RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.953e-6■■■■□ 20.1
DDX49-201ENST00000247003 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
DDX49-201ENST00000247003 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
DDX49-201ENST00000247003 FANCAO15360 1455 aa20.99■□□□□ 0.95
DDX49-201ENST00000247003 KIF7Q2M1P5 1343 aa20.97■□□□□ 0.95
DDX49-201ENST00000247003 ASXL2Q76L83 1435 aa20.96■□□□□ 0.95
DDX49-201ENST00000247003 C11orf95C9JLR9 678 aaPredicted RBP20.95■□□□□ 0.94
DDX49-201ENST00000247003 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
DDX49-201ENST00000247003 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
DDX49-201ENST00000247003 ARID4BQ4LE39 1312 aaPredicted RBP20.94■□□□□ 0.94
DDX49-201ENST00000247003 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
DDX49-201ENST00000247003 ATP7AQ04656 1500 aa20.93■□□□□ 0.94
DDX49-201ENST00000247003 ADGRL1O94910 1474 aa20.93■□□□□ 0.94
DDX49-201ENST00000247003 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
DDX49-201ENST00000247003 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
DDX49-201ENST00000247003 ATP10AO60312 1499 aa20.93■□□□□ 0.94
DDX49-201ENST00000247003 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
DDX49-201ENST00000247003 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
DDX49-201ENST00000247003 EIF2AK4Q9P2K8 1649 aaKnown RBP20.9■□□□□ 0.94
DDX49-201ENST00000247003 ROCK2O75116 1388 aaKnown RBP20.9■□□□□ 0.94
DDX49-201ENST00000247003 DEPDC5O75140 1603 aa20.9■□□□□ 0.94
DDX49-201ENST00000247003 PLA2R1Q13018 1463 aa20.9■□□□□ 0.94
DDX49-201ENST00000247003 CFAP74Q9C0B2 1584 aa20.89■□□□□ 0.93
DDX49-201ENST00000247003 PRAG1Q86YV5 1406 aa20.88■□□□□ 0.93
DDX49-201ENST00000247003 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
DDX49-201ENST00000247003 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
DDX49-201ENST00000247003 PRKRIP1Q9H875 184 aaPredicted RBP20.87■□□□□ 0.93
DDX49-201ENST00000247003 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
DDX49-201ENST00000247003 MYT1LQ9UL68 1186 aa20.86■□□□□ 0.93
DDX49-201ENST00000247003 KANK1Q14678 1352 aa20.86■□□□□ 0.93
DDX49-201ENST00000247003 A2MP01023 1474 aa20.86■□□□□ 0.93
DDX49-201ENST00000247003 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
DDX49-201ENST00000247003 E9PCH4 1651 aa20.85■□□□□ 0.93
DDX49-201ENST00000247003 LAMC1P11047 1609 aa20.85■□□□□ 0.93
DDX49-201ENST00000247003 TET3O43151 1660 aa20.84■□□□□ 0.93
DDX49-201ENST00000247003 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
DDX49-201ENST00000247003 RGL3Q3MIN7 710 aa20.83■□□□□ 0.93
DDX49-201ENST00000247003 SPHKAPQ2M3C7 1700 aa20.83■□□□□ 0.92
DDX49-201ENST00000247003 TRPM2O94759 1503 aa20.82■□□□□ 0.92
DDX49-201ENST00000247003 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
DDX49-201ENST00000247003 ZNF518AQ6AHZ1 1483 aa20.81■□□□□ 0.92
DDX49-201ENST00000247003 CEP152O94986 1710 aa20.8■□□□□ 0.92
DDX49-201ENST00000247003 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
DDX49-201ENST00000247003 PRDM15P57071 1507 aaPredicted RBP20.79■□□□□ 0.92
DDX49-201ENST00000247003 ST20-MTHFSA0A0A6YYL1 179 aa20.78■□□□□ 0.92
DDX49-201ENST00000247003 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
DDX49-201ENST00000247003 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
DDX49-201ENST00000247003 MRS2Q9HD23 443 aa20.77■□□□□ 0.92
DDX49-201ENST00000247003 DHX29Q7Z478 1369 aaKnown RBP20.77■□□□□ 0.92
DDX49-201ENST00000247003 NEFLP07196 543 aa20.76■□□□□ 0.91
DDX49-201ENST00000247003 KIDINS220Q9ULH0 1771 aa20.76■□□□□ 0.91
DDX49-201ENST00000247003 CD109Q6YHK3 1445 aa20.75■□□□□ 0.91
DDX49-201ENST00000247003 RNF17Q9BXT8 1623 aaKnown RBP20.74■□□□□ 0.91
DDX49-201ENST00000247003 KIF3BO15066 747 aa20.74■□□□□ 0.91
DDX49-201ENST00000247003 PTPRTO14522 1441 aa20.73■□□□□ 0.91
DDX49-201ENST00000247003 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
DDX49-201ENST00000247003 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
DDX49-201ENST00000247003 POGZQ7Z3K3 1410 aa20.71■□□□□ 0.91
DDX49-201ENST00000247003 STAC3Q96MF2 364 aa20.7■□□□□ 0.9
DDX49-201ENST00000247003 HECW2Q9P2P5 1572 aa20.7■□□□□ 0.9
DDX49-201ENST00000247003 MADDQ8WXG6 1647 aa20.7■□□□□ 0.9
DDX49-201ENST00000247003 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
DDX49-201ENST00000247003 NEURL4Q96JN8 1562 aa20.68■□□□□ 0.9
DDX49-201ENST00000247003 FAM9BQ8IZU0 186 aa20.68■□□□□ 0.9
DDX49-201ENST00000247003 NBPF1Q3BBV0 1214 aa20.67■□□□□ 0.9
DDX49-201ENST00000247003 CCDC184Q52MB2 194 aa20.67■□□□□ 0.9
DDX49-201ENST00000247003 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
DDX49-201ENST00000247003 COL17A1Q9UMD9 1497 aaPredicted RBP20.67■□□□□ 0.9
DDX49-201ENST00000247003 MLH3Q9UHC1 1453 aa20.66■□□□□ 0.9
DDX49-201ENST00000247003 NEO1Q92859 1461 aa20.65■□□□□ 0.9
DDX49-201ENST00000247003 LMTK2Q8IWU2 1503 aa20.65■□□□□ 0.9
DDX49-201ENST00000247003 FKBP8Q14318 412 aa20.64■□□□□ 0.9
DDX49-201ENST00000247003 KIF1BO60333 1816 aa20.63■□□□□ 0.89
DDX49-201ENST00000247003 PPRC1Q5VV67 1664 aaKnown RBP20.62■□□□□ 0.89
DDX49-201ENST00000247003 IQGAP1P46940 1657 aa20.62■□□□□ 0.89
DDX49-201ENST00000247003 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
DDX49-201ENST00000247003 TMF1P82094 1093 aa20.6■□□□□ 0.89
DDX49-201ENST00000247003 KIAA1210Q9ULL0 1709 aa20.6■□□□□ 0.89
DDX49-201ENST00000247003 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
DDX49-201ENST00000247003 ABCA6Q8N139 1617 aa20.59■□□□□ 0.89
DDX49-201ENST00000247003 RALBP1Q15311 655 aa20.59■□□□□ 0.89
DDX49-201ENST00000247003 FRMPD1Q5SYB0 1578 aa20.58■□□□□ 0.88
DDX49-201ENST00000247003 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
DDX49-201ENST00000247003 MYOM2P54296 1465 aa20.56■□□□□ 0.88
DDX49-201ENST00000247003 GLI2P10070 1586 aa20.56■□□□□ 0.88
DDX49-201ENST00000247003 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
DDX49-201ENST00000247003 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
DDX49-201ENST00000247003 EIF3AQ14152 1382 aaKnown RBP20.56■□□□□ 0.88
DDX49-201ENST00000247003 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
DDX49-201ENST00000247003 TMC1Q8TDI8 760 aa20.55■□□□□ 0.88
DDX49-201ENST00000247003 TESK2Q96S53 571 aa20.55■□□□□ 0.88
DDX49-201ENST00000247003 UGGT1Q9NYU2 1555 aa20.54■□□□□ 0.88
DDX49-201ENST00000247003 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
DDX49-201ENST00000247003 DIP2BQ9P265 1576 aa20.54■□□□□ 0.88
DDX49-201ENST00000247003 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
DDX49-201ENST00000247003 BCANQ96GW7 911 aa20.53■□□□□ 0.88
DDX49-201ENST00000247003 MROH2AA6NES4 1674 aa20.52■□□□□ 0.87
DDX49-201ENST00000247003 RICTORQ6R327 1708 aa20.51■□□□□ 0.87
DDX49-201ENST00000247003 WASHC2CQ9Y4E1 1318 aa20.5■□□□□ 0.87
DDX49-201ENST00000247003 DIP2CQ9Y2E4 1556 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms