RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 FOXK1P85037 733 aa8.31□□□□□ -1.08
TCN1-201ENST00000257264 TMEM106CQ9BVX2 250 aa8.31□□□□□ -1.08
TCN1-201ENST00000257264 MAP3K9P80192 1104 aa8.3□□□□□ -1.08
TCN1-201ENST00000257264 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
TCN1-201ENST00000257264 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
TCN1-201ENST00000257264 RETREG2Q8NC44 543 aa8.3□□□□□ -1.08
TCN1-201ENST00000257264 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
TCN1-201ENST00000257264 GZF1Q9H116 711 aaPredicted RBP8.3□□□□□ -1.08
TCN1-201ENST00000257264 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
TCN1-201ENST00000257264 ATP1B4Q9UN42 357 aaPredicted RBP8.29□□□□□ -1.08
TCN1-201ENST00000257264 MFAP1P55081 439 aaKnown RBP8.28□□□□□ -1.08
TCN1-201ENST00000257264 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
TCN1-201ENST00000257264 REPIN1Q9BWE0 567 aaKnown RBP8.27□□□□□ -1.09
TCN1-201ENST00000257264 CLCN1P35523 988 aa8.27□□□□□ -1.09
TCN1-201ENST00000257264 PDE4CQ08493 712 aa8.27□□□□□ -1.09
TCN1-201ENST00000257264 SPDYE5A6NIY4 337 aa8.26□□□□□ -1.09
TCN1-201ENST00000257264 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
TCN1-201ENST00000257264 PLPP6Q8IY26 295 aa8.26□□□□□ -1.09
TCN1-201ENST00000257264 PTGER2P43116 358 aa8.25□□□□□ -1.09
TCN1-201ENST00000257264 PTGDRQ13258 359 aa8.25□□□□□ -1.09
TCN1-201ENST00000257264 IRF5Q13568 498 aa8.25□□□□□ -1.09
TCN1-201ENST00000257264 COG6Q9Y2V7 657 aa8.25□□□□□ -1.09
TCN1-201ENST00000257264 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
TCN1-201ENST00000257264 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
TCN1-201ENST00000257264 ILDR1Q86SU0 546 aaPredicted RBP8.24□□□□□ -1.09
TCN1-201ENST00000257264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.09
TCN1-201ENST00000257264 ATN1P54259 1190 aaPredicted RBP8.23□□□□□ -1.09
TCN1-201ENST00000257264 PROCA1Q8NCQ7 364 aaPredicted RBP8.23□□□□□ -1.09
TCN1-201ENST00000257264 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
TCN1-201ENST00000257264 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
TCN1-201ENST00000257264 PATL2C9JE40 543 aaKnown RBP8.22□□□□□ -1.09
TCN1-201ENST00000257264 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
TCN1-201ENST00000257264 FBXW7Q969H0 707 aa8.22□□□□□ -1.09
TCN1-201ENST00000257264 SSTR3P32745 418 aaPredicted RBP8.22□□□□□ -1.09
TCN1-201ENST00000257264 BANK1Q8NDB2 785 aa8.22□□□□□ -1.09
TCN1-201ENST00000257264 DDX12PQ92771 950 aa8.22□□□□□ -1.09
TCN1-201ENST00000257264 LOC105371045A0A1W2PR82 267 aa8.21□□□□□ -1.1
TCN1-201ENST00000257264 SEC24BO95487 1268 aa8.21□□□□□ -1.1
TCN1-201ENST00000257264 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
TCN1-201ENST00000257264 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
TCN1-201ENST00000257264 POLR3EQ9NVU0 708 aa8.21□□□□□ -1.1
TCN1-201ENST00000257264 MDM2Q00987 491 aaPredicted RBP8.2□□□□□ -1.1
TCN1-201ENST00000257264 BEGAINQ9BUH8 593 aa8.2□□□□□ -1.1
TCN1-201ENST00000257264 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
TCN1-201ENST00000257264 MICALL2Q8IY33 904 aa8.19□□□□□ -1.1
TCN1-201ENST00000257264 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.19□□□□□ -1.1
TCN1-201ENST00000257264 SHROOM4Q9ULL8 1493 aa8.18□□□□□ -1.1
TCN1-201ENST00000257264 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
TCN1-201ENST00000257264 E9PSI1 815 aa8.17□□□□□ -1.1
TCN1-201ENST00000257264 TBC1D12O60347 775 aa8.17□□□□□ -1.1
TCN1-201ENST00000257264 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
TCN1-201ENST00000257264 TMEM259Q4ZIN3 620 aa8.16□□□□□ -1.1
TCN1-201ENST00000257264 UPF1Q92900 1129 aaKnown RBP eCLIP8.16□□□□□ -1.1
TCN1-201ENST00000257264 CALR3Q96L12 384 aaKnown RBP8.16□□□□□ -1.1
TCN1-201ENST00000257264 C2orf72A6NCS6 295 aa8.15□□□□□ -1.1
TCN1-201ENST00000257264 IGSF3O75054 1194 aa8.15□□□□□ -1.1
TCN1-201ENST00000257264 ZNF428Q96B54 188 aa8.15□□□□□ -1.1
TCN1-201ENST00000257264 RFC5P40937 340 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 MYSM1Q5VVJ2 828 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 DPY19L2Q6NUT2 758 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 KIF3CO14782 793 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 TIE1P35590 1138 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
TCN1-201ENST00000257264 KCNA1Q09470 495 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 BMP2KQ9NSY1 1161 aaPredicted RBP8.14□□□□□ -1.11
TCN1-201ENST00000257264 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
TCN1-201ENST00000257264 TRPC6Q9Y210 931 aa8.14□□□□□ -1.11
TCN1-201ENST00000257264 PHOX2BQ99453 314 aa8.13□□□□□ -1.11
TCN1-201ENST00000257264 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
TCN1-201ENST00000257264 BRD1O95696 1058 aa8.12□□□□□ -1.11
TCN1-201ENST00000257264 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
TCN1-201ENST00000257264 PRM3Q9NNZ6 103 aa8.12□□□□□ -1.11
TCN1-201ENST00000257264 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
TCN1-201ENST00000257264 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
TCN1-201ENST00000257264 EVI5O60447 810 aa8.1□□□□□ -1.11
TCN1-201ENST00000257264 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
TCN1-201ENST00000257264 NPDC1Q9NQX5 325 aaPredicted RBP8.1□□□□□ -1.11
TCN1-201ENST00000257264 TTLL13PA6NNM8 815 aa8.1□□□□□ -1.11
TCN1-201ENST00000257264 ST18O60284 1047 aa8.1□□□□□ -1.11
TCN1-201ENST00000257264 GLMNQ92990 594 aa8.1□□□□□ -1.11
TCN1-201ENST00000257264 PBXIP1Q96AQ6 731 aa8.09□□□□□ -1.11
TCN1-201ENST00000257264 TMEM121BQ9BXQ6 578 aaPredicted RBP8.09□□□□□ -1.11
TCN1-201ENST00000257264 TBC1D2Q9BYX2 928 aa8.09□□□□□ -1.11
TCN1-201ENST00000257264 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
TCN1-201ENST00000257264 OATP04181 439 aa8.08□□□□□ -1.12
TCN1-201ENST00000257264 ABL2P42684 1182 aa8.08□□□□□ -1.12
TCN1-201ENST00000257264 PPP2R2DQ66LE6 453 aa8.08□□□□□ -1.12
TCN1-201ENST00000257264 SPNS2Q8IVW8 549 aa8.08□□□□□ -1.12
TCN1-201ENST00000257264 MTMR14Q8NCE2 650 aa8.08□□□□□ -1.12
TCN1-201ENST00000257264 AMOTL2Q9Y2J4 779 aa8.08□□□□□ -1.12
TCN1-201ENST00000257264 G3V3G9 751 aa8.07□□□□□ -1.12
TCN1-201ENST00000257264 CDHR5Q9HBB8 845 aa8.07□□□□□ -1.12
TCN1-201ENST00000257264 SOCS7O14512 581 aa8.06□□□□□ -1.12
TCN1-201ENST00000257264 CSB-PGBD3P0DP91 1061 aa8.06□□□□□ -1.12
TCN1-201ENST00000257264 IER5LQ5T953 404 aa8.06□□□□□ -1.12
TCN1-201ENST00000257264 COLQQ9Y215 455 aaPredicted RBP8.06□□□□□ -1.12
TCN1-201ENST00000257264 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
TCN1-201ENST00000257264 MAP3K7O43318 606 aa8.05□□□□□ -1.12
TCN1-201ENST00000257264 EN1Q05925 392 aaPredicted RBP8.05□□□□□ -1.12
TCN1-201ENST00000257264 METTL3Q86U44 580 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms