RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 ROCK1Q13464 1354 aa20.35■□□□□ 0.85
PDCD6-201ENST00000264933 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
PDCD6-201ENST00000264933 STRCQ7RTU9 1775 aa20.34■□□□□ 0.85
PDCD6-201ENST00000264933 RRP7BPQ9NSQ0 103 aa20.34■□□□□ 0.85
PDCD6-201ENST00000264933 CNTLNQ9NXG0 1405 aa20.34■□□□□ 0.85
PDCD6-201ENST00000264933 DUOX2Q9NRD8 1548 aa20.33■□□□□ 0.85
PDCD6-201ENST00000264933 KIF15Q9NS87 1388 aa20.33■□□□□ 0.84
PDCD6-201ENST00000264933 SETD1BQ9UPS6 1966 aaKnown RBP20.32■□□□□ 0.84
PDCD6-201ENST00000264933 EIF2AK4Q9P2K8 1649 aaKnown RBP20.29■□□□□ 0.84
PDCD6-201ENST00000264933 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
PDCD6-201ENST00000264933 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
PDCD6-201ENST00000264933 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
PDCD6-201ENST00000264933 ZMYM3Q14202 1370 aa20.27■□□□□ 0.84
PDCD6-201ENST00000264933 ESF1Q9H501 851 aaKnown RBP20.27■□□□□ 0.84
PDCD6-201ENST00000264933 NPATQ14207 1427 aa20.27■□□□□ 0.83
PDCD6-201ENST00000264933 CERKQ8TCT0 537 aa20.26■□□□□ 0.83
PDCD6-201ENST00000264933 NAIPQ13075 1403 aa20.26■□□□□ 0.83
PDCD6-201ENST00000264933 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
PDCD6-201ENST00000264933 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
PDCD6-201ENST00000264933 RNF17Q9BXT8 1623 aaKnown RBP20.24■□□□□ 0.83
PDCD6-201ENST00000264933 CLTCQ00610 1675 aaKnown RBP20.23■□□□□ 0.83
PDCD6-201ENST00000264933 HFM1A2PYH4 1435 aa20.23■□□□□ 0.83
PDCD6-201ENST00000264933 KIF3BO15066 747 aa20.23■□□□□ 0.83
PDCD6-201ENST00000264933 ANKRD50Q9ULJ7 1429 aa20.23■□□□□ 0.83
PDCD6-201ENST00000264933 DEPDC5O75140 1603 aa20.23■□□□□ 0.83
PDCD6-201ENST00000264933 PTPRTO14522 1441 aa20.21■□□□□ 0.83
PDCD6-201ENST00000264933 TRIM26Q12899 539 aaPredicted RBP20.21■□□□□ 0.83
PDCD6-201ENST00000264933 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
PDCD6-201ENST00000264933 GGT6Q6P531 493 aa20.19■□□□□ 0.82
PDCD6-201ENST00000264933 UNC13BO14795 1591 aa20.17■□□□□ 0.82
PDCD6-201ENST00000264933 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
PDCD6-201ENST00000264933 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
PDCD6-201ENST00000264933 VWDEQ8N2E2 1590 aa20.16■□□□□ 0.82
PDCD6-201ENST00000264933 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
PDCD6-201ENST00000264933 PPP6R1Q9UPN7 881 aa20.15■□□□□ 0.82
PDCD6-201ENST00000264933 ZNF142P52746 1687 aaPredicted RBP20.15■□□□□ 0.82
PDCD6-201ENST00000264933 CEP152O94986 1710 aa20.14■□□□□ 0.81
PDCD6-201ENST00000264933 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
PDCD6-201ENST00000264933 KDM5DQ9BY66 1539 aa20.14■□□□□ 0.81
PDCD6-201ENST00000264933 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
PDCD6-201ENST00000264933 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
PDCD6-201ENST00000264933 ABCC3O15438 1527 aa20.1■□□□□ 0.81
PDCD6-201ENST00000264933 FAM135AQ9P2D6 1515 aa20.1■□□□□ 0.81
PDCD6-201ENST00000264933 PLA2R1Q13018 1463 aa20.1■□□□□ 0.81
PDCD6-201ENST00000264933 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
PDCD6-201ENST00000264933 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.81
PDCD6-201ENST00000264933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.819e-7■■■■□ 21.2
PDCD6-201ENST00000264933 IQGAP3Q86VI3 1631 aa20.08■□□□□ 0.8
PDCD6-201ENST00000264933 LMTK2Q8IWU2 1503 aa20.07■□□□□ 0.8
PDCD6-201ENST00000264933 RAB3GAP2Q9H2M9 1393 aa20.07■□□□□ 0.8
PDCD6-201ENST00000264933 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
PDCD6-201ENST00000264933 PZPP20742 1482 aa20.05■□□□□ 0.8
PDCD6-201ENST00000264933 WASHC2CQ9Y4E1 1318 aa20.05■□□□□ 0.8
PDCD6-201ENST00000264933 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
PDCD6-201ENST00000264933 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
PDCD6-201ENST00000264933 NUP155O75694 1391 aa20.04■□□□□ 0.8
PDCD6-201ENST00000264933 HRCP23327 699 aa20.03■□□□□ 0.8
PDCD6-201ENST00000264933 TET3O43151 1660 aa20.03■□□□□ 0.8
PDCD6-201ENST00000264933 KANK1Q14678 1352 aa20.02■□□□□ 0.8
PDCD6-201ENST00000264933 TNRQ92752 1358 aa20.01■□□□□ 0.79
PDCD6-201ENST00000264933 ZNF335Q9H4Z2 1342 aaPredicted RBP20.01■□□□□ 0.79
PDCD6-201ENST00000264933 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
PDCD6-201ENST00000264933 PKD2Q13563 968 aa20■□□□□ 0.79
PDCD6-201ENST00000264933 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
PDCD6-201ENST00000264933 E9PCH4 1651 aa20■□□□□ 0.79
PDCD6-201ENST00000264933 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
PDCD6-201ENST00000264933 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
PDCD6-201ENST00000264933 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
PDCD6-201ENST00000264933 NEURL4Q96JN8 1562 aa19.96■□□□□ 0.79
PDCD6-201ENST00000264933 SPATA31D1Q6ZQQ2 1576 aa19.93■□□□□ 0.78
PDCD6-201ENST00000264933 ACIN1Q9UKV3 1341 aaKnown RBP19.93■□□□□ 0.78
PDCD6-201ENST00000264933 NLRP1Q9C000 1473 aa19.92■□□□□ 0.78
PDCD6-201ENST00000264933 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
PDCD6-201ENST00000264933 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
PDCD6-201ENST00000264933 RPRD2Q5VT52 1461 aaKnown RBP19.91■□□□□ 0.78
PDCD6-201ENST00000264933 NOS1P29475 1434 aa19.9■□□□□ 0.78
PDCD6-201ENST00000264933 POLR1AO95602 1720 aaPredicted RBP19.9■□□□□ 0.78
PDCD6-201ENST00000264933 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.77
PDCD6-201ENST00000264933 SYNMO15061 1565 aa19.88■□□□□ 0.77
PDCD6-201ENST00000264933 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
PDCD6-201ENST00000264933 SPHKAPQ2M3C7 1700 aa19.87■□□□□ 0.77
PDCD6-201ENST00000264933 MED14O60244 1454 aa19.86■□□□□ 0.77
PDCD6-201ENST00000264933 FOXD1Q16676 465 aa19.84■□□□□ 0.77
PDCD6-201ENST00000264933 THEMISQ8N1K5 641 aaPredicted RBP19.84■□□□□ 0.77
PDCD6-201ENST00000264933 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
PDCD6-201ENST00000264933 ANKLE2Q86XL3 938 aa19.82■□□□□ 0.76
PDCD6-201ENST00000264933 NPHP4O75161 1426 aaPredicted RBP19.81■□□□□ 0.76
PDCD6-201ENST00000264933 CPS1P31327 1500 aa19.8■□□□□ 0.76
PDCD6-201ENST00000264933 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
PDCD6-201ENST00000264933 TRPM2O94759 1503 aa19.78■□□□□ 0.76
PDCD6-201ENST00000264933 IDI1Q13907 227 aa19.78■□□□□ 0.76
PDCD6-201ENST00000264933 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
PDCD6-201ENST00000264933 MYO5BQ9ULV0 1848 aa19.78■□□□□ 0.76
PDCD6-201ENST00000264933 CLTCL1P53675 1640 aa19.77■□□□□ 0.76
PDCD6-201ENST00000264933 UBR1Q8IWV7 1749 aa19.77■□□□□ 0.76
PDCD6-201ENST00000264933 DISP3Q9P2K9 1392 aa19.77■□□□□ 0.76
PDCD6-201ENST00000264933 IQGAP1P46940 1657 aa19.77■□□□□ 0.76
PDCD6-201ENST00000264933 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
PDCD6-201ENST00000264933 ILDR2Q71H61 639 aa19.75■□□□□ 0.75
PDCD6-201ENST00000264933 SLC52A1Q9NWF4 448 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms