RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 TNRQ92752 1358 aa24.46■■□□□ 1.51
RABEPK-201ENST00000259460 ANKLE2Q86XL3 938 aa24.45■■□□□ 1.5
RABEPK-201ENST00000259460 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
RABEPK-201ENST00000259460 UGGT1Q9NYU2 1555 aa24.39■■□□□ 1.49
RABEPK-201ENST00000259460 ZNF777Q9ULD5 760 aaPredicted RBP24.37■■□□□ 1.49
RABEPK-201ENST00000259460 XIRP1Q702N8 1843 aaKnown RBP24.37■■□□□ 1.49
RABEPK-201ENST00000259460 FAM135AQ9P2D6 1515 aa24.37■■□□□ 1.49
RABEPK-201ENST00000259460 PZPP20742 1482 aa24.36■■□□□ 1.49
RABEPK-201ENST00000259460 FBXO31Q5XUX0 539 aaPredicted RBP24.35■■□□□ 1.49
RABEPK-201ENST00000259460 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
RABEPK-201ENST00000259460 UPF1Q92900 1129 aaKnown RBP eCLIP24.34■■□□□ 1.49
RABEPK-201ENST00000259460 ARHGAP35Q9NRY4 1499 aa24.33■■□□□ 1.49
RABEPK-201ENST00000259460 THEMISQ8N1K5 641 aaPredicted RBP24.33■■□□□ 1.48
RABEPK-201ENST00000259460 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
RABEPK-201ENST00000259460 HNRNPMP52272 730 aaKnown RBP eCLIP24.32■■□□□ 1.48
RABEPK-201ENST00000259460 EEA1Q15075 1411 aa24.31■■□□□ 1.48
RABEPK-201ENST00000259460 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
RABEPK-201ENST00000259460 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
RABEPK-201ENST00000259460 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
RABEPK-201ENST00000259460 SRCAPQ6ZRS2 3230 aa24.28■■□□□ 1.48
RABEPK-201ENST00000259460 CCDC18Q5T9S5 1454 aa24.25■■□□□ 1.47
RABEPK-201ENST00000259460 MIA2Q96PC5 1412 aa24.25■■□□□ 1.47
RABEPK-201ENST00000259460 PLEKHH2Q8IVE3 1493 aa24.24■■□□□ 1.47
RABEPK-201ENST00000259460 KIAA1107Q9UPP5 1409 aa24.23■■□□□ 1.47
RABEPK-201ENST00000259460 GPATCH8Q9UKJ3 1502 aaKnown RBP24.22■■□□□ 1.47
RABEPK-201ENST00000259460 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
RABEPK-201ENST00000259460 PHLPP1O60346 1717 aa24.18■■□□□ 1.46
RABEPK-201ENST00000259460 SCAF11Q99590 1463 aaKnown RBP24.13■■□□□ 1.45
RABEPK-201ENST00000259460 DHX29Q7Z478 1369 aaKnown RBP24.12■■□□□ 1.45
RABEPK-201ENST00000259460 UBR1Q8IWV7 1749 aa24.12■■□□□ 1.45
RABEPK-201ENST00000259460 LRRC9Q6ZRR7 1453 aa24.11■■□□□ 1.45
RABEPK-201ENST00000259460 WASHC2CQ9Y4E1 1318 aa24.11■■□□□ 1.45
RABEPK-201ENST00000259460 KIF3BO15066 747 aa24.1■■□□□ 1.45
RABEPK-201ENST00000259460 JCADQ9P266 1359 aa24.1■■□□□ 1.45
RABEPK-201ENST00000259460 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
RABEPK-201ENST00000259460 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
RABEPK-201ENST00000259460 LRP6O75581 1613 aa24.09■■□□□ 1.45
RABEPK-201ENST00000259460 MAP3K1Q13233 1512 aa24.09■■□□□ 1.45
RABEPK-201ENST00000259460 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
RABEPK-201ENST00000259460 TMEM94Q12767 1356 aa24.06■■□□□ 1.44
RABEPK-201ENST00000259460 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
RABEPK-201ENST00000259460 RTEL1-TNFRSF6BF6WH68 1400 aa24.05■■□□□ 1.44
RABEPK-201ENST00000259460 ZNF772Q68DY9 489 aaPredicted RBP24.05■■□□□ 1.44
RABEPK-201ENST00000259460 COL16A1Q07092 1604 aaPredicted RBP24.04■■□□□ 1.44
RABEPK-201ENST00000259460 ERVK-7P63135 1459 aa24.02■■□□□ 1.44
RABEPK-201ENST00000259460 CCNB3Q8WWL7 1395 aa24.02■■□□□ 1.44
RABEPK-201ENST00000259460 MEX3CQ5U5Q3 659 aaKnown RBP24.02■■□□□ 1.44
RABEPK-201ENST00000259460 MBD5Q9P267 1494 aa24.01■■□□□ 1.43
RABEPK-201ENST00000259460 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
RABEPK-201ENST00000259460 SLIT1O75093 1534 aa24■■□□□ 1.43
RABEPK-201ENST00000259460 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
RABEPK-201ENST00000259460 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
RABEPK-201ENST00000259460 NCOA2Q15596 1464 aa23.99■■□□□ 1.43
RABEPK-201ENST00000259460 FYCO1Q9BQS8 1478 aa23.98■■□□□ 1.43
RABEPK-201ENST00000259460 TIAM1Q13009 1591 aa23.98■■□□□ 1.43
RABEPK-201ENST00000259460 ABCC3O15438 1527 aa23.97■■□□□ 1.43
RABEPK-201ENST00000259460 LTKP29376 864 aa23.97■■□□□ 1.43
RABEPK-201ENST00000259460 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
RABEPK-201ENST00000259460 RXRBP28702 533 aa23.96■■□□□ 1.43
RABEPK-201ENST00000259460 TXNDC2Q86VQ3 553 aa23.95■■□□□ 1.42
RABEPK-201ENST00000259460 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
RABEPK-201ENST00000259460 SHPRHQ149N8 1683 aa23.94■■□□□ 1.42
RABEPK-201ENST00000259460 SPATA31A6Q5VVP1 1343 aa23.94■■□□□ 1.42
RABEPK-201ENST00000259460 PRDM15P57071 1507 aaPredicted RBP23.92■■□□□ 1.42
RABEPK-201ENST00000259460 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
RABEPK-201ENST00000259460 CFAP65Q6ZU64 1925 aaKnown RBP23.91■■□□□ 1.42
RABEPK-201ENST00000259460 CEP152O94986 1710 aa23.9■■□□□ 1.42
RABEPK-201ENST00000259460 CCDC141Q6ZP82 1450 aa23.9■■□□□ 1.42
RABEPK-201ENST00000259460 MSH6P52701 1360 aa23.9■■□□□ 1.42
RABEPK-201ENST00000259460 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.42
RABEPK-201ENST00000259460 NWD1Q149M9 1564 aa23.89■■□□□ 1.42
RABEPK-201ENST00000259460 NKTRP30414 1462 aaKnown RBP23.89■■□□□ 1.41
RABEPK-201ENST00000259460 RGS12O14924 1447 aa23.87■■□□□ 1.41
RABEPK-201ENST00000259460 SETBP1Q9Y6X0 1596 aa23.87■■□□□ 1.41
RABEPK-201ENST00000259460 EID1Q9Y6B2 187 aa23.86■■□□□ 1.41
RABEPK-201ENST00000259460 SLAIN2Q9P270 581 aa23.85■■□□□ 1.41
RABEPK-201ENST00000259460 KDM5AP29375 1690 aaKnown RBP23.85■■□□□ 1.41
RABEPK-201ENST00000259460 KCNA6P17658 529 aa23.84■■□□□ 1.41
RABEPK-201ENST00000259460 PIK3C2BO00750 1634 aa23.84■■□□□ 1.41
RABEPK-201ENST00000259460 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
RABEPK-201ENST00000259460 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
RABEPK-201ENST00000259460 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
RABEPK-201ENST00000259460 MTUS2Q5JR59 1369 aa23.8■■□□□ 1.4
RABEPK-201ENST00000259460 TMEM2Q9UHN6 1383 aa23.79■■□□□ 1.4
RABEPK-201ENST00000259460 ZRANB1Q9UGI0 708 aa23.79■■□□□ 1.4
RABEPK-201ENST00000259460 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
RABEPK-201ENST00000259460 AFF2P51816 1311 aa23.78■■□□□ 1.4
RABEPK-201ENST00000259460 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
RABEPK-201ENST00000259460 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
RABEPK-201ENST00000259460 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
RABEPK-201ENST00000259460 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
RABEPK-201ENST00000259460 TET3O43151 1660 aa23.78■■□□□ 1.4
RABEPK-201ENST00000259460 SLC26A8Q96RN1 970 aa23.76■■□□□ 1.39
RABEPK-201ENST00000259460 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
RABEPK-201ENST00000259460 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
RABEPK-201ENST00000259460 FOXD1Q16676 465 aa23.73■■□□□ 1.39
RABEPK-201ENST00000259460 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
RABEPK-201ENST00000259460 ATAD2Q6PL18 1390 aa23.72■■□□□ 1.39
RABEPK-201ENST00000259460 ARHGEF5Q12774 1597 aa23.7■■□□□ 1.38
RABEPK-201ENST00000259460 RBM6P78332 1123 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms