RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 TEFQ10587 303 aa18.01■□□□□ 0.47
ZC3H4-201ENST00000253048 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
ZC3H4-201ENST00000253048 VPS37DQ86XT2 251 aa18.01■□□□□ 0.47
ZC3H4-201ENST00000253048 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
ZC3H4-201ENST00000253048 HMMRO75330 724 aa18■□□□□ 0.47
ZC3H4-201ENST00000253048 PIP4K2BP78356 416 aa18■□□□□ 0.47
ZC3H4-201ENST00000253048 HSCBQ8IWL3 235 aa18■□□□□ 0.47
ZC3H4-201ENST00000253048 NGEFQ8N5V2 710 aa18■□□□□ 0.47
ZC3H4-201ENST00000253048 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
ZC3H4-201ENST00000253048 CCDC34Q96HJ3 373 aa17.99■□□□□ 0.47
ZC3H4-201ENST00000253048 NUTM2BA6NNL0 878 aaPredicted RBP17.99■□□□□ 0.47
ZC3H4-201ENST00000253048 NUTM2EB1AL46 878 aaPredicted RBP17.99■□□□□ 0.47
ZC3H4-201ENST00000253048 NUTM2AQ8IVF1 878 aaPredicted RBP17.99■□□□□ 0.47
ZC3H4-201ENST00000253048 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
ZC3H4-201ENST00000253048 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
ZC3H4-201ENST00000253048 TRIM6-TRIM34B2RNG4 842 aa17.96■□□□□ 0.47
ZC3H4-201ENST00000253048 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
ZC3H4-201ENST00000253048 DRC7Q8IY82 874 aa17.94■□□□□ 0.46
ZC3H4-201ENST00000253048 PDE4CQ08493 712 aa17.94■□□□□ 0.46
ZC3H4-201ENST00000253048 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
ZC3H4-201ENST00000253048 NOC3LQ8WTT2 800 aaKnown RBP17.93■□□□□ 0.46
ZC3H4-201ENST00000253048 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
ZC3H4-201ENST00000253048 RAPGEF4Q8WZA2 1011 aa17.92■□□□□ 0.46
ZC3H4-201ENST00000253048 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
ZC3H4-201ENST00000253048 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
ZC3H4-201ENST00000253048 CEP89Q96ST8 783 aa17.91■□□□□ 0.46
ZC3H4-201ENST00000253048 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
ZC3H4-201ENST00000253048 SMC4Q9NTJ3 1288 aa17.9■□□□□ 0.46
ZC3H4-201ENST00000253048 SETD5Q9C0A6 1442 aa17.9■□□□□ 0.46
ZC3H4-201ENST00000253048 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
ZC3H4-201ENST00000253048 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
ZC3H4-201ENST00000253048 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
ZC3H4-201ENST00000253048 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
ZC3H4-201ENST00000253048 NLRP2Q9NX02 1062 aa17.88■□□□□ 0.45
ZC3H4-201ENST00000253048 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
ZC3H4-201ENST00000253048 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
ZC3H4-201ENST00000253048 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 LRRFIP1Q32MZ4 808 aaKnown RBP17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 TPM4P67936 248 aa17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 RWDD1Q9H446 243 aaPredicted RBP17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 USP35Q9P2H5 1018 aa17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
ZC3H4-201ENST00000253048 RALBP1Q15311 655 aa17.85■□□□□ 0.45
ZC3H4-201ENST00000253048 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
ZC3H4-201ENST00000253048 CREBRFQ8IUR6 639 aa17.84■□□□□ 0.45
ZC3H4-201ENST00000253048 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
ZC3H4-201ENST00000253048 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
ZC3H4-201ENST00000253048 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.45
ZC3H4-201ENST00000253048 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
ZC3H4-201ENST00000253048 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
ZC3H4-201ENST00000253048 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
ZC3H4-201ENST00000253048 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
ZC3H4-201ENST00000253048 CCDC43Q96MW1 224 aaKnown RBP17.82■□□□□ 0.44
ZC3H4-201ENST00000253048 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
ZC3H4-201ENST00000253048 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
ZC3H4-201ENST00000253048 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
ZC3H4-201ENST00000253048 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
ZC3H4-201ENST00000253048 TIMELESSQ9UNS1 1208 aa17.8■□□□□ 0.44
ZC3H4-201ENST00000253048 CGNL1Q0VF96 1302 aa17.79■□□□□ 0.44
ZC3H4-201ENST00000253048 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
ZC3H4-201ENST00000253048 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
ZC3H4-201ENST00000253048 SPRYD3Q8NCJ5 442 aa17.78■□□□□ 0.44
ZC3H4-201ENST00000253048 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
ZC3H4-201ENST00000253048 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.43
ZC3H4-201ENST00000253048 TXNDC2Q86VQ3 553 aa17.77■□□□□ 0.43
ZC3H4-201ENST00000253048 APPP05067 770 aa17.76■□□□□ 0.43
ZC3H4-201ENST00000253048 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
ZC3H4-201ENST00000253048 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
ZC3H4-201ENST00000253048 PPP4R2Q9NY27 417 aa17.75■□□□□ 0.43
ZC3H4-201ENST00000253048 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
ZC3H4-201ENST00000253048 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
ZC3H4-201ENST00000253048 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
ZC3H4-201ENST00000253048 POGZQ7Z3K3 1410 aa17.74■□□□□ 0.43
ZC3H4-201ENST00000253048 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
ZC3H4-201ENST00000253048 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
ZC3H4-201ENST00000253048 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
ZC3H4-201ENST00000253048 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
ZC3H4-201ENST00000253048 NAP1L5Q96NT1 182 aaPredicted RBP17.71■□□□□ 0.43
ZC3H4-201ENST00000253048 KIF16BQ96L93 1317 aa17.71■□□□□ 0.43
ZC3H4-201ENST00000253048 KIF6Q6ZMV9 814 aa17.71■□□□□ 0.43
ZC3H4-201ENST00000253048 DHX57Q6P158 1386 aaKnown RBP17.71■□□□□ 0.43
ZC3H4-201ENST00000253048 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 FAM177BA6PVY3 158 aa17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
ZC3H4-201ENST00000253048 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 PES1O00541 588 aaKnown RBP17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 WWC2Q6AWC2 1192 aa17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 NOL8Q76FK4 1167 aaKnown RBP17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 NLRP6P59044 892 aa17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 TPM2P07951 284 aa17.69■□□□□ 0.42
ZC3H4-201ENST00000253048 ERICH2A1L162 156 aa17.68■□□□□ 0.42
ZC3H4-201ENST00000253048 FYB1O15117 783 aa17.68■□□□□ 0.42
ZC3H4-201ENST00000253048 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms