RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 ESF1Q9H501 851 aaKnown RBP24.8■■□□□ 1.56
SNRPF-201ENST00000266735 NAIPQ13075 1403 aa24.79■■□□□ 1.56
SNRPF-201ENST00000266735 RNF17Q9BXT8 1623 aaKnown RBP24.76■■□□□ 1.55
SNRPF-201ENST00000266735 CNTLNQ9NXG0 1405 aa24.76■■□□□ 1.55
SNRPF-201ENST00000266735 MADDQ8WXG6 1647 aa24.75■■□□□ 1.55
SNRPF-201ENST00000266735 FAM135AQ9P2D6 1515 aa24.74■■□□□ 1.55
SNRPF-201ENST00000266735 WASHC2CQ9Y4E1 1318 aa24.73■■□□□ 1.55
SNRPF-201ENST00000266735 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
SNRPF-201ENST00000266735 PRDM15P57071 1507 aaPredicted RBP24.72■■□□□ 1.55
SNRPF-201ENST00000266735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.71■■□□□ 1.55
SNRPF-201ENST00000266735 KANK1Q14678 1352 aa24.7■■□□□ 1.55
SNRPF-201ENST00000266735 KDM5DQ9BY66 1539 aa24.7■■□□□ 1.54
SNRPF-201ENST00000266735 PTPRMP28827 1452 aa24.7■■□□□ 1.54
SNRPF-201ENST00000266735 DEPDC5O75140 1603 aa24.69■■□□□ 1.54
SNRPF-201ENST00000266735 MROH1Q8NDA8 1641 aa24.69■■□□□ 1.54
SNRPF-201ENST00000266735 GCC2Q8IWJ2 1684 aa24.69■■□□□ 1.54
SNRPF-201ENST00000266735 FER1L4A9Z1Z3 1794 aa24.68■■□□□ 1.54
SNRPF-201ENST00000266735 SETD5Q9C0A6 1442 aa24.66■■□□□ 1.54
SNRPF-201ENST00000266735 ZMYM3Q14202 1370 aa24.65■■□□□ 1.54
SNRPF-201ENST00000266735 RIMS1Q86UR5 1692 aaKnown RBP24.65■■□□□ 1.54
SNRPF-201ENST00000266735 ABCC3O15438 1527 aa24.65■■□□□ 1.54
SNRPF-201ENST00000266735 UNC13BO14795 1591 aa24.64■■□□□ 1.53
SNRPF-201ENST00000266735 VWDEQ8N2E2 1590 aa24.62■■□□□ 1.53
SNRPF-201ENST00000266735 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
SNRPF-201ENST00000266735 NUP155O75694 1391 aa24.62■■□□□ 1.53
SNRPF-201ENST00000266735 ZC3H13Q5T200 1668 aaKnown RBP24.61■■□□□ 1.53
SNRPF-201ENST00000266735 LMTK2Q8IWU2 1503 aa24.61■■□□□ 1.53
SNRPF-201ENST00000266735 CLTCQ00610 1675 aaKnown RBP24.61■■□□□ 1.53
SNRPF-201ENST00000266735 MROH2AA6NES4 1674 aa24.59■■□□□ 1.53
SNRPF-201ENST00000266735 CEBPAP49715 358 aaPredicted RBP24.59■■□□□ 1.53
SNRPF-201ENST00000266735 RAB3GAP2Q9H2M9 1393 aa24.58■■□□□ 1.53
SNRPF-201ENST00000266735 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
SNRPF-201ENST00000266735 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
SNRPF-201ENST00000266735 PZPP20742 1482 aa24.56■■□□□ 1.52
SNRPF-201ENST00000266735 ARHGAP31Q2M1Z3 1444 aa24.56■■□□□ 1.52
SNRPF-201ENST00000266735 HRCP23327 699 aa24.54■■□□□ 1.52
SNRPF-201ENST00000266735 NPATQ14207 1427 aa24.53■■□□□ 1.52
SNRPF-201ENST00000266735 IQGAP3Q86VI3 1631 aa24.53■■□□□ 1.52
SNRPF-201ENST00000266735 C3P01024 1663 aa24.52■■□□□ 1.52
SNRPF-201ENST00000266735 CAMSAP1Q5T5Y3 1602 aa24.51■■□□□ 1.51
SNRPF-201ENST00000266735 CEP152O94986 1710 aa24.51■■□□□ 1.51
SNRPF-201ENST00000266735 EFCAB6Q5THR3 1501 aa24.51■■□□□ 1.51
SNRPF-201ENST00000266735 FBXO31Q5XUX0 539 aaPredicted RBP24.48■■□□□ 1.51
SNRPF-201ENST00000266735 RPRD2Q5VT52 1461 aaKnown RBP24.48■■□□□ 1.51
SNRPF-201ENST00000266735 TET3O43151 1660 aa24.47■■□□□ 1.51
SNRPF-201ENST00000266735 SLC4A1APQ9BWU0 796 aaKnown RBP24.46■■□□□ 1.51
SNRPF-201ENST00000266735 ERVK-7P63135 1459 aa24.45■■□□□ 1.5
SNRPF-201ENST00000266735 TNRQ92752 1358 aa24.44■■□□□ 1.5
SNRPF-201ENST00000266735 SPATA31D1Q6ZQQ2 1576 aa24.43■■□□□ 1.5
SNRPF-201ENST00000266735 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
SNRPF-201ENST00000266735 NOS1P29475 1434 aa24.4■■□□□ 1.5
SNRPF-201ENST00000266735 UHRF1BP1Q6BDS2 1440 aa24.4■■□□□ 1.5
SNRPF-201ENST00000266735 PKD2Q13563 968 aa24.4■■□□□ 1.5
SNRPF-201ENST00000266735 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.49
SNRPF-201ENST00000266735 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
SNRPF-201ENST00000266735 E9PCH4 1651 aa24.36■■□□□ 1.49
SNRPF-201ENST00000266735 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
SNRPF-201ENST00000266735 SLC52A1Q9NWF4 448 aa24.33■■□□□ 1.49
SNRPF-201ENST00000266735 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.48
SNRPF-201ENST00000266735 PTPRTO14522 1441 aa24.33■■□□□ 1.48
SNRPF-201ENST00000266735 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
SNRPF-201ENST00000266735 A2ML1A8K2U0 1454 aa24.3■■□□□ 1.48
SNRPF-201ENST00000266735 SYNMO15061 1565 aa24.29■■□□□ 1.48
SNRPF-201ENST00000266735 SETD1BQ9UPS6 1966 aaKnown RBP24.28■■□□□ 1.48
SNRPF-201ENST00000266735 IDI1Q13907 227 aa24.28■■□□□ 1.48
SNRPF-201ENST00000266735 FOXD1Q16676 465 aa24.28■■□□□ 1.48
SNRPF-201ENST00000266735 CEP170BQ9Y4F5 1589 aaPredicted RBP24.28■■□□□ 1.48
SNRPF-201ENST00000266735 TRPM2O94759 1503 aa24.25■■□□□ 1.47
SNRPF-201ENST00000266735 PLA2R1Q13018 1463 aa24.25■■□□□ 1.47
SNRPF-201ENST00000266735 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
SNRPF-201ENST00000266735 UGGT1Q9NYU2 1555 aa24.23■■□□□ 1.47
SNRPF-201ENST00000266735 HSPA2P54652 639 aa24.22■■□□□ 1.47
SNRPF-201ENST00000266735 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
SNRPF-201ENST00000266735 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
SNRPF-201ENST00000266735 THEMISQ8N1K5 641 aaPredicted RBP24.21■■□□□ 1.47
SNRPF-201ENST00000266735 PIK3C2BO00750 1634 aa24.2■■□□□ 1.46
SNRPF-201ENST00000266735 CCDC144AA2RUR9 1427 aa24.18■■□□□ 1.46
SNRPF-201ENST00000266735 CFAP65Q6ZU64 1925 aaKnown RBP24.17■■□□□ 1.46
SNRPF-201ENST00000266735 ADGRB3O60242 1522 aa24.16■■□□□ 1.46
SNRPF-201ENST00000266735 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
SNRPF-201ENST00000266735 CHGAP10645 457 aaKnown RBP24.16■■□□□ 1.46
SNRPF-201ENST00000266735 DHX57Q6P158 1386 aaKnown RBP24.15■■□□□ 1.46
SNRPF-201ENST00000266735 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
SNRPF-201ENST00000266735 KDM5AP29375 1690 aaKnown RBP24.13■■□□□ 1.45
SNRPF-201ENST00000266735 UBR1Q8IWV7 1749 aa24.12■■□□□ 1.45
SNRPF-201ENST00000266735 TMEM2Q9UHN6 1383 aa24.12■■□□□ 1.45
SNRPF-201ENST00000266735 ANKLE2Q86XL3 938 aa24.09■■□□□ 1.45
SNRPF-201ENST00000266735 TMEM131LA2VDJ0 1609 aa24.09■■□□□ 1.45
SNRPF-201ENST00000266735 SLIT1O75093 1534 aa24.09■■□□□ 1.45
SNRPF-201ENST00000266735 ARHGAP23Q9P227 1491 aa24.09■■□□□ 1.45
SNRPF-201ENST00000266735 HDGFP51858 240 aaKnown RBP24.06■■□□□ 1.44
SNRPF-201ENST00000266735 EID1Q9Y6B2 187 aa24.06■■□□□ 1.44
SNRPF-201ENST00000266735 ZNF326Q5BKZ1 582 aaKnown RBP24.05■■□□□ 1.44
SNRPF-201ENST00000266735 TXNDC2Q86VQ3 553 aa24.04■■□□□ 1.44
SNRPF-201ENST00000266735 NCKAP5LQ9HCH0 1330 aa24.04■■□□□ 1.44
SNRPF-201ENST00000266735 SPATA31E1Q6ZUB1 1445 aa24.03■■□□□ 1.44
SNRPF-201ENST00000266735 RIMS2Q9UQ26 1411 aa24.03■■□□□ 1.44
SNRPF-201ENST00000266735 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
SNRPF-201ENST00000266735 SCAF11Q99590 1463 aaKnown RBP24.02■■□□□ 1.44
SNRPF-201ENST00000266735 ZFYVE9O95405 1425 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms