RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 RRBP1Q9P2E9 1410 aaKnown RBP21.22■□□□□ 0.99
VEGFA-201ENST00000230480 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
VEGFA-201ENST00000230480 DUOX2Q9NRD8 1548 aa21.22■□□□□ 0.99
VEGFA-201ENST00000230480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.22■□□□□ 0.993e-7■■■□□ 14.6
VEGFA-201ENST00000230480 EIF2AK4Q9P2K8 1649 aaKnown RBP21.2■□□□□ 0.98
VEGFA-201ENST00000230480 CNTLNQ9NXG0 1405 aa21.2■□□□□ 0.98
VEGFA-201ENST00000230480 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
VEGFA-201ENST00000230480 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
VEGFA-201ENST00000230480 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
VEGFA-201ENST00000230480 ERBINQ96RT1 1412 aa21.14■□□□□ 0.98
VEGFA-201ENST00000230480 ABCC3O15438 1527 aa21.14■□□□□ 0.97
VEGFA-201ENST00000230480 KDM5DQ9BY66 1539 aa21.14■□□□□ 0.97
VEGFA-201ENST00000230480 FBXO31Q5XUX0 539 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-201ENST00000230480 PREX1Q8TCU6 1659 aa21.12■□□□□ 0.97
VEGFA-201ENST00000230480 VWDEQ8N2E2 1590 aa21.11■□□□□ 0.97
VEGFA-201ENST00000230480 HSPA2P54652 639 aa21.11■□□□□ 0.97
VEGFA-201ENST00000230480 ROCK1Q13464 1354 aa21.1■□□□□ 0.97
VEGFA-201ENST00000230480 PRDM15P57071 1507 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-201ENST00000230480 FAM135AQ9P2D6 1515 aa21.1■□□□□ 0.97
VEGFA-201ENST00000230480 CEP152O94986 1710 aa21.1■□□□□ 0.97
VEGFA-201ENST00000230480 NPATQ14207 1427 aa21.09■□□□□ 0.97
VEGFA-201ENST00000230480 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.97
VEGFA-201ENST00000230480 WASHC2CQ9Y4E1 1318 aa21.07■□□□□ 0.96
VEGFA-201ENST00000230480 ANKRD50Q9ULJ7 1429 aa21.07■□□□□ 0.96
VEGFA-201ENST00000230480 ITGAEP38570 1179 aa21.07■□□□□ 0.96
VEGFA-201ENST00000230480 PZPP20742 1482 aa21.07■□□□□ 0.96
VEGFA-201ENST00000230480 CFAP65Q6ZU64 1925 aaKnown RBP21.06■□□□□ 0.96
VEGFA-201ENST00000230480 ZC3H13Q5T200 1668 aaKnown RBP21.04■□□□□ 0.96
VEGFA-201ENST00000230480 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
VEGFA-201ENST00000230480 STRCQ7RTU9 1775 aa21.03■□□□□ 0.96
VEGFA-201ENST00000230480 LMTK2Q8IWU2 1503 aa21.02■□□□□ 0.96
VEGFA-201ENST00000230480 MYO3AQ8NEV4 1616 aa21.01■□□□□ 0.95
VEGFA-201ENST00000230480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.951e-14■■■□□ 16.5
VEGFA-201ENST00000230480 UHRF1BP1Q6BDS2 1440 aa21■□□□□ 0.95
VEGFA-201ENST00000230480 UNC13BO14795 1591 aa20.99■□□□□ 0.95
VEGFA-201ENST00000230480 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
VEGFA-201ENST00000230480 ARHGAP31Q2M1Z3 1444 aa20.99■□□□□ 0.95
VEGFA-201ENST00000230480 ZNF142P52746 1687 aaPredicted RBP20.99■□□□□ 0.95
VEGFA-201ENST00000230480 NAIPQ13075 1403 aa20.98■□□□□ 0.95
VEGFA-201ENST00000230480 ERVK-7P63135 1459 aa20.96■□□□□ 0.95
VEGFA-201ENST00000230480 TNRQ92752 1358 aa20.96■□□□□ 0.95
VEGFA-201ENST00000230480 CEP170BQ9Y4F5 1589 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-201ENST00000230480 A2ML1A8K2U0 1454 aa20.92■□□□□ 0.94
VEGFA-201ENST00000230480 GCC2Q8IWJ2 1684 aa20.92■□□□□ 0.94
VEGFA-201ENST00000230480 EFCAB6Q5THR3 1501 aa20.91■□□□□ 0.94
VEGFA-201ENST00000230480 HFM1A2PYH4 1435 aa20.9■□□□□ 0.94
VEGFA-201ENST00000230480 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.94
VEGFA-201ENST00000230480 SYNMO15061 1565 aa20.89■□□□□ 0.94
VEGFA-201ENST00000230480 NOS1P29475 1434 aa20.89■□□□□ 0.94
VEGFA-201ENST00000230480 TET3O43151 1660 aa20.89■□□□□ 0.93
VEGFA-201ENST00000230480 KANK1Q14678 1352 aa20.87■□□□□ 0.93
VEGFA-201ENST00000230480 E9PCH4 1651 aa20.87■□□□□ 0.93
VEGFA-201ENST00000230480 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
VEGFA-201ENST00000230480 ILDR1Q86SU0 546 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-201ENST00000230480 NUP155O75694 1391 aa20.84■□□□□ 0.93
VEGFA-201ENST00000230480 NCKAP5LQ9HCH0 1330 aa20.83■□□□□ 0.93
VEGFA-201ENST00000230480 PLA2R1Q13018 1463 aa20.83■□□□□ 0.93
VEGFA-201ENST00000230480 UBR1Q8IWV7 1749 aa20.83■□□□□ 0.92
VEGFA-201ENST00000230480 IDI1Q13907 227 aa20.82■□□□□ 0.92
VEGFA-201ENST00000230480 PIK3C2BO00750 1634 aa20.81■□□□□ 0.92
VEGFA-201ENST00000230480 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
VEGFA-201ENST00000230480 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
VEGFA-201ENST00000230480 RPRD2Q5VT52 1461 aaKnown RBP20.8■□□□□ 0.92
VEGFA-201ENST00000230480 PTPRTO14522 1441 aa20.78■□□□□ 0.92
VEGFA-201ENST00000230480 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
VEGFA-201ENST00000230480 MYO5BQ9ULV0 1848 aa20.75■□□□□ 0.91
VEGFA-201ENST00000230480 LTKP29376 864 aa20.73■□□□□ 0.91
VEGFA-201ENST00000230480 THEMISQ8N1K5 641 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-201ENST00000230480 POLR1AO95602 1720 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-201ENST00000230480 PKD2Q13563 968 aa20.72■□□□□ 0.91
VEGFA-201ENST00000230480 KDM5AP29375 1690 aaKnown RBP20.72■□□□□ 0.91
VEGFA-201ENST00000230480 SLIT1O75093 1534 aa20.72■□□□□ 0.91
VEGFA-201ENST00000230480 MED14O60244 1454 aa20.7■□□□□ 0.9
VEGFA-201ENST00000230480 TMEM131LA2VDJ0 1609 aa20.7■□□□□ 0.9
VEGFA-201ENST00000230480 LTBP4Q8N2S1 1624 aa20.7■□□□□ 0.9
VEGFA-201ENST00000230480 SLC52A1Q9NWF4 448 aa20.69■□□□□ 0.9
VEGFA-201ENST00000230480 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
VEGFA-201ENST00000230480 DMRT2Q9Y5R5 561 aa20.68■□□□□ 0.9
VEGFA-201ENST00000230480 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
VEGFA-201ENST00000230480 TMEM2Q9UHN6 1383 aa20.67■□□□□ 0.9
VEGFA-201ENST00000230480 ADGRB3O60242 1522 aa20.67■□□□□ 0.9
VEGFA-201ENST00000230480 ANKLE2Q86XL3 938 aa20.66■□□□□ 0.9
VEGFA-201ENST00000230480 FBXO41Q8TF61 875 aa20.66■□□□□ 0.9
VEGFA-201ENST00000230480 RAB3GAP2Q9H2M9 1393 aa20.64■□□□□ 0.89
VEGFA-201ENST00000230480 TRIM52Q96A61 297 aa20.64■□□□□ 0.89
VEGFA-201ENST00000230480 ZFYVE9O95405 1425 aa20.63■□□□□ 0.89
VEGFA-201ENST00000230480 ZNF335Q9H4Z2 1342 aaPredicted RBP20.63■□□□□ 0.89
VEGFA-201ENST00000230480 FOXD1Q16676 465 aa20.63■□□□□ 0.89
VEGFA-201ENST00000230480 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
VEGFA-201ENST00000230480 NPHP4O75161 1426 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-201ENST00000230480 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
VEGFA-201ENST00000230480 TXNDC2Q86VQ3 553 aa20.61■□□□□ 0.89
VEGFA-201ENST00000230480 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
VEGFA-201ENST00000230480 IQGAP1P46940 1657 aa20.61■□□□□ 0.89
VEGFA-201ENST00000230480 TRPM2O94759 1503 aa20.6■□□□□ 0.89
VEGFA-201ENST00000230480 MPHOSPH9Q99550 1183 aa20.6■□□□□ 0.89
VEGFA-201ENST00000230480 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
VEGFA-201ENST00000230480 CERKQ8TCT0 537 aa20.58■□□□□ 0.89
VEGFA-201ENST00000230480 RIMS2Q9UQ26 1411 aa20.54■□□□□ 0.88
VEGFA-201ENST00000230480 HRCP23327 699 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms