RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
PCDH19-201ENST00000255531 PMFBP1Q8TBY8 1022 aa11.74□□□□□ -0.53
PCDH19-201ENST00000255531 HMGN5P82970 282 aaKnown RBP11.74□□□□□ -0.53
PCDH19-201ENST00000255531 RRP9O43818 475 aaKnown RBP11.73□□□□□ -0.53
PCDH19-201ENST00000255531 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
PCDH19-201ENST00000255531 CCP110O43303 1012 aa11.72□□□□□ -0.53
PCDH19-201ENST00000255531 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
PCDH19-201ENST00000255531 EIF3JO75822 258 aaKnown RBP11.71□□□□□ -0.53
PCDH19-201ENST00000255531 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
PCDH19-201ENST00000255531 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
PCDH19-201ENST00000255531 ENOX2Q16206 610 aaKnown RBP11.71□□□□□ -0.53
PCDH19-201ENST00000255531 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
PCDH19-201ENST00000255531 RABEP1Q15276 862 aa11.7□□□□□ -0.54
PCDH19-201ENST00000255531 R3HCC1Q9Y3T6 440 aaKnown RBP11.7□□□□□ -0.54
PCDH19-201ENST00000255531 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
PCDH19-201ENST00000255531 PPM1EQ8WY54 764 aa11.7□□□□□ -0.54
PCDH19-201ENST00000255531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCDH19-201ENST00000255531 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
PCDH19-201ENST00000255531 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
PCDH19-201ENST00000255531 CCDC175P0C221 793 aa11.7□□□□□ -0.54
PCDH19-201ENST00000255531 FAM184AQ8NB25 1140 aa11.7□□□□□ -0.54
PCDH19-201ENST00000255531 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
PCDH19-201ENST00000255531 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
PCDH19-201ENST00000255531 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
PCDH19-201ENST00000255531 GOLGA6L10A0A0M3HER8 536 aa11.68□□□□□ -0.54
PCDH19-201ENST00000255531 GPATCH11Q8N954 259 aa11.68□□□□□ -0.54
PCDH19-201ENST00000255531 CEP63Q96MT8 703 aa11.68□□□□□ -0.54
PCDH19-201ENST00000255531 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
PCDH19-201ENST00000255531 CLGNO14967 610 aa11.67□□□□□ -0.54
PCDH19-201ENST00000255531 HIRIP3Q9BW71 556 aaPredicted RBP11.67□□□□□ -0.54
PCDH19-201ENST00000255531 NAT10Q9H0A0 1025 aaKnown RBP11.67□□□□□ -0.54
PCDH19-201ENST00000255531 TCEAL9Q9UHQ7 104 aa11.67□□□□□ -0.54
PCDH19-201ENST00000255531 SASS6Q6UVJ0 657 aa11.67□□□□□ -0.54
PCDH19-201ENST00000255531 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
PCDH19-201ENST00000255531 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
PCDH19-201ENST00000255531 SLC26A8Q96RN1 970 aa11.66□□□□□ -0.54
PCDH19-201ENST00000255531 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
PCDH19-201ENST00000255531 PLPPR3Q6T4P5 718 aa11.66□□□□□ -0.54
PCDH19-201ENST00000255531 FBLN2P98095 1184 aa11.66□□□□□ -0.54
PCDH19-201ENST00000255531 SETSIPP0DME0 302 aa11.66□□□□□ -0.54
PCDH19-201ENST00000255531 FAM107BQ9H098 131 aa11.66□□□□□ -0.54
PCDH19-201ENST00000255531 ANKRD62A6NC57 917 aa11.65□□□□□ -0.54
PCDH19-201ENST00000255531 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
PCDH19-201ENST00000255531 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
PCDH19-201ENST00000255531 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
PCDH19-201ENST00000255531 CAVIN1Q6NZI2 390 aaKnown RBP11.65□□□□□ -0.54
PCDH19-201ENST00000255531 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
PCDH19-201ENST00000255531 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.55
PCDH19-201ENST00000255531 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.55
PCDH19-201ENST00000255531 EPS15P42566 896 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
PCDH19-201ENST00000255531 SKIDA1Q1XH10 827 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 CCDC146Q8IYE0 955 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 APBB1O00213 710 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 SEPT6Q14141 434 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 CALCOCO1Q9P1Z2 691 aa11.64□□□□□ -0.55
PCDH19-201ENST00000255531 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
PCDH19-201ENST00000255531 FEZ1Q99689 392 aa11.63□□□□□ -0.55
PCDH19-201ENST00000255531 ZFYVE27Q5T4F4 411 aa11.63□□□□□ -0.55
PCDH19-201ENST00000255531 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
PCDH19-201ENST00000255531 FYB1O15117 783 aa11.63□□□□□ -0.55
PCDH19-201ENST00000255531 ERLIN1O75477 346 aa11.63□□□□□ -0.55
PCDH19-201ENST00000255531 FOXD4L5Q5VV16 416 aaPredicted RBP11.63□□□□□ -0.55
PCDH19-201ENST00000255531 FOXD4L4Q8WXT5 416 aaPredicted RBP11.63□□□□□ -0.55
PCDH19-201ENST00000255531 PPP1R15AO75807 674 aaPredicted RBP11.62□□□□□ -0.55
PCDH19-201ENST00000255531 STAMBPO95630 424 aa11.62□□□□□ -0.55
PCDH19-201ENST00000255531 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
PCDH19-201ENST00000255531 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
PCDH19-201ENST00000255531 P3H3Q8IVL6 736 aa11.62□□□□□ -0.55
PCDH19-201ENST00000255531 OFD1O75665 1012 aa11.62□□□□□ -0.55
PCDH19-201ENST00000255531 TMCO5BA8MYB1 307 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 CCDC91Q7Z6B0 441 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 RBM25P49756 843 aaKnown RBP11.61□□□□□ -0.55
PCDH19-201ENST00000255531 TRIM29Q14134 588 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 DAAM2Q86T65 1068 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 SENP3-EIF4A1A0A087X0R7 540 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
PCDH19-201ENST00000255531 IRX3P78415 501 aaPredicted RBP11.61□□□□□ -0.55
PCDH19-201ENST00000255531 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
PCDH19-201ENST00000255531 CPLX2Q6PUV4 134 aaKnown RBP11.6□□□□□ -0.55
PCDH19-201ENST00000255531 NOL8Q76FK4 1167 aaKnown RBP11.6□□□□□ -0.55
PCDH19-201ENST00000255531 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
PCDH19-201ENST00000255531 TSPY4P0CV99 314 aa11.6□□□□□ -0.55
PCDH19-201ENST00000255531 TSPY10P0CW01 314 aa11.6□□□□□ -0.55
PCDH19-201ENST00000255531 FAM114A1Q8IWE2 563 aa11.6□□□□□ -0.55
PCDH19-201ENST00000255531 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
PCDH19-201ENST00000255531 IQCEQ6IPM2 695 aa11.6□□□□□ -0.55
PCDH19-201ENST00000255531 SHTN1A0MZ66 631 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 MCTP1Q6DN14 999 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 PDCL2Q8N4E4 241 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 MRE11P49959 708 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 PAIP2Q9BPZ3 127 aaKnown RBP11.59□□□□□ -0.55
PCDH19-201ENST00000255531 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 WDR66Q8TBY9 1149 aa11.59□□□□□ -0.55
PCDH19-201ENST00000255531 DDX23Q9BUQ8 820 aaKnown RBP11.59□□□□□ -0.55
PCDH19-201ENST00000255531 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms