RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 INO80Q9ULG1 1556 aaPredicted RBP20■□□□□ 0.79
PDZD11-201ENST00000239666 A2MP01023 1474 aa19.99■□□□□ 0.79
PDZD11-201ENST00000239666 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
PDZD11-201ENST00000239666 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
PDZD11-201ENST00000239666 MBD5Q9P267 1494 aa19.97■□□□□ 0.79
PDZD11-201ENST00000239666 CEBPAP49715 358 aaPredicted RBP19.96■□□□□ 0.79
PDZD11-201ENST00000239666 CCDC141Q6ZP82 1450 aa19.96■□□□□ 0.79
PDZD11-201ENST00000239666 MROH2AA6NES4 1674 aa19.96■□□□□ 0.79
PDZD11-201ENST00000239666 ZNF644Q9H582 1327 aaPredicted RBP19.95■□□□□ 0.78
PDZD11-201ENST00000239666 C3P01024 1663 aa19.94■□□□□ 0.78
PDZD11-201ENST00000239666 NPATQ14207 1427 aa19.93■□□□□ 0.78
PDZD11-201ENST00000239666 PLXNC1O60486 1568 aa19.93■□□□□ 0.78
PDZD11-201ENST00000239666 HSPA2P54652 639 aa19.93■□□□□ 0.78
PDZD11-201ENST00000239666 DHX29Q7Z478 1369 aaKnown RBP19.93■□□□□ 0.78
PDZD11-201ENST00000239666 MIA2Q96PC5 1412 aa19.93■□□□□ 0.78
PDZD11-201ENST00000239666 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
PDZD11-201ENST00000239666 ILDR1Q86SU0 546 aaPredicted RBP19.92■□□□□ 0.78
PDZD11-201ENST00000239666 ZMYM3Q14202 1370 aa19.92■□□□□ 0.78
PDZD11-201ENST00000239666 GGT6Q6P531 493 aa19.91■□□□□ 0.78
PDZD11-201ENST00000239666 ARHGEF5Q12774 1597 aa19.91■□□□□ 0.78
PDZD11-201ENST00000239666 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
PDZD11-201ENST00000239666 FBXO41Q8TF61 875 aa19.88■□□□□ 0.77
PDZD11-201ENST00000239666 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
PDZD11-201ENST00000239666 KIF3BO15066 747 aa19.84■□□□□ 0.77
PDZD11-201ENST00000239666 POLA2Q14181 598 aa19.84■□□□□ 0.77
PDZD11-201ENST00000239666 KANK4Q5T7N3 995 aaPredicted RBP19.83■□□□□ 0.77
PDZD11-201ENST00000239666 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
PDZD11-201ENST00000239666 WASHC2CQ9Y4E1 1318 aa19.8■□□□□ 0.76
PDZD11-201ENST00000239666 MAST1Q9Y2H9 1570 aa19.8■□□□□ 0.76
PDZD11-201ENST00000239666 ABCB7O75027 752 aa19.8■□□□□ 0.76
PDZD11-201ENST00000239666 PTPRTO14522 1441 aa19.79■□□□□ 0.76
PDZD11-201ENST00000239666 KDM5DQ9BY66 1539 aa19.76■□□□□ 0.75
PDZD11-201ENST00000239666 PTPRKQ15262 1439 aa19.76■□□□□ 0.75
PDZD11-201ENST00000239666 PKD2Q13563 968 aa19.75■□□□□ 0.75
PDZD11-201ENST00000239666 CERKQ8TCT0 537 aa19.75■□□□□ 0.75
PDZD11-201ENST00000239666 STRCQ7RTU9 1775 aa19.75■□□□□ 0.75
PDZD11-201ENST00000239666 DSG3P32926 999 aa19.74■□□□□ 0.75
PDZD11-201ENST00000239666 EIF2AK4Q9P2K8 1649 aaKnown RBP19.73■□□□□ 0.75
PDZD11-201ENST00000239666 SHANK2Q9UPX8 1470 aa19.72■□□□□ 0.75
PDZD11-201ENST00000239666 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
PDZD11-201ENST00000239666 NCOA1Q15788 1441 aa19.71■□□□□ 0.75
PDZD11-201ENST00000239666 PLA2R1Q13018 1463 aa19.71■□□□□ 0.75
PDZD11-201ENST00000239666 ZNF142P52746 1687 aaPredicted RBP19.71■□□□□ 0.75
PDZD11-201ENST00000239666 PZPP20742 1482 aa19.7■□□□□ 0.74
PDZD11-201ENST00000239666 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
PDZD11-201ENST00000239666 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
PDZD11-201ENST00000239666 ZC3H13Q5T200 1668 aaKnown RBP19.69■□□□□ 0.74
PDZD11-201ENST00000239666 CEP170BQ9Y4F5 1589 aaPredicted RBP19.69■□□□□ 0.74
PDZD11-201ENST00000239666 MYO3AQ8NEV4 1616 aa19.69■□□□□ 0.74
PDZD11-201ENST00000239666 TNRQ92752 1358 aa19.68■□□□□ 0.74
PDZD11-201ENST00000239666 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
PDZD11-201ENST00000239666 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
PDZD11-201ENST00000239666 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
PDZD11-201ENST00000239666 THEMISQ8N1K5 641 aaPredicted RBP19.67■□□□□ 0.74
PDZD11-201ENST00000239666 ANKRD30AQ9BXX3 1397 aa19.66■□□□□ 0.74
PDZD11-201ENST00000239666 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
PDZD11-201ENST00000239666 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
PDZD11-201ENST00000239666 NLRP1Q9C000 1473 aa19.65■□□□□ 0.74
PDZD11-201ENST00000239666 KANK1Q14678 1352 aa19.64■□□□□ 0.73
PDZD11-201ENST00000239666 KIF15Q9NS87 1388 aa19.64■□□□□ 0.73
PDZD11-201ENST00000239666 DNMT1P26358 1616 aaKnown RBP19.63■□□□□ 0.73
PDZD11-201ENST00000239666 ABCC5O15440 1437 aa19.63■□□□□ 0.73
PDZD11-201ENST00000239666 DAPK1P53355 1430 aa19.63■□□□□ 0.73
PDZD11-201ENST00000239666 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
PDZD11-201ENST00000239666 IQSEC2Q5JU85 1478 aa19.61■□□□□ 0.73
PDZD11-201ENST00000239666 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
PDZD11-201ENST00000239666 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
PDZD11-201ENST00000239666 ANKLE2Q86XL3 938 aa19.6■□□□□ 0.73
PDZD11-201ENST00000239666 NCKAP5LQ9HCH0 1330 aa19.58■□□□□ 0.73
PDZD11-201ENST00000239666 ABCC3O15438 1527 aa19.58■□□□□ 0.73
PDZD11-201ENST00000239666 ARHGAP31Q2M1Z3 1444 aa19.57■□□□□ 0.72
PDZD11-201ENST00000239666 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
PDZD11-201ENST00000239666 UGGT1Q9NYU2 1555 aa19.55■□□□□ 0.72
PDZD11-201ENST00000239666 ZBTB12Q9Y330 459 aaPredicted RBP19.55■□□□□ 0.72
PDZD11-201ENST00000239666 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
PDZD11-201ENST00000239666 PRDM15P57071 1507 aaPredicted RBP19.54■□□□□ 0.72
PDZD11-201ENST00000239666 CHIC2Q9UKJ5 165 aa19.52■□□□□ 0.72
PDZD11-201ENST00000239666 ADGRL2O95490 1459 aa19.52■□□□□ 0.72
PDZD11-201ENST00000239666 POLR1AO95602 1720 aaPredicted RBP19.51■□□□□ 0.71
PDZD11-201ENST00000239666 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
PDZD11-201ENST00000239666 LTBP4Q8N2S1 1624 aa19.51■□□□□ 0.71
PDZD11-201ENST00000239666 ERVK-7P63135 1459 aa19.5■□□□□ 0.71
PDZD11-201ENST00000239666 MROH1Q8NDA8 1641 aa19.5■□□□□ 0.71
PDZD11-201ENST00000239666 CEP152O94986 1710 aa19.49■□□□□ 0.71
PDZD11-201ENST00000239666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDZD11-201ENST00000239666 MED14O60244 1454 aa19.47■□□□□ 0.71
PDZD11-201ENST00000239666 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
PDZD11-201ENST00000239666 LMTK2Q8IWU2 1503 aa19.46■□□□□ 0.71
PDZD11-201ENST00000239666 STAG3Q9UJ98 1225 aa19.46■□□□□ 0.71
PDZD11-201ENST00000239666 EID1Q9Y6B2 187 aa19.46■□□□□ 0.71
PDZD11-201ENST00000239666 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
PDZD11-201ENST00000239666 MKRN4PQ13434 485 aaPredicted RBP19.45■□□□□ 0.7
PDZD11-201ENST00000239666 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
PDZD11-201ENST00000239666 SLC52A1Q9NWF4 448 aa19.44■□□□□ 0.7
PDZD11-201ENST00000239666 CPS1P31327 1500 aa19.44■□□□□ 0.7
PDZD11-201ENST00000239666 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
PDZD11-201ENST00000239666 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
PDZD11-201ENST00000239666 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
PDZD11-201ENST00000239666 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
PDZD11-201ENST00000239666 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms