RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
IFT43-201ENST00000238628 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
IFT43-201ENST00000238628 SYNMO15061 1565 aa13.72□□□□□ -0.21
IFT43-201ENST00000238628 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
IFT43-201ENST00000238628 A2MP01023 1474 aa13.72□□□□□ -0.21
IFT43-201ENST00000238628 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
IFT43-201ENST00000238628 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
IFT43-201ENST00000238628 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.22
IFT43-201ENST00000238628 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
IFT43-201ENST00000238628 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
IFT43-201ENST00000238628 PREX2Q70Z35 1606 aa13.68□□□□□ -0.22
IFT43-201ENST00000238628 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
IFT43-201ENST00000238628 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
IFT43-201ENST00000238628 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
IFT43-201ENST00000238628 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
IFT43-201ENST00000238628 ATP7AQ04656 1500 aa13.66□□□□□ -0.22
IFT43-201ENST00000238628 RXRBP28702 533 aa13.66□□□□□ -0.22
IFT43-201ENST00000238628 MEX3CQ5U5Q3 659 aaKnown RBP13.66□□□□□ -0.22
IFT43-201ENST00000238628 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
IFT43-201ENST00000238628 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
IFT43-201ENST00000238628 JCADQ9P266 1359 aa13.64□□□□□ -0.23
IFT43-201ENST00000238628 MSH5O43196 834 aa13.64□□□□□ -0.23
IFT43-201ENST00000238628 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
IFT43-201ENST00000238628 PZPP20742 1482 aa13.63□□□□□ -0.23
IFT43-201ENST00000238628 SRCAPQ6ZRS2 3230 aa13.63□□□□□ -0.23
IFT43-201ENST00000238628 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
IFT43-201ENST00000238628 ROBO1Q9Y6N7 1651 aa13.61□□□□□ -0.23
IFT43-201ENST00000238628 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
IFT43-201ENST00000238628 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
IFT43-201ENST00000238628 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
IFT43-201ENST00000238628 KIF3BO15066 747 aa13.59□□□□□ -0.23
IFT43-201ENST00000238628 CCDC18Q5T9S5 1454 aa13.59□□□□□ -0.23
IFT43-201ENST00000238628 INO80Q9ULG1 1556 aaPredicted RBP13.58□□□□□ -0.23
IFT43-201ENST00000238628 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
IFT43-201ENST00000238628 KDM5DQ9BY66 1539 aa13.58□□□□□ -0.24
IFT43-201ENST00000238628 TMEM94Q12767 1356 aa13.58□□□□□ -0.24
IFT43-201ENST00000238628 SPATA31A6Q5VVP1 1343 aa13.57□□□□□ -0.24
IFT43-201ENST00000238628 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
IFT43-201ENST00000238628 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
IFT43-201ENST00000238628 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
IFT43-201ENST00000238628 ADGBQ8N7X0 1667 aa13.56□□□□□ -0.24
IFT43-201ENST00000238628 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
IFT43-201ENST00000238628 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
IFT43-201ENST00000238628 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
IFT43-201ENST00000238628 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
IFT43-201ENST00000238628 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
IFT43-201ENST00000238628 LRRC9Q6ZRR7 1453 aa13.55□□□□□ -0.24
IFT43-201ENST00000238628 PLEKHH2Q8IVE3 1493 aa13.55□□□□□ -0.24
IFT43-201ENST00000238628 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
IFT43-201ENST00000238628 LRP6O75581 1613 aa13.54□□□□□ -0.24
IFT43-201ENST00000238628 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
IFT43-201ENST00000238628 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
IFT43-201ENST00000238628 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
IFT43-201ENST00000238628 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
IFT43-201ENST00000238628 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
IFT43-201ENST00000238628 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
IFT43-201ENST00000238628 LTKP29376 864 aa13.53□□□□□ -0.24
IFT43-201ENST00000238628 GPATCH8Q9UKJ3 1502 aaKnown RBP13.52□□□□□ -0.25
IFT43-201ENST00000238628 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
IFT43-201ENST00000238628 KCNA6P17658 529 aa13.5□□□□□ -0.25
IFT43-201ENST00000238628 FYCO1Q9BQS8 1478 aa13.49□□□□□ -0.25
IFT43-201ENST00000238628 MSH6P52701 1360 aa13.49□□□□□ -0.25
IFT43-201ENST00000238628 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
IFT43-201ENST00000238628 SETBP1Q9Y6X0 1596 aa13.48□□□□□ -0.25
IFT43-201ENST00000238628 CCNB3Q8WWL7 1395 aa13.47□□□□□ -0.25
IFT43-201ENST00000238628 AFF2P51816 1311 aa13.47□□□□□ -0.25
IFT43-201ENST00000238628 MAP3K1Q13233 1512 aa13.46□□□□□ -0.25
IFT43-201ENST00000238628 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
IFT43-201ENST00000238628 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.26
IFT43-201ENST00000238628 RGS12O14924 1447 aa13.46□□□□□ -0.26
IFT43-201ENST00000238628 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
IFT43-201ENST00000238628 COL16A1Q07092 1604 aaPredicted RBP13.45□□□□□ -0.26
IFT43-201ENST00000238628 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
IFT43-201ENST00000238628 ATAD2Q6PL18 1390 aa13.44□□□□□ -0.26
IFT43-201ENST00000238628 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
IFT43-201ENST00000238628 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
IFT43-201ENST00000238628 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
IFT43-201ENST00000238628 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
IFT43-201ENST00000238628 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
IFT43-201ENST00000238628 SLIT1O75093 1534 aa13.42□□□□□ -0.26
IFT43-201ENST00000238628 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
IFT43-201ENST00000238628 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
IFT43-201ENST00000238628 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
IFT43-201ENST00000238628 NGLY1Q96IV0 654 aa13.4□□□□□ -0.26
IFT43-201ENST00000238628 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
IFT43-201ENST00000238628 CFAP65Q6ZU64 1925 aaKnown RBP13.4□□□□□ -0.26
IFT43-201ENST00000238628 MBD5Q9P267 1494 aa13.4□□□□□ -0.26
IFT43-201ENST00000238628 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
IFT43-201ENST00000238628 SHPRHQ149N8 1683 aa13.38□□□□□ -0.27
IFT43-201ENST00000238628 BCANQ96GW7 911 aa13.38□□□□□ -0.27
IFT43-201ENST00000238628 TMEM2Q9UHN6 1383 aa13.37□□□□□ -0.27
IFT43-201ENST00000238628 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
IFT43-201ENST00000238628 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
IFT43-201ENST00000238628 ABCC3O15438 1527 aa13.36□□□□□ -0.27
IFT43-201ENST00000238628 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
IFT43-201ENST00000238628 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
IFT43-201ENST00000238628 AHDC1Q5TGY3 1603 aaPredicted RBP13.33□□□□□ -0.28
IFT43-201ENST00000238628 CADPS2Q86UW7 1296 aa13.33□□□□□ -0.28
IFT43-201ENST00000238628 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
IFT43-201ENST00000238628 ATF3P18847 181 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms