RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
TRAF4-201ENST00000262395 NBPF1Q3BBV0 1214 aa23.93■■□□□ 1.42
TRAF4-201ENST00000262395 UHRF1BP1Q6BDS2 1440 aa23.93■■□□□ 1.42
TRAF4-201ENST00000262395 ADGRL2O95490 1459 aa23.92■■□□□ 1.42
TRAF4-201ENST00000262395 PDE4AP27815 886 aa23.92■■□□□ 1.42
TRAF4-201ENST00000262395 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
TRAF4-201ENST00000262395 PLEKHD1A6NEE1 506 aa23.91■■□□□ 1.42
TRAF4-201ENST00000262395 ANO8Q9HCE9 1232 aaPredicted RBP23.91■■□□□ 1.42
TRAF4-201ENST00000262395 C9orf84Q5VXU9 1444 aa23.9■■□□□ 1.42
TRAF4-201ENST00000262395 ITSN2Q9NZM3 1697 aa23.9■■□□□ 1.42
TRAF4-201ENST00000262395 NLRP13Q86W25 1043 aa23.89■■□□□ 1.42
TRAF4-201ENST00000262395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.87■■□□□ 1.419e-7■■■□□ 14.9
TRAF4-201ENST00000262395 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
TRAF4-201ENST00000262395 TCERG1O14776 1098 aaKnown RBP23.86■■□□□ 1.41
TRAF4-201ENST00000262395 CROCC2H7BZ55 1655 aa23.86■■□□□ 1.41
TRAF4-201ENST00000262395 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
TRAF4-201ENST00000262395 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
TRAF4-201ENST00000262395 BACH2Q9BYV9 841 aa23.83■■□□□ 1.4
TRAF4-201ENST00000262395 CRBNQ96SW2 442 aa23.82■■□□□ 1.4
TRAF4-201ENST00000262395 NEFMP07197 916 aa23.82■■□□□ 1.4
TRAF4-201ENST00000262395 PER1O15534 1290 aaPredicted RBP23.81■■□□□ 1.4
TRAF4-201ENST00000262395 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
TRAF4-201ENST00000262395 PANK3Q9H999 370 aa23.79■■□□□ 1.4
TRAF4-201ENST00000262395 PARD3Q8TEW0 1356 aa23.79■■□□□ 1.4
TRAF4-201ENST00000262395 C20orf194Q5TEA3 1177 aa23.78■■□□□ 1.4
TRAF4-201ENST00000262395 CDC42BPAQ5VT25 1732 aa23.77■■□□□ 1.4
TRAF4-201ENST00000262395 RTN4Q9NQC3 1192 aaKnown RBP23.77■■□□□ 1.4
TRAF4-201ENST00000262395 DISP3Q9P2K9 1392 aa23.76■■□□□ 1.39
TRAF4-201ENST00000262395 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
TRAF4-201ENST00000262395 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
TRAF4-201ENST00000262395 PDE3BQ13370 1112 aa23.76■■□□□ 1.39
TRAF4-201ENST00000262395 IL27Q8NEV9 243 aa23.76■■□□□ 1.39
TRAF4-201ENST00000262395 CARMIL2Q6F5E8 1435 aa23.74■■□□□ 1.39
TRAF4-201ENST00000262395 ADCY10Q96PN6 1610 aa23.74■■□□□ 1.39
TRAF4-201ENST00000262395 SLC4A3P48751 1232 aa23.73■■□□□ 1.39
TRAF4-201ENST00000262395 MAGI1Q96QZ7 1491 aaPredicted RBP23.73■■□□□ 1.39
TRAF4-201ENST00000262395 CCDC144AA2RUR9 1427 aa23.73■■□□□ 1.39
TRAF4-201ENST00000262395 E9PCH4 1651 aa23.73■■□□□ 1.39
TRAF4-201ENST00000262395 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
TRAF4-201ENST00000262395 ATP10BO94823 1461 aa23.72■■□□□ 1.39
TRAF4-201ENST00000262395 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
TRAF4-201ENST00000262395 TESK2Q96S53 571 aa23.7■■□□□ 1.38
TRAF4-201ENST00000262395 MS4A1P11836 297 aa23.69■■□□□ 1.38
TRAF4-201ENST00000262395 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
TRAF4-201ENST00000262395 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
TRAF4-201ENST00000262395 FAM135AQ9P2D6 1515 aa23.68■■□□□ 1.38
TRAF4-201ENST00000262395 SHANK2Q9UPX8 1470 aa23.67■■□□□ 1.38
TRAF4-201ENST00000262395 PTPRGP23470 1445 aa23.66■■□□□ 1.38
TRAF4-201ENST00000262395 TRPM1Q7Z4N2 1603 aa23.64■■□□□ 1.37
TRAF4-201ENST00000262395 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
TRAF4-201ENST00000262395 TMF1P82094 1093 aa23.62■■□□□ 1.37
TRAF4-201ENST00000262395 A2MP01023 1474 aa23.62■■□□□ 1.37
TRAF4-201ENST00000262395 PLA2R1Q13018 1463 aa23.61■■□□□ 1.37
TRAF4-201ENST00000262395 ERBINQ96RT1 1412 aa23.61■■□□□ 1.37
TRAF4-201ENST00000262395 COL17A1Q9UMD9 1497 aaPredicted RBP23.6■■□□□ 1.37
TRAF4-201ENST00000262395 ABCA8O94911 1581 aa23.59■■□□□ 1.37
TRAF4-201ENST00000262395 BLMP54132 1417 aaPredicted RBP23.58■■□□□ 1.37
TRAF4-201ENST00000262395 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
TRAF4-201ENST00000262395 WDR43Q15061 677 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRAF4-201ENST00000262395 CCDC141Q6ZP82 1450 aa23.57■■□□□ 1.36
TRAF4-201ENST00000262395 PLEKHH1Q9ULM0 1364 aa23.56■■□□□ 1.36
TRAF4-201ENST00000262395 RGS3P49796 1198 aa23.56■■□□□ 1.36
TRAF4-201ENST00000262395 CCDC146Q8IYE0 955 aa23.56■■□□□ 1.36
TRAF4-201ENST00000262395 KNSTRNQ9Y448 316 aa23.55■■□□□ 1.36
TRAF4-201ENST00000262395 ERCC6Q03468 1493 aa23.55■■□□□ 1.36
TRAF4-201ENST00000262395 SAMD9LQ8IVG5 1584 aa23.54■■□□□ 1.36
TRAF4-201ENST00000262395 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
TRAF4-201ENST00000262395 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
TRAF4-201ENST00000262395 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
TRAF4-201ENST00000262395 WASHC2CQ9Y4E1 1318 aa23.53■■□□□ 1.36
TRAF4-201ENST00000262395 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
TRAF4-201ENST00000262395 DDRGK1Q96HY6 314 aa23.52■■□□□ 1.36
TRAF4-201ENST00000262395 DAXXQ9UER7 740 aaPredicted RBP23.52■■□□□ 1.36
TRAF4-201ENST00000262395 PLEKHH2Q8IVE3 1493 aa23.52■■□□□ 1.36
TRAF4-201ENST00000262395 NUP160Q12769 1436 aa23.51■■□□□ 1.35
TRAF4-201ENST00000262395 ZMYM4Q5VZL5 1548 aa23.51■■□□□ 1.35
TRAF4-201ENST00000262395 KDM2BQ8NHM5 1336 aa23.51■■□□□ 1.35
TRAF4-201ENST00000262395 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.5■■□□□ 1.35
TRAF4-201ENST00000262395 SYCP2Q9BX26 1530 aa23.5■■□□□ 1.35
TRAF4-201ENST00000262395 NFKBIBQ15653 356 aa23.49■■□□□ 1.35
TRAF4-201ENST00000262395 ARHGEF5Q12774 1597 aa23.49■■□□□ 1.35
TRAF4-201ENST00000262395 PRDM15P57071 1507 aaPredicted RBP23.48■■□□□ 1.35
TRAF4-201ENST00000262395 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
TRAF4-201ENST00000262395 GOLGA2Q08379 1002 aa23.48■■□□□ 1.35
TRAF4-201ENST00000262395 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
TRAF4-201ENST00000262395 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
TRAF4-201ENST00000262395 BRPF3Q9ULD4 1205 aa23.47■■□□□ 1.35
TRAF4-201ENST00000262395 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-201ENST00000262395 C8orf34Q49A92 452 aa23.45■■□□□ 1.34
TRAF4-201ENST00000262395 ARHGAP5Q13017 1502 aa23.44■■□□□ 1.34
TRAF4-201ENST00000262395 RSPH4AQ5TD94 716 aa23.44■■□□□ 1.34
TRAF4-201ENST00000262395 BCAR3O75815 825 aa23.43■■□□□ 1.34
TRAF4-201ENST00000262395 AMER1Q5JTC6 1135 aaPredicted RBP23.43■■□□□ 1.34
TRAF4-201ENST00000262395 FAM161AQ3B820 660 aa23.43■■□□□ 1.34
TRAF4-201ENST00000262395 MYO5CQ9NQX4 1742 aa23.43■■□□□ 1.34
TRAF4-201ENST00000262395 APAF1O14727 1248 aa23.42■■□□□ 1.34
TRAF4-201ENST00000262395 GSE1Q14687 1217 aa23.41■■□□□ 1.34
TRAF4-201ENST00000262395 WDR7Q9Y4E6 1490 aa23.4■■□□□ 1.34
TRAF4-201ENST00000262395 FRAT1Q92837 279 aaPredicted RBP23.39■■□□□ 1.34
TRAF4-201ENST00000262395 SLFN5Q08AF3 891 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms