RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 PTPN23Q9H3S7 1636 aa31.57■■■□□ 2.64
CKLF-201ENST00000264001 PTPRKQ15262 1439 aa31.57■■■□□ 2.64
CKLF-201ENST00000264001 CEP170BQ9Y4F5 1589 aaPredicted RBP31.56■■■□□ 2.64
CKLF-201ENST00000264001 FAM135AQ9P2D6 1515 aa31.53■■■□□ 2.64
CKLF-201ENST00000264001 FGD6Q6ZV73 1430 aa31.51■■■□□ 2.64
CKLF-201ENST00000264001 KDM5DQ9BY66 1539 aa31.51■■■□□ 2.63
CKLF-201ENST00000264001 CROCC2H7BZ55 1655 aa31.49■■■□□ 2.63
CKLF-201ENST00000264001 ABCC5O15440 1437 aa31.48■■■□□ 2.63
CKLF-201ENST00000264001 WASHC2CQ9Y4E1 1318 aa31.47■■■□□ 2.63
CKLF-201ENST00000264001 PLA2R1Q13018 1463 aa31.46■■■□□ 2.63
CKLF-201ENST00000264001 TCOF1Q13428 1488 aaKnown RBP31.46■■■□□ 2.63
CKLF-201ENST00000264001 RNF17Q9BXT8 1623 aaKnown RBP31.46■■■□□ 2.63
CKLF-201ENST00000264001 SHANK2Q9UPX8 1470 aa31.46■■■□□ 2.63
CKLF-201ENST00000264001 EIF2AK4Q9P2K8 1649 aaKnown RBP31.46■■■□□ 2.63
CKLF-201ENST00000264001 LTBP4Q8N2S1 1624 aa31.44■■■□□ 2.62
CKLF-201ENST00000264001 DNMT1P26358 1616 aaKnown RBP31.43■■■□□ 2.62
CKLF-201ENST00000264001 DUOX2Q9NRD8 1548 aa31.43■■■□□ 2.62
CKLF-201ENST00000264001 DAPK1P53355 1430 aa31.42■■■□□ 2.62
CKLF-201ENST00000264001 PZPP20742 1482 aa31.42■■■□□ 2.62
CKLF-201ENST00000264001 FBXO31Q5XUX0 539 aaPredicted RBP31.39■■■□□ 2.62
CKLF-201ENST00000264001 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
CKLF-201ENST00000264001 IQSEC2Q5JU85 1478 aa31.39■■■□□ 2.62
CKLF-201ENST00000264001 POLR1AO95602 1720 aaPredicted RBP31.38■■■□□ 2.61
CKLF-201ENST00000264001 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
CKLF-201ENST00000264001 ZC3H13Q5T200 1668 aaKnown RBP31.36■■■□□ 2.61
CKLF-201ENST00000264001 MROH1Q8NDA8 1641 aa31.36■■■□□ 2.61
CKLF-201ENST00000264001 ABCC3O15438 1527 aa31.35■■■□□ 2.61
CKLF-201ENST00000264001 TNRQ92752 1358 aa31.35■■■□□ 2.61
CKLF-201ENST00000264001 RRP7BPQ9NSQ0 103 aa31.35■■■□□ 2.61
CKLF-201ENST00000264001 ERBINQ96RT1 1412 aa31.31■■■□□ 2.6
CKLF-201ENST00000264001 NCKAP5LQ9HCH0 1330 aa31.3■■■□□ 2.6
CKLF-201ENST00000264001 CEP152O94986 1710 aa31.3■■■□□ 2.6
CKLF-201ENST00000264001 PKD2Q13563 968 aa31.3■■■□□ 2.6
CKLF-201ENST00000264001 CHIC2Q9UKJ5 165 aa31.3■■■□□ 2.6
CKLF-201ENST00000264001 FAM50AQ14320 339 aaKnown RBP31.27■■■□□ 2.6
CKLF-201ENST00000264001 ANKRD30AQ9BXX3 1397 aa31.27■■■□□ 2.6
CKLF-201ENST00000264001 CFAP65Q6ZU64 1925 aaKnown RBP31.25■■■□□ 2.59
CKLF-201ENST00000264001 PRDM15P57071 1507 aaPredicted RBP31.24■■■□□ 2.59
CKLF-201ENST00000264001 SPATA31D1Q6ZQQ2 1576 aa31.22■■■□□ 2.59
CKLF-201ENST00000264001 NEURL4Q96JN8 1562 aa31.22■■■□□ 2.59
CKLF-201ENST00000264001 NLRP1Q9C000 1473 aa31.21■■■□□ 2.59
CKLF-201ENST00000264001 DEPDC5O75140 1603 aa31.21■■■□□ 2.59
CKLF-201ENST00000264001 ADGRL2O95490 1459 aa31.2■■■□□ 2.58
CKLF-201ENST00000264001 ERVK-7P63135 1459 aa31.2■■■□□ 2.58
CKLF-201ENST00000264001 ZNF335Q9H4Z2 1342 aaPredicted RBP31.19■■■□□ 2.58
CKLF-201ENST00000264001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.18■■■□□ 2.58
CKLF-201ENST00000264001 UGGT1Q9NYU2 1555 aa31.15■■■□□ 2.58
CKLF-201ENST00000264001 THEMISQ8N1K5 641 aaPredicted RBP31.13■■■□□ 2.57
CKLF-201ENST00000264001 KANK1Q14678 1352 aa31.13■■■□□ 2.57
CKLF-201ENST00000264001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.12■■■□□ 2.57
CKLF-201ENST00000264001 ARHGAP31Q2M1Z3 1444 aa31.12■■■□□ 2.57
CKLF-201ENST00000264001 PPARGC1BQ86YN6 1023 aaKnown RBP31.11■■■□□ 2.57
CKLF-201ENST00000264001 VWDEQ8N2E2 1590 aa31.08■■■□□ 2.57
CKLF-201ENST00000264001 ANKLE2Q86XL3 938 aa31.06■■■□□ 2.56
CKLF-201ENST00000264001 CPS1P31327 1500 aa31.06■■■□□ 2.56
CKLF-201ENST00000264001 IQGAP1P46940 1657 aa31.06■■■□□ 2.56
CKLF-201ENST00000264001 ANKRD50Q9ULJ7 1429 aa31.06■■■□□ 2.56
CKLF-201ENST00000264001 LMTK2Q8IWU2 1503 aa31.05■■■□□ 2.56
CKLF-201ENST00000264001 UBR1Q8IWV7 1749 aa31.03■■■□□ 2.56
CKLF-201ENST00000264001 MED14O60244 1454 aa31.01■■■□□ 2.56
CKLF-201ENST00000264001 DISP3Q9P2K9 1392 aa30.98■■■□□ 2.55
CKLF-201ENST00000264001 NPHP4O75161 1426 aaPredicted RBP30.98■■■□□ 2.55
CKLF-201ENST00000264001 ROCK1Q13464 1354 aa30.96■■■□□ 2.55
CKLF-201ENST00000264001 UBAP1LF5GYI3 381 aa30.96■■■□□ 2.55
CKLF-201ENST00000264001 EFCAB6Q5THR3 1501 aa30.96■■■□□ 2.55
CKLF-201ENST00000264001 ITGAEP38570 1179 aa30.93■■■□□ 2.54
CKLF-201ENST00000264001 PIK3C2BO00750 1634 aa30.93■■■□□ 2.54
CKLF-201ENST00000264001 SYNMO15061 1565 aa30.91■■■□□ 2.54
CKLF-201ENST00000264001 UNC13BO14795 1591 aa30.9■■■□□ 2.54
CKLF-201ENST00000264001 NOS1P29475 1434 aa30.89■■■□□ 2.53
CKLF-201ENST00000264001 ARHGAP23Q9P227 1491 aa30.88■■■□□ 2.53
CKLF-201ENST00000264001 SLIT1O75093 1534 aa30.88■■■□□ 2.53
CKLF-201ENST00000264001 TET3O43151 1660 aa30.87■■■□□ 2.53
CKLF-201ENST00000264001 STRCP1A6NGW2 1772 aa30.87■■■□□ 2.53
CKLF-201ENST00000264001 IDI1Q13907 227 aa30.86■■■□□ 2.53
CKLF-201ENST00000264001 SCAF11Q99590 1463 aaKnown RBP30.86■■■□□ 2.53
CKLF-201ENST00000264001 KDM5AP29375 1690 aaKnown RBP30.85■■■□□ 2.53
CKLF-201ENST00000264001 STAG3Q9UJ98 1225 aa30.85■■■□□ 2.53
CKLF-201ENST00000264001 RPRD2Q5VT52 1461 aaKnown RBP30.84■■■□□ 2.53
CKLF-201ENST00000264001 GCC2Q8IWJ2 1684 aa30.84■■■□□ 2.53
CKLF-201ENST00000264001 LTKP29376 864 aa30.83■■■□□ 2.53
CKLF-201ENST00000264001 TXNDC2Q86VQ3 553 aa30.82■■■□□ 2.52
CKLF-201ENST00000264001 RRBP1Q9P2E9 1410 aaKnown RBP30.81■■■□□ 2.52
CKLF-201ENST00000264001 TMEM2Q9UHN6 1383 aa30.79■■■□□ 2.52
CKLF-201ENST00000264001 EID1Q9Y6B2 187 aa30.79■■■□□ 2.52
CKLF-201ENST00000264001 IQGAP3Q86VI3 1631 aa30.78■■■□□ 2.52
CKLF-201ENST00000264001 SLC52A1Q9NWF4 448 aa30.78■■■□□ 2.52
CKLF-201ENST00000264001 ADGRB3O60242 1522 aa30.76■■■□□ 2.51
CKLF-201ENST00000264001 E9PCH4 1651 aa30.75■■■□□ 2.51
CKLF-201ENST00000264001 TOM1O60784 492 aa30.75■■■□□ 2.51
CKLF-201ENST00000264001 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
CKLF-201ENST00000264001 ALKQ9UM73 1620 aa30.73■■■□□ 2.51
CKLF-201ENST00000264001 NUP155O75694 1391 aa30.73■■■□□ 2.51
CKLF-201ENST00000264001 LRRC7Q96NW7 1537 aa30.73■■■□□ 2.51
CKLF-201ENST00000264001 ILDR2Q71H61 639 aa30.72■■■□□ 2.51
CKLF-201ENST00000264001 MYO5BQ9ULV0 1848 aa30.7■■■□□ 2.5
CKLF-201ENST00000264001 PIP4K2BP78356 416 aa30.69■■■□□ 2.5
CKLF-201ENST00000264001 XIRP1Q702N8 1843 aaKnown RBP30.66■■■□□ 2.5
CKLF-201ENST00000264001 MED1Q15648 1581 aaPredicted RBP30.64■■■□□ 2.5
CKLF-201ENST00000264001 TMEM131LA2VDJ0 1609 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms