RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 DISP1Q96F81 1524 aa13.45□□□□□ -0.26
KPNA3-201ENST00000261667 ESPNB1AK53 854 aa13.45□□□□□ -0.26
KPNA3-201ENST00000261667 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
KPNA3-201ENST00000261667 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
KPNA3-201ENST00000261667 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
KPNA3-201ENST00000261667 DDX11L8A8MPP1 907 aa13.44□□□□□ -0.26
KPNA3-201ENST00000261667 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
KPNA3-201ENST00000261667 AAMPQ13685 434 aa13.43□□□□□ -0.26
KPNA3-201ENST00000261667 CGNQ9P2M7 1197 aaKnown RBP13.43□□□□□ -0.26
KPNA3-201ENST00000261667 DRC7Q8IY82 874 aa13.42□□□□□ -0.26
KPNA3-201ENST00000261667 KANK4Q5T7N3 995 aaPredicted RBP13.42□□□□□ -0.26
KPNA3-201ENST00000261667 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
KPNA3-201ENST00000261667 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
KPNA3-201ENST00000261667 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
KPNA3-201ENST00000261667 MS4A1P11836 297 aa13.41□□□□□ -0.26
KPNA3-201ENST00000261667 FMN1Q68DA7 1419 aa13.4□□□□□ -0.26
KPNA3-201ENST00000261667 CHD1O14646 1710 aa13.4□□□□□ -0.26
KPNA3-201ENST00000261667 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
KPNA3-201ENST00000261667 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
KPNA3-201ENST00000261667 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
KPNA3-201ENST00000261667 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
KPNA3-201ENST00000261667 UQCRHLA0A096LP55 91 aa13.37□□□□□ -0.27
KPNA3-201ENST00000261667 UQCRHP07919 91 aa13.37□□□□□ -0.27
KPNA3-201ENST00000261667 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
KPNA3-201ENST00000261667 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
KPNA3-201ENST00000261667 MAGI3Q5TCQ9 1506 aa13.37□□□□□ -0.27
KPNA3-201ENST00000261667 NRDCO43847 1150 aa13.37□□□□□ -0.27
KPNA3-201ENST00000261667 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
KPNA3-201ENST00000261667 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
KPNA3-201ENST00000261667 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
KPNA3-201ENST00000261667 VGLL3A8MV65 326 aa13.35□□□□□ -0.27
KPNA3-201ENST00000261667 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
KPNA3-201ENST00000261667 CBX1P83916 185 aa13.33□□□□□ -0.27
KPNA3-201ENST00000261667 TEX35Q5T0J7 233 aa13.32□□□□□ -0.28
KPNA3-201ENST00000261667 SETD5Q9C0A6 1442 aa13.32□□□□□ -0.28
KPNA3-201ENST00000261667 NOM1Q5C9Z4 860 aaKnown RBP13.32□□□□□ -0.28
KPNA3-201ENST00000261667 HTATSF1O43719 755 aaKnown RBP13.31□□□□□ -0.28
KPNA3-201ENST00000261667 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
KPNA3-201ENST00000261667 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
KPNA3-201ENST00000261667 EXOC6Q8TAG9 804 aa13.31□□□□□ -0.28
KPNA3-201ENST00000261667 RAPGEF6Q8TEU7 1601 aa13.31□□□□□ -0.28
KPNA3-201ENST00000261667 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
KPNA3-201ENST00000261667 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
KPNA3-201ENST00000261667 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
KPNA3-201ENST00000261667 POGKQ9P215 609 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 PHLDB1Q86UU1 1377 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 TRAK2O60296 914 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 CLCN1P35523 988 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 GPS2Q13227 327 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 KCNJ4P48050 445 aa13.29□□□□□ -0.28
KPNA3-201ENST00000261667 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
KPNA3-201ENST00000261667 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
KPNA3-201ENST00000261667 EPRSP07814 1512 aaKnown RBP13.28□□□□□ -0.28
KPNA3-201ENST00000261667 SUPT6HQ7KZ85 1726 aaKnown RBP13.28□□□□□ -0.28
KPNA3-201ENST00000261667 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
KPNA3-201ENST00000261667 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.28
KPNA3-201ENST00000261667 HMGN5P82970 282 aaKnown RBP13.27□□□□□ -0.28
KPNA3-201ENST00000261667 DHX57Q6P158 1386 aaKnown RBP13.27□□□□□ -0.28
KPNA3-201ENST00000261667 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.28
KPNA3-201ENST00000261667 CHMP5Q9NZZ3 219 aa13.27□□□□□ -0.28
KPNA3-201ENST00000261667 ABCA8O94911 1581 aa13.27□□□□□ -0.29
KPNA3-201ENST00000261667 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
KPNA3-201ENST00000261667 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
KPNA3-201ENST00000261667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
KPNA3-201ENST00000261667 ERICH4A6NGS2 130 aa13.26□□□□□ -0.29
KPNA3-201ENST00000261667 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
KPNA3-201ENST00000261667 ADCY10Q96PN6 1610 aa13.26□□□□□ -0.29
KPNA3-201ENST00000261667 DIAPH3Q9NSV4 1193 aa13.25□□□□□ -0.29
KPNA3-201ENST00000261667 CCDC173Q0VFZ6 552 aa13.25□□□□□ -0.29
KPNA3-201ENST00000261667 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
KPNA3-201ENST00000261667 ZNF777Q9ULD5 760 aaPredicted RBP13.25□□□□□ -0.29
KPNA3-201ENST00000261667 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
KPNA3-201ENST00000261667 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
KPNA3-201ENST00000261667 GPATCH11Q8N954 259 aa13.23□□□□□ -0.29
KPNA3-201ENST00000261667 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
KPNA3-201ENST00000261667 CWC15Q9P013 229 aaKnown RBP13.23□□□□□ -0.29
KPNA3-201ENST00000261667 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
KPNA3-201ENST00000261667 ZSCAN30Q86W11 494 aa13.23□□□□□ -0.29
KPNA3-201ENST00000261667 BACH2Q9BYV9 841 aa13.23□□□□□ -0.29
KPNA3-201ENST00000261667 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
KPNA3-201ENST00000261667 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
KPNA3-201ENST00000261667 FTSJ3Q8IY81 847 aaKnown RBP13.22□□□□□ -0.29
KPNA3-201ENST00000261667 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
KPNA3-201ENST00000261667 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
KPNA3-201ENST00000261667 IPO4Q8TEX9 1081 aaKnown RBP13.22□□□□□ -0.29
KPNA3-201ENST00000261667 RAB3GAP2Q9H2M9 1393 aa13.22□□□□□ -0.29
KPNA3-201ENST00000261667 ZBED9Q6R2W3 1325 aa13.22□□□□□ -0.29
KPNA3-201ENST00000261667 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
KPNA3-201ENST00000261667 SMAP1Q8IYB5 467 aaPredicted RBP13.21□□□□□ -0.29
KPNA3-201ENST00000261667 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
KPNA3-201ENST00000261667 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
KPNA3-201ENST00000261667 GOLGA6L4A6NEF3 574 aa13.21□□□□□ -0.29
KPNA3-201ENST00000261667 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.3
KPNA3-201ENST00000261667 CASC1Q6TDU7 716 aa13.21□□□□□ -0.3
KPNA3-201ENST00000261667 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
KPNA3-201ENST00000261667 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
KPNA3-201ENST00000261667 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
KPNA3-201ENST00000261667 PDCL2Q8N4E4 241 aa13.2□□□□□ -0.3
KPNA3-201ENST00000261667 RBM25P49756 843 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms