RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ARHGEF11O15085 1522 aa10.87□□□□□ -0.67
LDB3-201ENST00000263066 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
LDB3-201ENST00000263066 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
LDB3-201ENST00000263066 WASHC2AQ641Q2 1341 aa10.86□□□□□ -0.67
LDB3-201ENST00000263066 KIAA0586Q9BVV6 1533 aa10.86□□□□□ -0.67
LDB3-201ENST00000263066 DISP1Q96F81 1524 aa10.85□□□□□ -0.67
LDB3-201ENST00000263066 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
LDB3-201ENST00000263066 A0A0G2JS52 829 aa10.84□□□□□ -0.67
LDB3-201ENST00000263066 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
LDB3-201ENST00000263066 CEBPAP49715 358 aaPredicted RBP10.84□□□□□ -0.67
LDB3-201ENST00000263066 MPHOSPH9Q99550 1183 aa10.84□□□□□ -0.67
LDB3-201ENST00000263066 FRAT2O75474 233 aaPredicted RBP10.83□□□□□ -0.68
LDB3-201ENST00000263066 RAB3GAP2Q9H2M9 1393 aa10.83□□□□□ -0.68
LDB3-201ENST00000263066 PDE4AP27815 886 aa10.83□□□□□ -0.68
LDB3-201ENST00000263066 MAGI1Q96QZ7 1491 aaPredicted RBP10.82□□□□□ -0.68
LDB3-201ENST00000263066 SCAPERQ9BY12 1400 aa10.82□□□□□ -0.68
LDB3-201ENST00000263066 DENND4BO75064 1496 aaPredicted RBP10.82□□□□□ -0.68
LDB3-201ENST00000263066 PRDM10Q9NQV6 1147 aa10.81□□□□□ -0.68
LDB3-201ENST00000263066 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
LDB3-201ENST00000263066 GOLGA6L3A6NEY3 463 aa10.81□□□□□ -0.68
LDB3-201ENST00000263066 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
LDB3-201ENST00000263066 KDM6BO15054 1643 aa10.8□□□□□ -0.68
LDB3-201ENST00000263066 MAP3K1Q13233 1512 aa10.8□□□□□ -0.68
LDB3-201ENST00000263066 SLKQ9H2G2 1235 aaPredicted RBP10.8□□□□□ -0.68
LDB3-201ENST00000263066 CHD1O14646 1710 aa10.79□□□□□ -0.68
LDB3-201ENST00000263066 RRAGDQ9NQL2 400 aaPredicted RBP10.79□□□□□ -0.68
LDB3-201ENST00000263066 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
LDB3-201ENST00000263066 CARD11Q9BXL7 1154 aa10.79□□□□□ -0.68
LDB3-201ENST00000263066 IQGAP2Q13576 1575 aa10.78□□□□□ -0.68
LDB3-201ENST00000263066 ANKRD30AQ9BXX3 1397 aa10.78□□□□□ -0.68
LDB3-201ENST00000263066 POGKQ9P215 609 aa10.78□□□□□ -0.68
LDB3-201ENST00000263066 TCERG1O14776 1098 aaKnown RBP10.78□□□□□ -0.68
LDB3-201ENST00000263066 PDCL3Q9H2J4 239 aa10.78□□□□□ -0.68
LDB3-201ENST00000263066 RBM33Q96EV2 1170 aaKnown RBP10.77□□□□□ -0.68
LDB3-201ENST00000263066 MYH16Q9H6N6 1097 aa10.77□□□□□ -0.68
LDB3-201ENST00000263066 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.69
LDB3-201ENST00000263066 PTPRKQ15262 1439 aa10.77□□□□□ -0.69
LDB3-201ENST00000263066 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
LDB3-201ENST00000263066 VGLL3A8MV65 326 aa10.76□□□□□ -0.69
LDB3-201ENST00000263066 MAPKBP1O60336 1514 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 KIAA0556O60303 1618 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 NCOA2Q15596 1464 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 UGGT2Q9NYU1 1516 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 MSNP26038 577 aaKnown RBP10.75□□□□□ -0.69
LDB3-201ENST00000263066 KANK1Q14678 1352 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 SETD5Q9C0A6 1442 aa10.75□□□□□ -0.69
LDB3-201ENST00000263066 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
LDB3-201ENST00000263066 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
LDB3-201ENST00000263066 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
LDB3-201ENST00000263066 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
LDB3-201ENST00000263066 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
LDB3-201ENST00000263066 DHX37Q8IY37 1157 aaKnown RBP10.73□□□□□ -0.69
LDB3-201ENST00000263066 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
LDB3-201ENST00000263066 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
LDB3-201ENST00000263066 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
LDB3-201ENST00000263066 KIF15Q9NS87 1388 aa10.72□□□□□ -0.69
LDB3-201ENST00000263066 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
LDB3-201ENST00000263066 TPM2P07951 284 aa10.72□□□□□ -0.69
LDB3-201ENST00000263066 CALD1Q05682 793 aaKnown RBP10.72□□□□□ -0.69
LDB3-201ENST00000263066 BECN1Q14457 450 aa10.72□□□□□ -0.69
LDB3-201ENST00000263066 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.69
LDB3-201ENST00000263066 FBXO31Q5XUX0 539 aaPredicted RBP10.71□□□□□ -0.69
LDB3-201ENST00000263066 FGD6Q6ZV73 1430 aa10.71□□□□□ -0.7
LDB3-201ENST00000263066 KIAA1211Q6ZU35 1233 aa10.7□□□□□ -0.7
LDB3-201ENST00000263066 E9PSI1 815 aa10.7□□□□□ -0.7
LDB3-201ENST00000263066 TMEM132EQ6IEE7 984 aa10.7□□□□□ -0.7
LDB3-201ENST00000263066 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
LDB3-201ENST00000263066 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
LDB3-201ENST00000263066 TROQ12816 1431 aaPredicted RBP10.69□□□□□ -0.7
LDB3-201ENST00000263066 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
LDB3-201ENST00000263066 MYOM3Q5VTT5 1437 aa10.69□□□□□ -0.7
LDB3-201ENST00000263066 FYCO1Q9BQS8 1478 aa10.69□□□□□ -0.7
LDB3-201ENST00000263066 SLC26A8Q96RN1 970 aa10.68□□□□□ -0.7
LDB3-201ENST00000263066 DNAJC5Q9H3Z4 198 aa10.68□□□□□ -0.7
LDB3-201ENST00000263066 ASXL2Q76L83 1435 aa10.68□□□□□ -0.7
LDB3-201ENST00000263066 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
LDB3-201ENST00000263066 NUP160Q12769 1436 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 APPP05067 770 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 KIF14Q15058 1648 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 ATP10BO94823 1461 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 ESPNB1AK53 854 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 RSPH4AQ5TD94 716 aa10.67□□□□□ -0.7
LDB3-201ENST00000263066 R3HCC1Q9Y3T6 440 aaKnown RBP10.67□□□□□ -0.7
LDB3-201ENST00000263066 UPF2Q9HAU5 1272 aaKnown RBP10.66□□□□□ -0.7
LDB3-201ENST00000263066 CLCN1P35523 988 aa10.66□□□□□ -0.7
LDB3-201ENST00000263066 NUP153P49790 1475 aaKnown RBP10.66□□□□□ -0.7
LDB3-201ENST00000263066 CC2D1BQ5T0F9 858 aaKnown RBP10.65□□□□□ -0.7
LDB3-201ENST00000263066 MAP7D2Q96T17 732 aa10.65□□□□□ -0.7
LDB3-201ENST00000263066 HSPA2P54652 639 aa10.65□□□□□ -0.7
LDB3-201ENST00000263066 ADCY10Q96PN6 1610 aa10.65□□□□□ -0.71
LDB3-201ENST00000263066 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
LDB3-201ENST00000263066 BACH2Q9BYV9 841 aa10.63□□□□□ -0.71
LDB3-201ENST00000263066 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
LDB3-201ENST00000263066 ABCA8O94911 1581 aa10.63□□□□□ -0.71
LDB3-201ENST00000263066 TNNT3P45378 269 aaPredicted RBP10.63□□□□□ -0.71
LDB3-201ENST00000263066 ANKRD50Q9ULJ7 1429 aa10.62□□□□□ -0.71
LDB3-201ENST00000263066 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
LDB3-201ENST00000263066 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms