RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 ADGRL2O95490 1459 aa38.59■■■■□ 3.77
LSM7-201ENST00000252622 ZMYM3Q14202 1370 aa38.58■■■■□ 3.77
LSM7-201ENST00000252622 ERBINQ96RT1 1412 aa38.57■■■■□ 3.77
LSM7-201ENST00000252622 PREX1Q8TCU6 1659 aa38.56■■■■□ 3.76
LSM7-201ENST00000252622 KDM5DQ9BY66 1539 aa38.56■■■■□ 3.76
LSM7-201ENST00000252622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.56■■■■□ 3.76
LSM7-201ENST00000252622 NCOA1Q15788 1441 aa38.55■■■■□ 3.76
LSM7-201ENST00000252622 RRP7BPQ9NSQ0 103 aa38.55■■■■□ 3.76
LSM7-201ENST00000252622 CHIC2Q9UKJ5 165 aa38.54■■■■□ 3.76
LSM7-201ENST00000252622 NPATQ14207 1427 aa38.53■■■■□ 3.76
LSM7-201ENST00000252622 SETD1BQ9UPS6 1966 aaKnown RBP38.5■■■■□ 3.75
LSM7-201ENST00000252622 MROH1Q8NDA8 1641 aa38.49■■■■□ 3.75
LSM7-201ENST00000252622 UHRF1BP1Q6BDS2 1440 aa38.46■■■■□ 3.75
LSM7-201ENST00000252622 WASHC2CQ9Y4E1 1318 aa38.46■■■■□ 3.75
LSM7-201ENST00000252622 PTPRKQ15262 1439 aa38.46■■■■□ 3.75
LSM7-201ENST00000252622 RRBP1Q9P2E9 1410 aaKnown RBP38.46■■■■□ 3.75
LSM7-201ENST00000252622 ZC3H13Q5T200 1668 aaKnown RBP38.44■■■■□ 3.74
LSM7-201ENST00000252622 ABCC3O15438 1527 aa38.42■■■■□ 3.74
LSM7-201ENST00000252622 PRDM15P57071 1507 aaPredicted RBP38.42■■■■□ 3.74
LSM7-201ENST00000252622 DEPDC5O75140 1603 aa38.39■■■■□ 3.74
LSM7-201ENST00000252622 PZPP20742 1482 aa38.39■■■■□ 3.74
LSM7-201ENST00000252622 ROCK1Q13464 1354 aa38.38■■■■□ 3.73
LSM7-201ENST00000252622 HSPA2P54652 639 aa38.36■■■■□ 3.73
LSM7-201ENST00000252622 ANKRD50Q9ULJ7 1429 aa38.33■■■■□ 3.73
LSM7-201ENST00000252622 MYO3AQ8NEV4 1616 aa38.3■■■■□ 3.72
LSM7-201ENST00000252622 CEP152O94986 1710 aa38.29■■■■□ 3.72
LSM7-201ENST00000252622 CAMSAP1Q5T5Y3 1602 aa38.27■■■■□ 3.72
LSM7-201ENST00000252622 ITGAEP38570 1179 aa38.26■■■■□ 3.72
LSM7-201ENST00000252622 ZNF142P52746 1687 aaPredicted RBP38.25■■■■□ 3.71
LSM7-201ENST00000252622 KANK1Q14678 1352 aa38.25■■■■□ 3.71
LSM7-201ENST00000252622 VWDEQ8N2E2 1590 aa38.25■■■■□ 3.71
LSM7-201ENST00000252622 FBXO31Q5XUX0 539 aaPredicted RBP38.23■■■■□ 3.71
LSM7-201ENST00000252622 TNRQ92752 1358 aa38.22■■■■□ 3.71
LSM7-201ENST00000252622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.21■■■■□ 3.718e-8■■□□□ 14
LSM7-201ENST00000252622 CEP170BQ9Y4F5 1589 aaPredicted RBP38.21■■■■□ 3.71
LSM7-201ENST00000252622 LMTK2Q8IWU2 1503 aa38.21■■■■□ 3.71
LSM7-201ENST00000252622 ARHGAP31Q2M1Z3 1444 aa38.2■■■■□ 3.71
LSM7-201ENST00000252622 SPATA31D1Q6ZQQ2 1576 aa38.18■■■■□ 3.7
LSM7-201ENST00000252622 A2ML1A8K2U0 1454 aa38.15■■■■□ 3.7
LSM7-201ENST00000252622 ERVK-7P63135 1459 aa38.15■■■■□ 3.7
LSM7-201ENST00000252622 UNC13BO14795 1591 aa38.14■■■■□ 3.7
LSM7-201ENST00000252622 NLRP1Q9C000 1473 aa38.11■■■■□ 3.69
LSM7-201ENST00000252622 STRCQ7RTU9 1775 aa38.09■■■■□ 3.69
LSM7-201ENST00000252622 EFCAB6Q5THR3 1501 aa38.07■■■■□ 3.69
LSM7-201ENST00000252622 PLA2R1Q13018 1463 aa38.05■■■■□ 3.68
LSM7-201ENST00000252622 TET3O43151 1660 aa37.99■■■■□ 3.67
LSM7-201ENST00000252622 GCC2Q8IWJ2 1684 aa37.99■■■■□ 3.67
LSM7-201ENST00000252622 NAIPQ13075 1403 aa37.99■■■■□ 3.67
LSM7-201ENST00000252622 DMRT2Q9Y5R5 561 aa37.99■■■■□ 3.67
LSM7-201ENST00000252622 IQGAP3Q86VI3 1631 aa37.97■■■■□ 3.67
LSM7-201ENST00000252622 RPRD2Q5VT52 1461 aaKnown RBP37.96■■■■□ 3.67
LSM7-201ENST00000252622 UGGT1Q9NYU2 1555 aa37.96■■■■□ 3.67
LSM7-201ENST00000252622 HFM1A2PYH4 1435 aa37.95■■■■□ 3.67
LSM7-201ENST00000252622 CFAP65Q6ZU64 1925 aaKnown RBP37.95■■■■□ 3.67
LSM7-201ENST00000252622 PTPRTO14522 1441 aa37.95■■■■□ 3.67
LSM7-201ENST00000252622 NOS1P29475 1434 aa37.92■■■■□ 3.66
LSM7-201ENST00000252622 NUP155O75694 1391 aa37.91■■■■□ 3.66
LSM7-201ENST00000252622 PKD2Q13563 968 aa37.9■■■■□ 3.66
LSM7-201ENST00000252622 THEMISQ8N1K5 641 aaPredicted RBP37.88■■■■□ 3.65
LSM7-201ENST00000252622 SYNMO15061 1565 aa37.86■■■■□ 3.65
LSM7-201ENST00000252622 NCKAP5LQ9HCH0 1330 aa37.86■■■■□ 3.65
LSM7-201ENST00000252622 UBR1Q8IWV7 1749 aa37.84■■■■□ 3.65
LSM7-201ENST00000252622 E9PCH4 1651 aa37.81■■■■□ 3.64
LSM7-201ENST00000252622 POLR1AO95602 1720 aaPredicted RBP37.8■■■■□ 3.64
LSM7-201ENST00000252622 PIK3C2BO00750 1634 aa37.79■■■■□ 3.64
LSM7-201ENST00000252622 KDM5AP29375 1690 aaKnown RBP37.76■■■■□ 3.64
LSM7-201ENST00000252622 NEURL4Q96JN8 1562 aa37.76■■■■□ 3.63
LSM7-201ENST00000252622 SLC52A1Q9NWF4 448 aa37.75■■■■□ 3.63
LSM7-201ENST00000252622 ANKLE2Q86XL3 938 aa37.74■■■■□ 3.63
LSM7-201ENST00000252622 IDI1Q13907 227 aa37.73■■■■□ 3.63
LSM7-201ENST00000252622 SLIT1O75093 1534 aa37.71■■■■□ 3.63
LSM7-201ENST00000252622 ARHGAP23Q9P227 1491 aa37.71■■■■□ 3.63
LSM7-201ENST00000252622 ADGRB3O60242 1522 aa37.69■■■■□ 3.62
LSM7-201ENST00000252622 MED14O60244 1454 aa37.69■■■■□ 3.62
LSM7-201ENST00000252622 STAG3Q9UJ98 1225 aa37.65■■■■□ 3.62
LSM7-201ENST00000252622 NPHP4O75161 1426 aaPredicted RBP37.63■■■■□ 3.61
LSM7-201ENST00000252622 TMEM2Q9UHN6 1383 aa37.62■■■■□ 3.61
LSM7-201ENST00000252622 SCAF11Q99590 1463 aaKnown RBP37.62■■■■□ 3.61
LSM7-201ENST00000252622 TRIM52Q96A61 297 aa37.6■■■■□ 3.61
LSM7-201ENST00000252622 LTBP4Q8N2S1 1624 aa37.58■■■■□ 3.61
LSM7-201ENST00000252622 SPHKAPQ2M3C7 1700 aa37.58■■■■□ 3.61
LSM7-201ENST00000252622 IQGAP1P46940 1657 aa37.57■■■■□ 3.61
LSM7-201ENST00000252622 ILDR1Q86SU0 546 aaPredicted RBP37.57■■■■□ 3.6
LSM7-201ENST00000252622 CERKQ8TCT0 537 aa37.55■■■■□ 3.6
LSM7-201ENST00000252622 TMEM131LA2VDJ0 1609 aa37.54■■■■□ 3.6
LSM7-201ENST00000252622 SETD5Q9C0A6 1442 aa37.54■■■■□ 3.6
LSM7-201ENST00000252622 LTKP29376 864 aa37.53■■■■□ 3.6
LSM7-201ENST00000252622 TXNDC2Q86VQ3 553 aa37.53■■■■□ 3.6
LSM7-201ENST00000252622 EID1Q9Y6B2 187 aa37.53■■■■□ 3.6
LSM7-201ENST00000252622 ZNF335Q9H4Z2 1342 aaPredicted RBP37.51■■■■□ 3.6
LSM7-201ENST00000252622 ACIN1Q9UKV3 1341 aaKnown RBP37.51■■■■□ 3.6
LSM7-201ENST00000252622 SLC4A1APQ9BWU0 796 aaKnown RBP37.49■■■■□ 3.59
LSM7-201ENST00000252622 TRPM2O94759 1503 aa37.49■■■■□ 3.59
LSM7-201ENST00000252622 MYO5BQ9ULV0 1848 aa37.47■■■■□ 3.59
LSM7-201ENST00000252622 ZFYVE9O95405 1425 aa37.44■■■■□ 3.58
LSM7-201ENST00000252622 FBXO41Q8TF61 875 aa37.41■■■■□ 3.58
LSM7-201ENST00000252622 RAB3GAP2Q9H2M9 1393 aa37.41■■■■□ 3.58
LSM7-201ENST00000252622 IQSEC2Q5JU85 1478 aa37.4■■■■□ 3.58
LSM7-201ENST00000252622 CHGAP10645 457 aaKnown RBP37.4■■■■□ 3.58
LSM7-201ENST00000252622 RIMS2Q9UQ26 1411 aa37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms