RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DDX49Q9Y6V7 483 aaKnown RBP6.68□□□□□ -1.34
XRN1-201ENST00000264951 CENPQQ7L2Z9 268 aaPredicted RBP6.68□□□□□ -1.34
XRN1-201ENST00000264951 CHIC2Q9UKJ5 165 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 CEP164Q9UPV0 1460 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 A0A0G2JS52 829 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 PES1O00541 588 aaKnown RBP6.67□□□□□ -1.34
XRN1-201ENST00000264951 SLKQ9H2G2 1235 aaPredicted RBP6.67□□□□□ -1.34
XRN1-201ENST00000264951 CCDC39Q9UFE4 941 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 RB1CC1Q8TDY2 1594 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 RUFY2Q8WXA3 655 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 RABEP1Q15276 862 aa6.67□□□□□ -1.34
XRN1-201ENST00000264951 GZF1Q9H116 711 aaPredicted RBP6.67□□□□□ -1.34
XRN1-201ENST00000264951 FAM161AQ3B820 660 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 FAM107BQ9H098 131 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 LUC7LQ9NQ29 371 aaKnown RBP6.66□□□□□ -1.34
XRN1-201ENST00000264951 MRE11P49959 708 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 RNF20Q5VTR2 975 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 HOMER1Q86YM7 354 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 H3BQV1 296 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 IFFO2Q5TF58 517 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 DEF6Q9H4E7 631 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 TNIKQ9UKE5 1360 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 EZRP15311 586 aaKnown RBP6.66□□□□□ -1.34
XRN1-201ENST00000264951 AKAP17AQ02040 695 aaKnown RBP6.66□□□□□ -1.34
XRN1-201ENST00000264951 MORC1Q86VD1 984 aa6.66□□□□□ -1.34
XRN1-201ENST00000264951 CCAR2Q8N163 923 aaKnown RBP6.66□□□□□ -1.34
XRN1-201ENST00000264951 KIAA0754O94854 1291 aa6.65□□□□□ -1.34
XRN1-201ENST00000264951 ERLIN2O94905 339 aa6.65□□□□□ -1.34
XRN1-201ENST00000264951 MBD3O95983 291 aa6.65□□□□□ -1.34
XRN1-201ENST00000264951 ROCK1Q13464 1354 aa6.65□□□□□ -1.34
XRN1-201ENST00000264951 U2SURPO15042 1029 aaKnown RBP6.65□□□□□ -1.34
XRN1-201ENST00000264951 ZKSCAN1P17029 563 aaPredicted RBP6.65□□□□□ -1.34
XRN1-201ENST00000264951 GORABQ5T7V8 394 aa6.65□□□□□ -1.34
XRN1-201ENST00000264951 EIF3JO75822 258 aaKnown RBP6.65□□□□□ -1.34
XRN1-201ENST00000264951 CFDP1Q9UEE9 299 aaPredicted RBP6.65□□□□□ -1.35
XRN1-201ENST00000264951 IQCEQ6IPM2 695 aa6.65□□□□□ -1.35
XRN1-201ENST00000264951 CHMP5Q9NZZ3 219 aa6.65□□□□□ -1.35
XRN1-201ENST00000264951 NEUROD2Q15784 382 aa6.65□□□□□ -1.35
XRN1-201ENST00000264951 DYDC1Q8WWB3 177 aa6.65□□□□□ -1.35
XRN1-201ENST00000264951 ERLIN1O75477 346 aa6.65□□□□□ -1.35
XRN1-201ENST00000264951 SYNE3Q6ZMZ3 975 aa6.65□□□□□ -1.35
XRN1-201ENST00000264951 HDGFL2Q7Z4V5 671 aaPredicted RBP6.65□□□□□ -1.35
XRN1-201ENST00000264951 RRP9O43818 475 aaKnown RBP6.64□□□□□ -1.35
XRN1-201ENST00000264951 FAM184AQ8NB25 1140 aa6.64□□□□□ -1.35
XRN1-201ENST00000264951 GOLGA6L10A6NI86 522 aa6.64□□□□□ -1.35
XRN1-201ENST00000264951 MARCH6O60337 910 aa6.64□□□□□ -1.35
XRN1-201ENST00000264951 NLRP13Q86W25 1043 aa6.64□□□□□ -1.35
XRN1-201ENST00000264951 ITPRIPQ8IWB1 547 aa6.64□□□□□ -1.35
XRN1-201ENST00000264951 SMC4Q9NTJ3 1288 aa6.63□□□□□ -1.35
XRN1-201ENST00000264951 PKNOX2Q96KN3 472 aa6.63□□□□□ -1.35
XRN1-201ENST00000264951 TRIM29Q14134 588 aa6.63□□□□□ -1.35
XRN1-201ENST00000264951 CCNB3Q8WWL7 1395 aa6.63□□□□□ -1.35
XRN1-201ENST00000264951 HMGB1P1B2RPK0 211 aaPredicted RBP6.63□□□□□ -1.35
XRN1-201ENST00000264951 KIF2AO00139 706 aaPredicted RBP6.63□□□□□ -1.35
XRN1-201ENST00000264951 FAM13BQ9NYF5 915 aa6.63□□□□□ -1.35
XRN1-201ENST00000264951 POLR3GO15318 223 aaPredicted RBP6.63□□□□□ -1.35
XRN1-201ENST00000264951 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
XRN1-201ENST00000264951 CENPJQ9HC77 1338 aaPredicted RBP6.62□□□□□ -1.35
XRN1-201ENST00000264951 ARID3CA6NKF2 412 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 FEZ1Q99689 392 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 CCDC73Q6ZRK6 1079 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 PDCP20941 246 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 AMOTL1Q8IY63 956 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 KIF27Q86VH2 1401 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 MCM2P49736 904 aa6.62□□□□□ -1.35
XRN1-201ENST00000264951 MFAP1P55081 439 aaKnown RBP6.62□□□□□ -1.35
XRN1-201ENST00000264951 ODF2Q5BJF6 829 aa6.61□□□□□ -1.35
XRN1-201ENST00000264951 SMARCE1Q969G3 411 aa6.61□□□□□ -1.35
XRN1-201ENST00000264951 TRIM6-TRIM34B2RNG4 842 aa6.61□□□□□ -1.35
XRN1-201ENST00000264951 SASS6Q6UVJ0 657 aa6.61□□□□□ -1.35
XRN1-201ENST00000264951 CT47A1Q5JQC4 288 aaPredicted RBP6.61□□□□□ -1.35
XRN1-201ENST00000264951 ARID3AQ99856 593 aa6.61□□□□□ -1.35
XRN1-201ENST00000264951 RRP7BPQ9NSQ0 103 aa6.61□□□□□ -1.35
XRN1-201ENST00000264951 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
XRN1-201ENST00000264951 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
XRN1-201ENST00000264951 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
XRN1-201ENST00000264951 NF2P35240 595 aa6.6□□□□□ -1.35
XRN1-201ENST00000264951 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
XRN1-201ENST00000264951 TCEAL9Q9UHQ7 104 aa6.6□□□□□ -1.35
XRN1-201ENST00000264951 ZBTB7CA1YPR0 619 aa6.6□□□□□ -1.35
XRN1-201ENST00000264951 IFT57Q9NWB7 429 aa6.6□□□□□ -1.35
XRN1-201ENST00000264951 PATL2C9JE40 543 aaKnown RBP6.59□□□□□ -1.35
XRN1-201ENST00000264951 IL27Q8NEV9 243 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 CHMP7Q8WUX9 453 aaPredicted RBP6.59□□□□□ -1.35
XRN1-201ENST00000264951 NCBP3Q53F19 620 aaKnown RBP6.59□□□□□ -1.35
XRN1-201ENST00000264951 HSP90AB4PQ58FF6 505 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 OLFM4Q6UX06 510 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 MCM3P25205 808 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 SPATA24Q86W54 205 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 SPRYD3Q8NCJ5 442 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 TSHZ2Q9NRE2 1034 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 OFD1O75665 1012 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 TAF7LQ5H9L4 462 aa6.59□□□□□ -1.35
XRN1-201ENST00000264951 GOLGA6L10A0A0M3HER8 536 aa6.59□□□□□ -1.36
XRN1-201ENST00000264951 CPLX1O14810 134 aa6.59□□□□□ -1.36
XRN1-201ENST00000264951 CT47B1P0C2W7 299 aaPredicted RBP6.58□□□□□ -1.36
XRN1-201ENST00000264951 ZNF592Q92610 1267 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 SETD5Q9C0A6 1442 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 NASPP49321 788 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms