RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
SHANK3-201ENST00000262795 DHX16O60231 1041 aaKnown RBP19.95■□□□□ 0.78
SHANK3-201ENST00000262795 STRN4Q9NRL3 753 aa19.95■□□□□ 0.78
SHANK3-201ENST00000262795 NUP155O75694 1391 aa19.94■□□□□ 0.78
SHANK3-201ENST00000262795 SOGA1O94964 1423 aa19.94■□□□□ 0.78
SHANK3-201ENST00000262795 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
SHANK3-201ENST00000262795 FYB1O15117 783 aa19.94■□□□□ 0.78
SHANK3-201ENST00000262795 RBM33Q96EV2 1170 aaKnown RBP19.93■□□□□ 0.78
SHANK3-201ENST00000262795 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
SHANK3-201ENST00000262795 MINK1Q8N4C8 1332 aaPredicted RBP19.93■□□□□ 0.78
SHANK3-201ENST00000262795 HSCBQ8IWL3 235 aa19.92■□□□□ 0.78
SHANK3-201ENST00000262795 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
SHANK3-201ENST00000262795 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
SHANK3-201ENST00000262795 CCAR1Q8IX12 1150 aaKnown RBP19.91■□□□□ 0.78
SHANK3-201ENST00000262795 MTMR7Q9Y216 660 aa19.91■□□□□ 0.78
SHANK3-201ENST00000262795 CHAF1AQ13111 956 aaPredicted RBP19.9■□□□□ 0.78
SHANK3-201ENST00000262795 PES1O00541 588 aaKnown RBP19.9■□□□□ 0.78
SHANK3-201ENST00000262795 NRDCO43847 1150 aa19.9■□□□□ 0.78
SHANK3-201ENST00000262795 RRP7AQ9Y3A4 280 aaKnown RBP19.88■□□□□ 0.77
SHANK3-201ENST00000262795 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
SHANK3-201ENST00000262795 CALD1Q05682 793 aaKnown RBP19.86■□□□□ 0.77
SHANK3-201ENST00000262795 PAXIP1Q6ZW49 1069 aaPredicted RBP19.86■□□□□ 0.77
SHANK3-201ENST00000262795 SMC4Q9NTJ3 1288 aa19.86■□□□□ 0.77
SHANK3-201ENST00000262795 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
SHANK3-201ENST00000262795 AMOTL1Q8IY63 956 aa19.86■□□□□ 0.77
SHANK3-201ENST00000262795 TEFQ10587 303 aa19.86■□□□□ 0.77
SHANK3-201ENST00000262795 CLUAP1Q96AJ1 413 aa19.86■□□□□ 0.77
SHANK3-201ENST00000262795 PLIN1O60240 522 aa19.85■□□□□ 0.77
SHANK3-201ENST00000262795 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
SHANK3-201ENST00000262795 EEA1Q15075 1411 aa19.85■□□□□ 0.77
SHANK3-201ENST00000262795 IBSPP21815 317 aaPredicted RBP19.84■□□□□ 0.77
SHANK3-201ENST00000262795 FOXD4L5Q5VV16 416 aaPredicted RBP19.84■□□□□ 0.77
SHANK3-201ENST00000262795 FOXD4L4Q8WXT5 416 aaPredicted RBP19.84■□□□□ 0.77
SHANK3-201ENST00000262795 COG3Q96JB2 828 aa19.84■□□□□ 0.77
SHANK3-201ENST00000262795 APPP05067 770 aa19.83■□□□□ 0.77
SHANK3-201ENST00000262795 NACADO15069 1562 aa19.83■□□□□ 0.76
SHANK3-201ENST00000262795 A0A0U1RQG5 324 aaPredicted RBP19.83■□□□□ 0.76
SHANK3-201ENST00000262795 JPH4Q96JJ6 628 aa19.83■□□□□ 0.76
SHANK3-201ENST00000262795 CEP89Q96ST8 783 aa19.82■□□□□ 0.76
SHANK3-201ENST00000262795 NLRP2Q9NX02 1062 aa19.81■□□□□ 0.76
SHANK3-201ENST00000262795 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
SHANK3-201ENST00000262795 KTN1Q86UP2 1357 aaKnown RBP19.79■□□□□ 0.76
SHANK3-201ENST00000262795 CCDC27Q2M243 656 aa19.79■□□□□ 0.76
SHANK3-201ENST00000262795 HSPA5P11021 654 aaKnown RBP19.79■□□□□ 0.76
SHANK3-201ENST00000262795 CFAP44Q96MT7 982 aa19.78■□□□□ 0.76
SHANK3-201ENST00000262795 RILPL2Q969X0 211 aa19.78■□□□□ 0.76
SHANK3-201ENST00000262795 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
SHANK3-201ENST00000262795 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
SHANK3-201ENST00000262795 AIMP1Q12904 312 aaKnown RBP19.77■□□□□ 0.76
SHANK3-201ENST00000262795 KDM4AO75164 1064 aa19.77■□□□□ 0.76
SHANK3-201ENST00000262795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.77■□□□□ 0.76
SHANK3-201ENST00000262795 EIF3AQ14152 1382 aaKnown RBP19.77■□□□□ 0.76
SHANK3-201ENST00000262795 IKQ13123 557 aaPredicted RBP19.77■□□□□ 0.76
SHANK3-201ENST00000262795 AKAP17AQ02040 695 aaKnown RBP19.76■□□□□ 0.75
SHANK3-201ENST00000262795 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
SHANK3-201ENST00000262795 TNNT3P45378 269 aaPredicted RBP19.76■□□□□ 0.75
SHANK3-201ENST00000262795 ESCO1Q5FWF5 840 aa19.76■□□□□ 0.75
SHANK3-201ENST00000262795 ARHGAP35Q9NRY4 1499 aa19.76■□□□□ 0.75
SHANK3-201ENST00000262795 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
SHANK3-201ENST00000262795 CCDC43Q96MW1 224 aaKnown RBP19.74■□□□□ 0.75
SHANK3-201ENST00000262795 PROSER2Q86WR7 435 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-201ENST00000262795 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
SHANK3-201ENST00000262795 C9orf78Q9NZ63 289 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-201ENST00000262795 MFAP1P55081 439 aaKnown RBP19.72■□□□□ 0.75
SHANK3-201ENST00000262795 TSHZ2Q9NRE2 1034 aa19.72■□□□□ 0.75
SHANK3-201ENST00000262795 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
SHANK3-201ENST00000262795 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
SHANK3-201ENST00000262795 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
SHANK3-201ENST00000262795 TMEM132AQ24JP5 1023 aa19.7■□□□□ 0.74
SHANK3-201ENST00000262795 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
SHANK3-201ENST00000262795 NEXNQ0ZGT2 675 aa19.7■□□□□ 0.74
SHANK3-201ENST00000262795 TPD52L1Q16890 204 aaPredicted RBP19.7■□□□□ 0.74
SHANK3-201ENST00000262795 FOSBP53539 338 aa19.69■□□□□ 0.74
SHANK3-201ENST00000262795 BCL2L13Q9BXK5 485 aa19.69■□□□□ 0.74
SHANK3-201ENST00000262795 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
SHANK3-201ENST00000262795 SF3A1Q15459 793 aaKnown RBP19.68■□□□□ 0.74
SHANK3-201ENST00000262795 HMMRO75330 724 aa19.67■□□□□ 0.74
SHANK3-201ENST00000262795 MYCNP04198 464 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-201ENST00000262795 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
SHANK3-201ENST00000262795 RBM5P52756 815 aaKnown RBP eCLIP19.66■□□□□ 0.748e-6■■■■□ 20.7
SHANK3-201ENST00000262795 CHMP4AQ9BY43 222 aa19.66■□□□□ 0.74
SHANK3-201ENST00000262795 SYNE3Q6ZMZ3 975 aa19.65■□□□□ 0.74
SHANK3-201ENST00000262795 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
SHANK3-201ENST00000262795 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
SHANK3-201ENST00000262795 H3BQV1 296 aa19.64■□□□□ 0.73
SHANK3-201ENST00000262795 GRM1Q13255 1194 aa19.64■□□□□ 0.73
SHANK3-201ENST00000262795 IFFO2Q5TF58 517 aa19.64■□□□□ 0.73
SHANK3-201ENST00000262795 HDAC5Q9UQL6 1122 aa19.64■□□□□ 0.73
SHANK3-201ENST00000262795 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
SHANK3-201ENST00000262795 TPM4P67936 248 aa19.63■□□□□ 0.73
SHANK3-201ENST00000262795 ATP2B2Q01814 1243 aa19.63■□□□□ 0.73
SHANK3-201ENST00000262795 PMFBP1Q8TBY8 1022 aa19.63■□□□□ 0.73
SHANK3-201ENST00000262795 MSNP26038 577 aaKnown RBP19.63■□□□□ 0.73
SHANK3-201ENST00000262795 STK11IPQ8N1F8 1099 aa19.63■□□□□ 0.73
SHANK3-201ENST00000262795 XPCQ01831 940 aaPredicted RBP19.62■□□□□ 0.73
SHANK3-201ENST00000262795 PAF1Q8N7H5 531 aa19.62■□□□□ 0.73
SHANK3-201ENST00000262795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHANK3-201ENST00000262795 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
SHANK3-201ENST00000262795 CHMP4BP1P59074 171 aa19.61■□□□□ 0.73
SHANK3-201ENST00000262795 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms