASIC

Gene CCDC33, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-201ENST00000268082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC33-201ENST00000268082 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
CCDC33-201ENST00000268082 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
CCDC33-201ENST00000268082 E9PCH4 1651 aa17.46■□□□□ 0.39
CCDC33-201ENST00000268082 SYCP2Q9BX26 1530 aa17.46■□□□□ 0.39
CCDC33-201ENST00000268082 PPRC1Q5VV67 1664 aaKnown RBP17.46■□□□□ 0.39
CCDC33-201ENST00000268082 IQGAP3Q86VI3 1631 aa17.46■□□□□ 0.39
CCDC33-201ENST00000268082 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
CCDC33-201ENST00000268082 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
CCDC33-201ENST00000268082 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
CCDC33-201ENST00000268082 LAMC1P11047 1609 aa17.43■□□□□ 0.38
CCDC33-201ENST00000268082 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
CCDC33-201ENST00000268082 MAP3K4Q9Y6R4 1608 aa17.42■□□□□ 0.38
CCDC33-201ENST00000268082 BCANQ96GW7 911 aa17.42■□□□□ 0.38
CCDC33-201ENST00000268082 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
CCDC33-201ENST00000268082 GLI2P10070 1586 aa17.41■□□□□ 0.38
CCDC33-201ENST00000268082 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC33-201ENST00000268082 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
CCDC33-201ENST00000268082 CCDC184Q52MB2 194 aa17.39■□□□□ 0.37
CCDC33-201ENST00000268082 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
CCDC33-201ENST00000268082 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
CCDC33-201ENST00000268082 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
CCDC33-201ENST00000268082 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
CCDC33-201ENST00000268082 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
CCDC33-201ENST00000268082 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
CCDC33-201ENST00000268082 ABCC1P33527 1531 aa17.33■□□□□ 0.37
CCDC33-201ENST00000268082 ERBINQ96RT1 1412 aa17.33■□□□□ 0.36
CCDC33-201ENST00000268082 ATP10AO60312 1499 aa17.33■□□□□ 0.36
CCDC33-201ENST00000268082 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
CCDC33-201ENST00000268082 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
CCDC33-201ENST00000268082 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
CCDC33-201ENST00000268082 ARAP3Q8WWN8 1544 aa17.32■□□□□ 0.36
CCDC33-201ENST00000268082 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
CCDC33-201ENST00000268082 COL17A1Q9UMD9 1497 aaPredicted RBP17.32■□□□□ 0.36
CCDC33-201ENST00000268082 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
CCDC33-201ENST00000268082 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
CCDC33-201ENST00000268082 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
CCDC33-201ENST00000268082 RNF17Q9BXT8 1623 aaKnown RBP17.3■□□□□ 0.36
CCDC33-201ENST00000268082 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
CCDC33-201ENST00000268082 PLCH2O75038 1416 aa17.3■□□□□ 0.36
CCDC33-201ENST00000268082 PLA2R1Q13018 1463 aa17.29■□□□□ 0.36
CCDC33-201ENST00000268082 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
CCDC33-201ENST00000268082 A2MP01023 1474 aa17.28■□□□□ 0.36
CCDC33-201ENST00000268082 CEP152O94986 1710 aa17.26■□□□□ 0.35
CCDC33-201ENST00000268082 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
CCDC33-201ENST00000268082 DEPDC5O75140 1603 aa17.26■□□□□ 0.35
CCDC33-201ENST00000268082 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
CCDC33-201ENST00000268082 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
CCDC33-201ENST00000268082 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
CCDC33-201ENST00000268082 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
CCDC33-201ENST00000268082 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
CCDC33-201ENST00000268082 RTEL1-TNFRSF6BF6WH68 1400 aa17.21■□□□□ 0.35
CCDC33-201ENST00000268082 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
CCDC33-201ENST00000268082 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
CCDC33-201ENST00000268082 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
CCDC33-201ENST00000268082 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
CCDC33-201ENST00000268082 TET3O43151 1660 aa17.19■□□□□ 0.34
CCDC33-201ENST00000268082 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
CCDC33-201ENST00000268082 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
CCDC33-201ENST00000268082 LRPPRCP42704 1394 aaKnown RBP17.19■□□□□ 0.34
CCDC33-201ENST00000268082 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
CCDC33-201ENST00000268082 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
CCDC33-201ENST00000268082 TRPM2O94759 1503 aa17.18■□□□□ 0.34
CCDC33-201ENST00000268082 RALBP1Q15311 655 aa17.18■□□□□ 0.34
CCDC33-201ENST00000268082 FANCAO15360 1455 aa17.17■□□□□ 0.34
CCDC33-201ENST00000268082 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
CCDC33-201ENST00000268082 PNISRQ8TF01 805 aaKnown RBP17.17■□□□□ 0.34
CCDC33-201ENST00000268082 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
CCDC33-201ENST00000268082 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
CCDC33-201ENST00000268082 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
CCDC33-201ENST00000268082 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
CCDC33-201ENST00000268082 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
CCDC33-201ENST00000268082 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
CCDC33-201ENST00000268082 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
CCDC33-201ENST00000268082 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
CCDC33-201ENST00000268082 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
CCDC33-201ENST00000268082 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
CCDC33-201ENST00000268082 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
CCDC33-201ENST00000268082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC33-201ENST00000268082 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
CCDC33-201ENST00000268082 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
CCDC33-201ENST00000268082 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
CCDC33-201ENST00000268082 FRMPD1Q5SYB0 1578 aa17.11■□□□□ 0.33
CCDC33-201ENST00000268082 NEO1Q92859 1461 aa17.11■□□□□ 0.33
CCDC33-201ENST00000268082 PTPRTO14522 1441 aa17.1■□□□□ 0.33
CCDC33-201ENST00000268082 INSRP06213 1382 aa17.1■□□□□ 0.33
CCDC33-201ENST00000268082 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
CCDC33-201ENST00000268082 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
CCDC33-201ENST00000268082 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
CCDC33-201ENST00000268082 TESK2Q96S53 571 aa17.08■□□□□ 0.33
CCDC33-201ENST00000268082 RICTORQ6R327 1708 aa17.08■□□□□ 0.32
CCDC33-201ENST00000268082 IFT172Q9UG01 1749 aa17.08■□□□□ 0.32
CCDC33-201ENST00000268082 SCAPERQ9BY12 1400 aa17.08■□□□□ 0.32
CCDC33-201ENST00000268082 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
CCDC33-201ENST00000268082 KIF1BO60333 1816 aa17.07■□□□□ 0.32
CCDC33-201ENST00000268082 CFAP74Q9C0B2 1584 aa17.07■□□□□ 0.32
CCDC33-201ENST00000268082 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
CCDC33-201ENST00000268082 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
CCDC33-201ENST00000268082 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
CCDC33-201ENST00000268082 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms