RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 KDM5CP41229 1560 aa18.34■□□□□ 0.53
GFAP-201ENST00000253408 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
GFAP-201ENST00000253408 KIF14Q15058 1648 aa18.34■□□□□ 0.53
GFAP-201ENST00000253408 JPH4Q96JJ6 628 aa18.34■□□□□ 0.53
GFAP-201ENST00000253408 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
GFAP-201ENST00000253408 TCERG1O14776 1098 aaKnown RBP18.33■□□□□ 0.52
GFAP-201ENST00000253408 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
GFAP-201ENST00000253408 CRBNQ96SW2 442 aa18.32■□□□□ 0.52
GFAP-201ENST00000253408 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
GFAP-201ENST00000253408 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
GFAP-201ENST00000253408 PANK3Q9H999 370 aa18.3■□□□□ 0.52
GFAP-201ENST00000253408 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
GFAP-201ENST00000253408 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
GFAP-201ENST00000253408 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
GFAP-201ENST00000253408 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.51
GFAP-201ENST00000253408 BACH2Q9BYV9 841 aa18.26■□□□□ 0.51
GFAP-201ENST00000253408 C20orf194Q5TEA3 1177 aa18.25■□□□□ 0.51
GFAP-201ENST00000253408 CARMIL2Q6F5E8 1435 aa18.25■□□□□ 0.51
GFAP-201ENST00000253408 ADGBQ8N7X0 1667 aa18.24■□□□□ 0.51
GFAP-201ENST00000253408 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
GFAP-201ENST00000253408 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
GFAP-201ENST00000253408 ITSN2Q9NZM3 1697 aa18.24■□□□□ 0.51
GFAP-201ENST00000253408 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
GFAP-201ENST00000253408 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
GFAP-201ENST00000253408 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
GFAP-201ENST00000253408 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
GFAP-201ENST00000253408 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
GFAP-201ENST00000253408 RGS3P49796 1198 aa18.21■□□□□ 0.5
GFAP-201ENST00000253408 ADAMTS8Q9UP79 889 aa18.2■□□□□ 0.5
GFAP-201ENST00000253408 DISP3Q9P2K9 1392 aa18.2■□□□□ 0.5
GFAP-201ENST00000253408 TMF1P82094 1093 aa18.2■□□□□ 0.5
GFAP-201ENST00000253408 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
GFAP-201ENST00000253408 PARD3Q8TEW0 1356 aa18.18■□□□□ 0.5
GFAP-201ENST00000253408 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
GFAP-201ENST00000253408 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
GFAP-201ENST00000253408 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
GFAP-201ENST00000253408 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
GFAP-201ENST00000253408 MS4A1P11836 297 aa18.16■□□□□ 0.5
GFAP-201ENST00000253408 ARHGEF12Q9NZN5 1544 aa18.14■□□□□ 0.49
GFAP-201ENST00000253408 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
GFAP-201ENST00000253408 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
GFAP-201ENST00000253408 PRAG1Q86YV5 1406 aa18.13■□□□□ 0.49
GFAP-201ENST00000253408 ATP10BO94823 1461 aa18.13■□□□□ 0.49
GFAP-201ENST00000253408 CROCC2H7BZ55 1655 aa18.13■□□□□ 0.49
GFAP-201ENST00000253408 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
GFAP-201ENST00000253408 TESK2Q96S53 571 aa18.12■□□□□ 0.49
GFAP-201ENST00000253408 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
GFAP-201ENST00000253408 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
GFAP-201ENST00000253408 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
GFAP-201ENST00000253408 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
GFAP-201ENST00000253408 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
GFAP-201ENST00000253408 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
GFAP-201ENST00000253408 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
GFAP-201ENST00000253408 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
GFAP-201ENST00000253408 ABCC10Q5T3U5 1492 aa18.06■□□□□ 0.48
GFAP-201ENST00000253408 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
GFAP-201ENST00000253408 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
GFAP-201ENST00000253408 PTPRGP23470 1445 aa18.05■□□□□ 0.48
GFAP-201ENST00000253408 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
GFAP-201ENST00000253408 SHANK2Q9UPX8 1470 aa18.05■□□□□ 0.48
GFAP-201ENST00000253408 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
GFAP-201ENST00000253408 KDM5DQ9BY66 1539 aa18.05■□□□□ 0.48
GFAP-201ENST00000253408 A2MP01023 1474 aa18.05■□□□□ 0.48
GFAP-201ENST00000253408 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
GFAP-201ENST00000253408 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
GFAP-201ENST00000253408 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
GFAP-201ENST00000253408 NEUROD2Q15784 382 aa18.03■□□□□ 0.48
GFAP-201ENST00000253408 CENPQQ7L2Z9 268 aaPredicted RBP18.03■□□□□ 0.48
GFAP-201ENST00000253408 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
GFAP-201ENST00000253408 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
GFAP-201ENST00000253408 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
GFAP-201ENST00000253408 APAF1O14727 1248 aa18.03■□□□□ 0.48
GFAP-201ENST00000253408 DUSP27Q5VZP5 1158 aa18.03■□□□□ 0.48
GFAP-201ENST00000253408 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.47
GFAP-201ENST00000253408 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
GFAP-201ENST00000253408 BCAR3O75815 825 aa18.01■□□□□ 0.47
GFAP-201ENST00000253408 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
GFAP-201ENST00000253408 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
GFAP-201ENST00000253408 WASHC2CQ9Y4E1 1318 aa18■□□□□ 0.47
GFAP-201ENST00000253408 E9PCH4 1651 aa18■□□□□ 0.47
GFAP-201ENST00000253408 BLMP54132 1417 aaPredicted RBP18■□□□□ 0.47
GFAP-201ENST00000253408 RSPH4AQ5TD94 716 aa17.99■□□□□ 0.47
GFAP-201ENST00000253408 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
GFAP-201ENST00000253408 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
GFAP-201ENST00000253408 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
GFAP-201ENST00000253408 GSE1Q14687 1217 aa17.98■□□□□ 0.47
GFAP-201ENST00000253408 FRAT1Q92837 279 aaPredicted RBP17.98■□□□□ 0.47
GFAP-201ENST00000253408 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
GFAP-201ENST00000253408 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.47
GFAP-201ENST00000253408 ABCA8O94911 1581 aa17.96■□□□□ 0.47
GFAP-201ENST00000253408 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
GFAP-201ENST00000253408 SAMD9LQ8IVG5 1584 aa17.95■□□□□ 0.46
GFAP-201ENST00000253408 ZMYM4Q5VZL5 1548 aa17.95■□□□□ 0.46
GFAP-201ENST00000253408 C8orf34Q49A92 452 aa17.95■□□□□ 0.46
GFAP-201ENST00000253408 GPRASP1Q5JY77 1395 aa17.94■□□□□ 0.46
GFAP-201ENST00000253408 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
GFAP-201ENST00000253408 ARXQ96QS3 562 aa17.94■□□□□ 0.46
GFAP-201ENST00000253408 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
GFAP-201ENST00000253408 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
GFAP-201ENST00000253408 MAGI2Q86UL8 1455 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms