RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.193e-6■■■■□ 26.6
GSE1-201ENST00000253458 MS4A1P11836 297 aa16.24■□□□□ 0.19
GSE1-201ENST00000253458 CHMP4BQ9H444 224 aaKnown RBP16.24■□□□□ 0.19
GSE1-201ENST00000253458 FYB1O15117 783 aa16.23■□□□□ 0.19
GSE1-201ENST00000253458 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
GSE1-201ENST00000253458 CHAF1AQ13111 956 aaPredicted RBP16.22■□□□□ 0.19
GSE1-201ENST00000253458 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
GSE1-201ENST00000253458 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
GSE1-201ENST00000253458 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
GSE1-201ENST00000253458 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
GSE1-201ENST00000253458 CUX2O14529 1486 aa16.2■□□□□ 0.18
GSE1-201ENST00000253458 TCEAL9Q9UHQ7 104 aa16.19■□□□□ 0.18
GSE1-201ENST00000253458 NUP155O75694 1391 aa16.19■□□□□ 0.18
GSE1-201ENST00000253458 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
GSE1-201ENST00000253458 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
GSE1-201ENST00000253458 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
GSE1-201ENST00000253458 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
GSE1-201ENST00000253458 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
GSE1-201ENST00000253458 PLIN1O60240 522 aa16.17■□□□□ 0.18
GSE1-201ENST00000253458 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
GSE1-201ENST00000253458 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
GSE1-201ENST00000253458 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
GSE1-201ENST00000253458 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
GSE1-201ENST00000253458 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
GSE1-201ENST00000253458 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
GSE1-201ENST00000253458 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
GSE1-201ENST00000253458 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
GSE1-201ENST00000253458 PSME1Q06323 249 aa16.14■□□□□ 0.17
GSE1-201ENST00000253458 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
GSE1-201ENST00000253458 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
GSE1-201ENST00000253458 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
GSE1-201ENST00000253458 MCTP1Q6DN14 999 aa16.13■□□□□ 0.17
GSE1-201ENST00000253458 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
GSE1-201ENST00000253458 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
GSE1-201ENST00000253458 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
GSE1-201ENST00000253458 CEP89Q96ST8 783 aa16.12■□□□□ 0.17
GSE1-201ENST00000253458 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
GSE1-201ENST00000253458 TPD52L1Q16890 204 aaPredicted RBP16.11■□□□□ 0.17
GSE1-201ENST00000253458 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
GSE1-201ENST00000253458 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
GSE1-201ENST00000253458 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
GSE1-201ENST00000253458 CCAR2Q8N163 923 aaKnown RBP16.1■□□□□ 0.17
GSE1-201ENST00000253458 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
GSE1-201ENST00000253458 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
GSE1-201ENST00000253458 CHMP4CQ96CF2 233 aa16.08■□□□□ 0.17
GSE1-201ENST00000253458 H3BQV1 296 aa16.08■□□□□ 0.16
GSE1-201ENST00000253458 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
GSE1-201ENST00000253458 AK7Q96M32 723 aa16.08■□□□□ 0.16
GSE1-201ENST00000253458 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
GSE1-201ENST00000253458 TEFQ10587 303 aa16.07■□□□□ 0.16
GSE1-201ENST00000253458 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
GSE1-201ENST00000253458 CCDC27Q2M243 656 aa16.07■□□□□ 0.16
GSE1-201ENST00000253458 EEA1Q15075 1411 aa16.06■□□□□ 0.16
GSE1-201ENST00000253458 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
GSE1-201ENST00000253458 SOGA1O94964 1423 aa16.06■□□□□ 0.16
GSE1-201ENST00000253458 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
GSE1-201ENST00000253458 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
GSE1-201ENST00000253458 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
GSE1-201ENST00000253458 PCMTD1Q96MG8 357 aaPredicted RBP16.05■□□□□ 0.16
GSE1-201ENST00000253458 C9orf78Q9NZ63 289 aaPredicted RBP16.05■□□□□ 0.16
GSE1-201ENST00000253458 GOLGA6L1Q8N7Z2 621 aa16.04■□□□□ 0.16
GSE1-201ENST00000253458 HMOX1P09601 288 aa16.04■□□□□ 0.16
GSE1-201ENST00000253458 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
GSE1-201ENST00000253458 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
GSE1-201ENST00000253458 COG3Q96JB2 828 aa16.03■□□□□ 0.16
GSE1-201ENST00000253458 TPM4P67936 248 aa16.03■□□□□ 0.16
GSE1-201ENST00000253458 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
GSE1-201ENST00000253458 FAM184AQ8NB25 1140 aa16.03■□□□□ 0.16
GSE1-201ENST00000253458 KIF16BQ96L93 1317 aa16.02■□□□□ 0.16
GSE1-201ENST00000253458 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.15
GSE1-201ENST00000253458 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.15
GSE1-201ENST00000253458 HMMRO75330 724 aa16.01■□□□□ 0.15
GSE1-201ENST00000253458 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
GSE1-201ENST00000253458 IKQ13123 557 aaPredicted RBP16.01■□□□□ 0.15
GSE1-201ENST00000253458 SETQ01105 290 aaPredicted RBP16■□□□□ 0.15
GSE1-201ENST00000253458 GBP4Q96PP9 640 aa16■□□□□ 0.15
GSE1-201ENST00000253458 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
GSE1-201ENST00000253458 ABCC8Q09428 1581 aa16■□□□□ 0.15
GSE1-201ENST00000253458 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
GSE1-201ENST00000253458 PANK3Q9H999 370 aa15.99■□□□□ 0.15
GSE1-201ENST00000253458 ATF3P18847 181 aa15.99■□□□□ 0.15
GSE1-201ENST00000253458 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
GSE1-201ENST00000253458 NLRP2Q9NX02 1062 aa15.98■□□□□ 0.15
GSE1-201ENST00000253458 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
GSE1-201ENST00000253458 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
GSE1-201ENST00000253458 NEUROD6Q96NK8 337 aa15.98■□□□□ 0.15
GSE1-201ENST00000253458 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
GSE1-201ENST00000253458 RRP12Q5JTH9 1297 aaKnown RBP15.97■□□□□ 0.15
GSE1-201ENST00000253458 AMOTL1Q8IY63 956 aa15.97■□□□□ 0.15
GSE1-201ENST00000253458 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
GSE1-201ENST00000253458 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.15
GSE1-201ENST00000253458 L3MBTL2Q969R5 705 aa15.95■□□□□ 0.14
GSE1-201ENST00000253458 PLCD4Q9BRC7 762 aa15.95■□□□□ 0.14
GSE1-201ENST00000253458 ZNF592Q92610 1267 aa15.95■□□□□ 0.14
GSE1-201ENST00000253458 SYNE3Q6ZMZ3 975 aa15.95■□□□□ 0.14
GSE1-201ENST00000253458 ANO2Q9NQ90 1003 aa15.95■□□□□ 0.14
GSE1-201ENST00000253458 CCAR1Q8IX12 1150 aaKnown RBP15.94■□□□□ 0.14
GSE1-201ENST00000253458 TPM3P06753 285 aa15.94■□□□□ 0.14
GSE1-201ENST00000253458 ATP2B2Q01814 1243 aa15.94■□□□□ 0.14
GSE1-201ENST00000253458 RBM19Q9Y4C8 960 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms