RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 MAST1Q9Y2H9 1570 aa17.98■□□□□ 0.47
PRPF6-201ENST00000266079 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
PRPF6-201ENST00000266079 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
PRPF6-201ENST00000266079 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
PRPF6-201ENST00000266079 PKD2Q13563 968 aa17.96■□□□□ 0.47
PRPF6-201ENST00000266079 MLECQ14165 292 aa17.96■□□□□ 0.47
PRPF6-201ENST00000266079 DUOX2Q9NRD8 1548 aa17.95■□□□□ 0.46
PRPF6-201ENST00000266079 KDM5CP41229 1560 aa17.95■□□□□ 0.46
PRPF6-201ENST00000266079 PLXNC1O60486 1568 aa17.95■□□□□ 0.46
PRPF6-201ENST00000266079 RICTORQ6R327 1708 aa17.94■□□□□ 0.46
PRPF6-201ENST00000266079 HECW2Q9P2P5 1572 aa17.94■□□□□ 0.46
PRPF6-201ENST00000266079 FRMPD1Q5SYB0 1578 aa17.94■□□□□ 0.46
PRPF6-201ENST00000266079 MLH3Q9UHC1 1453 aa17.94■□□□□ 0.46
PRPF6-201ENST00000266079 DHX29Q7Z478 1369 aaKnown RBP17.94■□□□□ 0.46
PRPF6-201ENST00000266079 A2MP01023 1474 aa17.93■□□□□ 0.46
PRPF6-201ENST00000266079 ABCA6Q8N139 1617 aa17.91■□□□□ 0.46
PRPF6-201ENST00000266079 PZPP20742 1482 aa17.9■□□□□ 0.46
PRPF6-201ENST00000266079 ERBINQ96RT1 1412 aa17.9■□□□□ 0.46
PRPF6-201ENST00000266079 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
PRPF6-201ENST00000266079 DIP2CQ9Y2E4 1556 aa17.87■□□□□ 0.45
PRPF6-201ENST00000266079 FAM135AQ9P2D6 1515 aa17.84■□□□□ 0.45
PRPF6-201ENST00000266079 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
PRPF6-201ENST00000266079 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
PRPF6-201ENST00000266079 KANK1Q14678 1352 aa17.82■□□□□ 0.44
PRPF6-201ENST00000266079 ATP10AO60312 1499 aa17.82■□□□□ 0.44
PRPF6-201ENST00000266079 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
PRPF6-201ENST00000266079 ANKRD30BQ9BXX2 1392 aa17.79■□□□□ 0.44
PRPF6-201ENST00000266079 MAGI2Q86UL8 1455 aa17.78■□□□□ 0.44
PRPF6-201ENST00000266079 UNC13BO14795 1591 aa17.78■□□□□ 0.44
PRPF6-201ENST00000266079 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
PRPF6-201ENST00000266079 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
PRPF6-201ENST00000266079 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
PRPF6-201ENST00000266079 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
PRPF6-201ENST00000266079 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
PRPF6-201ENST00000266079 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
PRPF6-201ENST00000266079 ARHGEF40Q8TER5 1519 aa17.73■□□□□ 0.43
PRPF6-201ENST00000266079 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
PRPF6-201ENST00000266079 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
PRPF6-201ENST00000266079 IQGAP3Q86VI3 1631 aa17.72■□□□□ 0.43
PRPF6-201ENST00000266079 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
PRPF6-201ENST00000266079 L3MBTL2Q969R5 705 aa17.71■□□□□ 0.43
PRPF6-201ENST00000266079 PRDM15P57071 1507 aaPredicted RBP17.71■□□□□ 0.43
PRPF6-201ENST00000266079 DEPDC5O75140 1603 aa17.7■□□□□ 0.42
PRPF6-201ENST00000266079 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
PRPF6-201ENST00000266079 FBXO31Q5XUX0 539 aaPredicted RBP17.7■□□□□ 0.42
PRPF6-201ENST00000266079 KDM2AQ9Y2K7 1162 aa17.7■□□□□ 0.42
PRPF6-201ENST00000266079 CEP152O94986 1710 aa17.7■□□□□ 0.42
PRPF6-201ENST00000266079 PLA2R1Q13018 1463 aa17.69■□□□□ 0.42
PRPF6-201ENST00000266079 CCDC144AA2RUR9 1427 aa17.68■□□□□ 0.42
PRPF6-201ENST00000266079 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
PRPF6-201ENST00000266079 RNF17Q9BXT8 1623 aaKnown RBP17.66■□□□□ 0.42
PRPF6-201ENST00000266079 NPATQ14207 1427 aa17.66■□□□□ 0.42
PRPF6-201ENST00000266079 E9PCH4 1651 aa17.66■□□□□ 0.42
PRPF6-201ENST00000266079 ABCC3O15438 1527 aa17.66■□□□□ 0.42
PRPF6-201ENST00000266079 CEBPAP49715 358 aaPredicted RBP17.65■□□□□ 0.42
PRPF6-201ENST00000266079 VWDEQ8N2E2 1590 aa17.65■□□□□ 0.42
PRPF6-201ENST00000266079 RPRD2Q5VT52 1461 aaKnown RBP17.64■□□□□ 0.42
PRPF6-201ENST00000266079 UGGT1Q9NYU2 1555 aa17.64■□□□□ 0.42
PRPF6-201ENST00000266079 BCANQ96GW7 911 aa17.64■□□□□ 0.41
PRPF6-201ENST00000266079 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
PRPF6-201ENST00000266079 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
PRPF6-201ENST00000266079 TET3O43151 1660 aa17.62■□□□□ 0.41
PRPF6-201ENST00000266079 FKBP8Q14318 412 aa17.62■□□□□ 0.41
PRPF6-201ENST00000266079 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
PRPF6-201ENST00000266079 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
PRPF6-201ENST00000266079 AGLP35573 1532 aa17.61■□□□□ 0.41
PRPF6-201ENST00000266079 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
PRPF6-201ENST00000266079 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
PRPF6-201ENST00000266079 REREQ9P2R6 1566 aa17.59■□□□□ 0.41
PRPF6-201ENST00000266079 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.4
PRPF6-201ENST00000266079 BCORL1Q5H9F3 1711 aa17.57■□□□□ 0.4
PRPF6-201ENST00000266079 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
PRPF6-201ENST00000266079 CAMSAP1Q5T5Y3 1602 aa17.57■□□□□ 0.4
PRPF6-201ENST00000266079 ZMYM3Q14202 1370 aa17.57■□□□□ 0.4
PRPF6-201ENST00000266079 LMTK2Q8IWU2 1503 aa17.57■□□□□ 0.4
PRPF6-201ENST00000266079 TIMELESSQ9UNS1 1208 aa17.56■□□□□ 0.4
PRPF6-201ENST00000266079 IDI1Q13907 227 aa17.56■□□□□ 0.4
PRPF6-201ENST00000266079 PTPRTO14522 1441 aa17.55■□□□□ 0.4
PRPF6-201ENST00000266079 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
PRPF6-201ENST00000266079 SPHKAPQ2M3C7 1700 aa17.54■□□□□ 0.4
PRPF6-201ENST00000266079 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
PRPF6-201ENST00000266079 CLTCL1P53675 1640 aa17.53■□□□□ 0.4
PRPF6-201ENST00000266079 TRPM2O94759 1503 aa17.52■□□□□ 0.4
PRPF6-201ENST00000266079 NEFLP07196 543 aa17.5■□□□□ 0.39
PRPF6-201ENST00000266079 NOS1P29475 1434 aa17.49■□□□□ 0.39
PRPF6-201ENST00000266079 ARHGAP31Q2M1Z3 1444 aa17.49■□□□□ 0.39
PRPF6-201ENST00000266079 CNTLNQ9NXG0 1405 aa17.48■□□□□ 0.39
PRPF6-201ENST00000266079 ZC3H13Q5T200 1668 aaKnown RBP17.48■□□□□ 0.39
PRPF6-201ENST00000266079 SYNMO15061 1565 aa17.47■□□□□ 0.39
PRPF6-201ENST00000266079 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
PRPF6-201ENST00000266079 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
PRPF6-201ENST00000266079 SLC52A1Q9NWF4 448 aa17.45■□□□□ 0.38
PRPF6-201ENST00000266079 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
PRPF6-201ENST00000266079 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
PRPF6-201ENST00000266079 ADGRF5Q8IZF2 1346 aa17.44■□□□□ 0.38
PRPF6-201ENST00000266079 MSH5O43196 834 aa17.43■□□□□ 0.38
PRPF6-201ENST00000266079 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
PRPF6-201ENST00000266079 TNRQ92752 1358 aa17.43■□□□□ 0.38
PRPF6-201ENST00000266079 FER1L4A9Z1Z3 1794 aa17.42■□□□□ 0.38
PRPF6-201ENST00000266079 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms