RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
DCLK1-201ENST00000255448 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
DCLK1-201ENST00000255448 MTERF4Q7Z6M4 381 aaKnown RBP13.64□□□□□ -0.23
DCLK1-201ENST00000255448 PTPRGP23470 1445 aa13.64□□□□□ -0.23
DCLK1-201ENST00000255448 SOX12O15370 315 aa13.64□□□□□ -0.23
DCLK1-201ENST00000255448 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
DCLK1-201ENST00000255448 SETQ01105 290 aaPredicted RBP13.63□□□□□ -0.23
DCLK1-201ENST00000255448 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
DCLK1-201ENST00000255448 RALBP1Q15311 655 aa13.63□□□□□ -0.23
DCLK1-201ENST00000255448 FOXD1Q16676 465 aa13.63□□□□□ -0.23
DCLK1-201ENST00000255448 CHMP4AQ9BY43 222 aa13.63□□□□□ -0.23
DCLK1-201ENST00000255448 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
DCLK1-201ENST00000255448 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
DCLK1-201ENST00000255448 MSH5O43196 834 aa13.61□□□□□ -0.23
DCLK1-201ENST00000255448 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
DCLK1-201ENST00000255448 FOXD4L5Q5VV16 416 aaPredicted RBP13.61□□□□□ -0.23
DCLK1-201ENST00000255448 FOXD4L4Q8WXT5 416 aaPredicted RBP13.61□□□□□ -0.23
DCLK1-201ENST00000255448 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
DCLK1-201ENST00000255448 MRE11P49959 708 aa13.6□□□□□ -0.23
DCLK1-201ENST00000255448 TERF2IPQ9NYB0 399 aa13.6□□□□□ -0.23
DCLK1-201ENST00000255448 PHF14O94880 888 aa13.6□□□□□ -0.23
DCLK1-201ENST00000255448 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
DCLK1-201ENST00000255448 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
DCLK1-201ENST00000255448 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
DCLK1-201ENST00000255448 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
DCLK1-201ENST00000255448 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
DCLK1-201ENST00000255448 PLIN1O60240 522 aa13.58□□□□□ -0.24
DCLK1-201ENST00000255448 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
DCLK1-201ENST00000255448 APBB1O00213 710 aa13.58□□□□□ -0.24
DCLK1-201ENST00000255448 ZNF592Q92610 1267 aa13.58□□□□□ -0.24
DCLK1-201ENST00000255448 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
DCLK1-201ENST00000255448 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
DCLK1-201ENST00000255448 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
DCLK1-201ENST00000255448 CHMP5Q9NZZ3 219 aa13.56□□□□□ -0.24
DCLK1-201ENST00000255448 TEX35Q5T0J7 233 aa13.56□□□□□ -0.24
DCLK1-201ENST00000255448 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 CALRP27797 417 aaKnown RBP13.55□□□□□ -0.24
DCLK1-201ENST00000255448 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
DCLK1-201ENST00000255448 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 ITPRIPQ8IWB1 547 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 CCDC66A2RUB6 948 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
DCLK1-201ENST00000255448 NOL8Q76FK4 1167 aaKnown RBP13.54□□□□□ -0.24
DCLK1-201ENST00000255448 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
DCLK1-201ENST00000255448 CRBNQ96SW2 442 aa13.54□□□□□ -0.24
DCLK1-201ENST00000255448 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
DCLK1-201ENST00000255448 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
DCLK1-201ENST00000255448 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
DCLK1-201ENST00000255448 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
DCLK1-201ENST00000255448 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
DCLK1-201ENST00000255448 PDE4CQ08493 712 aa13.52□□□□□ -0.25
DCLK1-201ENST00000255448 GPS2Q13227 327 aa13.51□□□□□ -0.25
DCLK1-201ENST00000255448 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
DCLK1-201ENST00000255448 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
DCLK1-201ENST00000255448 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
DCLK1-201ENST00000255448 TPM4P67936 248 aa13.51□□□□□ -0.25
DCLK1-201ENST00000255448 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
DCLK1-201ENST00000255448 GNL2Q13823 731 aaKnown RBP13.5□□□□□ -0.25
DCLK1-201ENST00000255448 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
DCLK1-201ENST00000255448 HDAC5Q9UQL6 1122 aa13.5□□□□□ -0.25
DCLK1-201ENST00000255448 NOM1Q5C9Z4 860 aaKnown RBP13.49□□□□□ -0.25
DCLK1-201ENST00000255448 ST18O60284 1047 aa13.49□□□□□ -0.25
DCLK1-201ENST00000255448 TRAK2O60296 914 aa13.49□□□□□ -0.25
DCLK1-201ENST00000255448 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
DCLK1-201ENST00000255448 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
DCLK1-201ENST00000255448 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
DCLK1-201ENST00000255448 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
DCLK1-201ENST00000255448 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
DCLK1-201ENST00000255448 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
DCLK1-201ENST00000255448 DIAPH3Q9NSV4 1193 aa13.47□□□□□ -0.25
DCLK1-201ENST00000255448 IGF1RP08069 1367 aa13.47□□□□□ -0.25
DCLK1-201ENST00000255448 KIF16BQ96L93 1317 aa13.46□□□□□ -0.25
DCLK1-201ENST00000255448 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.26
DCLK1-201ENST00000255448 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.26
DCLK1-201ENST00000255448 ESPNB1AK53 854 aa13.45□□□□□ -0.26
DCLK1-201ENST00000255448 PRDM10Q9NQV6 1147 aa13.45□□□□□ -0.26
DCLK1-201ENST00000255448 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
DCLK1-201ENST00000255448 AMPHP49418 695 aa13.44□□□□□ -0.26
DCLK1-201ENST00000255448 UQCRHLA0A096LP55 91 aa13.44□□□□□ -0.26
DCLK1-201ENST00000255448 UQCRHP07919 91 aa13.44□□□□□ -0.26
DCLK1-201ENST00000255448 PATL2C9JE40 543 aaKnown RBP13.43□□□□□ -0.26
DCLK1-201ENST00000255448 GOLGA6L19H0YKK7 550 aa13.43□□□□□ -0.26
DCLK1-201ENST00000255448 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
DCLK1-201ENST00000255448 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
DCLK1-201ENST00000255448 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 RUSC2Q8N2Y8 1516 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
DCLK1-201ENST00000255448 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 RNF214Q8ND24 703 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
DCLK1-201ENST00000255448 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
DCLK1-201ENST00000255448 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
DCLK1-201ENST00000255448 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
DCLK1-201ENST00000255448 CWC15Q9P013 229 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms