RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 BCORL1Q5H9F3 1711 aa35■■■■□ 3.19
TMEM55B-201ENST00000250489 SPAG9O60271 1321 aaKnown RBP35■■■■□ 3.19
TMEM55B-201ENST00000250489 FANCAO15360 1455 aa34.98■■■■□ 3.19
TMEM55B-201ENST00000250489 DCAF11Q8TEB1 546 aa34.98■■■■□ 3.19
TMEM55B-201ENST00000250489 ASXL2Q76L83 1435 aa34.97■■■■□ 3.19
TMEM55B-201ENST00000250489 OSCARQ8IYS5 282 aa34.97■■■■□ 3.19
TMEM55B-201ENST00000250489 KDM2AQ9Y2K7 1162 aa34.96■■■■□ 3.19
TMEM55B-201ENST00000250489 ATP10AO60312 1499 aa34.96■■■■□ 3.19
TMEM55B-201ENST00000250489 AFAP1Q8N556 730 aa34.95■■■■□ 3.19
TMEM55B-201ENST00000250489 CARD11Q9BXL7 1154 aa34.92■■■■□ 3.18
TMEM55B-201ENST00000250489 INO80Q9ULG1 1556 aaPredicted RBP34.91■■■■□ 3.18
TMEM55B-201ENST00000250489 ARID4BQ4LE39 1312 aaPredicted RBP34.89■■■■□ 3.18
TMEM55B-201ENST00000250489 PRKRIP1Q9H875 184 aaPredicted RBP34.89■■■■□ 3.18
TMEM55B-201ENST00000250489 PRAG1Q86YV5 1406 aa34.88■■■■□ 3.17
TMEM55B-201ENST00000250489 ATP7AQ04656 1500 aa34.88■■■■□ 3.17
TMEM55B-201ENST00000250489 TRPM1Q7Z4N2 1603 aa34.86■■■■□ 3.17
TMEM55B-201ENST00000250489 ADGRL1O94910 1474 aa34.86■■■■□ 3.17
TMEM55B-201ENST00000250489 A2MP01023 1474 aa34.86■■■■□ 3.17
TMEM55B-201ENST00000250489 SUPT16HQ9Y5B9 1047 aaKnown RBP34.85■■■■□ 3.17
TMEM55B-201ENST00000250489 DEPDC5O75140 1603 aa34.84■■■■□ 3.17
TMEM55B-201ENST00000250489 SCAPERQ9BY12 1400 aa34.82■■■■□ 3.17
TMEM55B-201ENST00000250489 ROCK2O75116 1388 aaKnown RBP34.82■■■■□ 3.16
TMEM55B-201ENST00000250489 E9PCH4 1651 aa34.8■■■■□ 3.16
TMEM55B-201ENST00000250489 RGL3Q3MIN7 710 aa34.8■■■■□ 3.16
TMEM55B-201ENST00000250489 DHX29Q7Z478 1369 aaKnown RBP34.77■■■■□ 3.16
TMEM55B-201ENST00000250489 NPM1P06748 294 aaKnown RBP eCLIP34.76■■■■□ 3.15
TMEM55B-201ENST00000250489 ST20-MTHFSA0A0A6YYL1 179 aa34.74■■■■□ 3.15
TMEM55B-201ENST00000250489 CCDC184Q52MB2 194 aa34.74■■■■□ 3.15
TMEM55B-201ENST00000250489 GPRASP1Q5JY77 1395 aa34.73■■■■□ 3.15
TMEM55B-201ENST00000250489 LAMC1P11047 1609 aa34.72■■■■□ 3.15
TMEM55B-201ENST00000250489 EIF2AK4Q9P2K8 1649 aaKnown RBP34.72■■■■□ 3.15
TMEM55B-201ENST00000250489 VWDEQ8N2E2 1590 aa34.72■■■■□ 3.15
TMEM55B-201ENST00000250489 POLR3GLQ9BT43 218 aa34.71■■■■□ 3.15
TMEM55B-201ENST00000250489 TET3O43151 1660 aa34.71■■■■□ 3.15
TMEM55B-201ENST00000250489 TRPM2O94759 1503 aa34.71■■■■□ 3.15
TMEM55B-201ENST00000250489 HNRNPUQ00839 825 aaKnown RBP eCLIP34.68■■■■□ 3.14
TMEM55B-201ENST00000250489 SPHKAPQ2M3C7 1700 aa34.67■■■■□ 3.14
TMEM55B-201ENST00000250489 PTPRTO14522 1441 aa34.67■■■■□ 3.14
TMEM55B-201ENST00000250489 KIDINS220Q9ULH0 1771 aa34.65■■■■□ 3.14
TMEM55B-201ENST00000250489 KANK1Q14678 1352 aa34.65■■■■□ 3.14
TMEM55B-201ENST00000250489 PELP1Q8IZL8 1130 aaKnown RBP34.65■■■■□ 3.14
TMEM55B-201ENST00000250489 MRS2Q9HD23 443 aa34.65■■■■□ 3.14
TMEM55B-201ENST00000250489 PRDM15P57071 1507 aaPredicted RBP34.65■■■■□ 3.14
TMEM55B-201ENST00000250489 NBPF1Q3BBV0 1214 aa34.64■■■■□ 3.14
TMEM55B-201ENST00000250489 CFAP74Q9C0B2 1584 aa34.64■■■■□ 3.14
TMEM55B-201ENST00000250489 MROH1Q8NDA8 1641 aa34.63■■■■□ 3.13
TMEM55B-201ENST00000250489 MYT1LQ9UL68 1186 aa34.63■■■■□ 3.13
TMEM55B-201ENST00000250489 ZNF518AQ6AHZ1 1483 aa34.63■■■■□ 3.13
TMEM55B-201ENST00000250489 CEP152O94986 1710 aa34.62■■■■□ 3.13
TMEM55B-201ENST00000250489 CD109Q6YHK3 1445 aa34.6■■■■□ 3.13
TMEM55B-201ENST00000250489 KIF3BO15066 747 aa34.6■■■■□ 3.13
TMEM55B-201ENST00000250489 CLTCL1P53675 1640 aa34.59■■■■□ 3.13
TMEM55B-201ENST00000250489 RNF17Q9BXT8 1623 aaKnown RBP34.58■■■■□ 3.13
TMEM55B-201ENST00000250489 MADDQ8WXG6 1647 aa34.53■■■■□ 3.12
TMEM55B-201ENST00000250489 POGZQ7Z3K3 1410 aa34.53■■■■□ 3.12
TMEM55B-201ENST00000250489 FAM9BQ8IZU0 186 aa34.53■■■■□ 3.12
TMEM55B-201ENST00000250489 FKBP8Q14318 412 aa34.49■■■■□ 3.11
TMEM55B-201ENST00000250489 COL17A1Q9UMD9 1497 aaPredicted RBP34.48■■■■□ 3.11
TMEM55B-201ENST00000250489 EFCAB6Q5THR3 1501 aa34.47■■■■□ 3.11
TMEM55B-201ENST00000250489 MLH3Q9UHC1 1453 aa34.46■■■■□ 3.11
TMEM55B-201ENST00000250489 NEURL4Q96JN8 1562 aa34.46■■■■□ 3.11
TMEM55B-201ENST00000250489 STAC3Q96MF2 364 aa34.45■■■■□ 3.11
TMEM55B-201ENST00000250489 TESK2Q96S53 571 aa34.45■■■■□ 3.11
TMEM55B-201ENST00000250489 NEFLP07196 543 aa34.44■■■■□ 3.1
TMEM55B-201ENST00000250489 LMTK2Q8IWU2 1503 aa34.44■■■■□ 3.1
TMEM55B-201ENST00000250489 HECW2Q9P2P5 1572 aa34.43■■■■□ 3.1
TMEM55B-201ENST00000250489 PPRC1Q5VV67 1664 aaKnown RBP34.41■■■■□ 3.1
TMEM55B-201ENST00000250489 CNGB1Q14028 1251 aaPredicted RBP34.41■■■■□ 3.1
TMEM55B-201ENST00000250489 FRMPD1Q5SYB0 1578 aa34.4■■■■□ 3.1
TMEM55B-201ENST00000250489 NEO1Q92859 1461 aa34.4■■■■□ 3.1
TMEM55B-201ENST00000250489 KTN1Q86UP2 1357 aaKnown RBP34.39■■■■□ 3.1
TMEM55B-201ENST00000250489 DISP3Q9P2K9 1392 aa34.39■■■■□ 3.1
TMEM55B-201ENST00000250489 ZBED9Q6R2W3 1325 aa34.38■■■■□ 3.09
TMEM55B-201ENST00000250489 IQGAP1P46940 1657 aa34.38■■■■□ 3.09
TMEM55B-201ENST00000250489 UGGT1Q9NYU2 1555 aa34.35■■■■□ 3.09
TMEM55B-201ENST00000250489 ABCA6Q8N139 1617 aa34.34■■■■□ 3.09
TMEM55B-201ENST00000250489 RALBP1Q15311 655 aa34.32■■■■□ 3.09
TMEM55B-201ENST00000250489 TMF1P82094 1093 aa34.31■■■■□ 3.08
TMEM55B-201ENST00000250489 BCANQ96GW7 911 aa34.31■■■■□ 3.08
TMEM55B-201ENST00000250489 KIF1BO60333 1816 aa34.3■■■■□ 3.08
TMEM55B-201ENST00000250489 KIAA1210Q9ULL0 1709 aa34.3■■■■□ 3.08
TMEM55B-201ENST00000250489 MYBBP1AQ9BQG0 1328 aaKnown RBP34.28■■■■□ 3.08
TMEM55B-201ENST00000250489 MYOM2P54296 1465 aa34.27■■■■□ 3.08
TMEM55B-201ENST00000250489 SCAF11Q99590 1463 aaKnown RBP34.27■■■■□ 3.08
TMEM55B-201ENST00000250489 PER1O15534 1290 aaPredicted RBP34.26■■■■□ 3.08
TMEM55B-201ENST00000250489 MAP3K4Q9Y6R4 1608 aa34.26■■■■□ 3.07
TMEM55B-201ENST00000250489 BRD4O60885 1362 aaPredicted RBP34.25■■■■□ 3.07
TMEM55B-201ENST00000250489 PNISRQ8TF01 805 aaKnown RBP34.25■■■■□ 3.07
TMEM55B-201ENST00000250489 TMC1Q8TDI8 760 aa34.24■■■■□ 3.07
TMEM55B-201ENST00000250489 IFT172Q9UG01 1749 aa34.24■■■■□ 3.07
TMEM55B-201ENST00000250489 MROH2AA6NES4 1674 aa34.24■■■■□ 3.07
TMEM55B-201ENST00000250489 PARD3Q8TEW0 1356 aa34.24■■■■□ 3.07
TMEM55B-201ENST00000250489 NPATQ14207 1427 aa34.21■■■■□ 3.07
TMEM55B-201ENST00000250489 RAPGEF3O95398 923 aa34.2■■■■□ 3.07
TMEM55B-201ENST00000250489 DIP2CQ9Y2E4 1556 aa34.19■■■■□ 3.06
TMEM55B-201ENST00000250489 RICTORQ6R327 1708 aa34.19■■■■□ 3.06
TMEM55B-201ENST00000250489 ADGRB3O60242 1522 aa34.19■■■■□ 3.06
TMEM55B-201ENST00000250489 WASHC2CQ9Y4E1 1318 aa34.19■■■■□ 3.06
TMEM55B-201ENST00000250489 ABCC3O15438 1527 aa34.18■■■■□ 3.06
TMEM55B-201ENST00000250489 GGT6Q6P531 493 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms