RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 GZF1Q9H116 711 aaPredicted RBP18.76■□□□□ 0.59
SFXN3-201ENST00000224807 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
SFXN3-201ENST00000224807 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
SFXN3-201ENST00000224807 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
SFXN3-201ENST00000224807 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
SFXN3-201ENST00000224807 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
SFXN3-201ENST00000224807 LRPPRCP42704 1394 aaKnown RBP18.74■□□□□ 0.59
SFXN3-201ENST00000224807 MS4A1P11836 297 aa18.72■□□□□ 0.59
SFXN3-201ENST00000224807 POGKQ9P215 609 aa18.72■□□□□ 0.59
SFXN3-201ENST00000224807 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
SFXN3-201ENST00000224807 CAMSAP2Q08AD1 1489 aa18.72■□□□□ 0.59
SFXN3-201ENST00000224807 NUP155O75694 1391 aa18.71■□□□□ 0.59
SFXN3-201ENST00000224807 PANK3Q9H999 370 aa18.71■□□□□ 0.59
SFXN3-201ENST00000224807 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
SFXN3-201ENST00000224807 RALBP1Q15311 655 aa18.71■□□□□ 0.59
SFXN3-201ENST00000224807 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
SFXN3-201ENST00000224807 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
SFXN3-201ENST00000224807 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
SFXN3-201ENST00000224807 KTN1Q86UP2 1357 aaKnown RBP18.7■□□□□ 0.58
SFXN3-201ENST00000224807 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
SFXN3-201ENST00000224807 ADGBQ8N7X0 1667 aa18.69■□□□□ 0.58
SFXN3-201ENST00000224807 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
SFXN3-201ENST00000224807 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
SFXN3-201ENST00000224807 KIAA0556O60303 1618 aa18.68■□□□□ 0.58
SFXN3-201ENST00000224807 UHRF1BP1Q6BDS2 1440 aa18.68■□□□□ 0.58
SFXN3-201ENST00000224807 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
SFXN3-201ENST00000224807 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
SFXN3-201ENST00000224807 RAPGEF6Q8TEU7 1601 aa18.67■□□□□ 0.58
SFXN3-201ENST00000224807 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
SFXN3-201ENST00000224807 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
SFXN3-201ENST00000224807 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
SFXN3-201ENST00000224807 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
SFXN3-201ENST00000224807 BCAR3O75815 825 aa18.63■□□□□ 0.57
SFXN3-201ENST00000224807 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
SFXN3-201ENST00000224807 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
SFXN3-201ENST00000224807 NAP1L5Q96NT1 182 aaPredicted RBP18.63■□□□□ 0.57
SFXN3-201ENST00000224807 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
SFXN3-201ENST00000224807 C8orf34Q49A92 452 aa18.61■□□□□ 0.57
SFXN3-201ENST00000224807 ANKRD50Q9ULJ7 1429 aa18.61■□□□□ 0.57
SFXN3-201ENST00000224807 E9PCH4 1651 aa18.61■□□□□ 0.57
SFXN3-201ENST00000224807 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
SFXN3-201ENST00000224807 ANKRD30AQ9BXX3 1397 aa18.61■□□□□ 0.57
SFXN3-201ENST00000224807 KIAA0586Q9BVV6 1533 aa18.61■□□□□ 0.57
SFXN3-201ENST00000224807 SEC24BO95487 1268 aa18.6■□□□□ 0.57
SFXN3-201ENST00000224807 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFXN3-201ENST00000224807 PDE3BQ13370 1112 aa18.6■□□□□ 0.57
SFXN3-201ENST00000224807 BCL2L13Q9BXK5 485 aa18.6■□□□□ 0.57
SFXN3-201ENST00000224807 ARHGEF12Q9NZN5 1544 aa18.59■□□□□ 0.57
SFXN3-201ENST00000224807 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
SFXN3-201ENST00000224807 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
SFXN3-201ENST00000224807 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
SFXN3-201ENST00000224807 CENPQQ7L2Z9 268 aaPredicted RBP18.58■□□□□ 0.56
SFXN3-201ENST00000224807 CLUAP1Q96AJ1 413 aa18.57■□□□□ 0.56
SFXN3-201ENST00000224807 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
SFXN3-201ENST00000224807 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
SFXN3-201ENST00000224807 PANK1Q8TE04 598 aa18.55■□□□□ 0.56
SFXN3-201ENST00000224807 APAF1O14727 1248 aa18.55■□□□□ 0.56
SFXN3-201ENST00000224807 KNSTRNQ9Y448 316 aa18.55■□□□□ 0.56
SFXN3-201ENST00000224807 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
SFXN3-201ENST00000224807 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
SFXN3-201ENST00000224807 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
SFXN3-201ENST00000224807 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
SFXN3-201ENST00000224807 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
SFXN3-201ENST00000224807 ADCY10Q96PN6 1610 aa18.53■□□□□ 0.56
SFXN3-201ENST00000224807 PLB1Q6P1J6 1458 aa18.53■□□□□ 0.56
SFXN3-201ENST00000224807 IGHDP01880 384 aa18.53■□□□□ 0.56
SFXN3-201ENST00000224807 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.53■□□□□ 0.56
SFXN3-201ENST00000224807 RRAGDQ9NQL2 400 aaPredicted RBP18.53■□□□□ 0.56
SFXN3-201ENST00000224807 CEP170Q5SW79 1584 aa18.52■□□□□ 0.56
SFXN3-201ENST00000224807 PANK2Q9BZ23 570 aa18.5■□□□□ 0.55
SFXN3-201ENST00000224807 C9orf84Q5VXU9 1444 aa18.5■□□□□ 0.55
SFXN3-201ENST00000224807 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
SFXN3-201ENST00000224807 KDM5DQ9BY66 1539 aa18.49■□□□□ 0.55
SFXN3-201ENST00000224807 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
SFXN3-201ENST00000224807 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
SFXN3-201ENST00000224807 VSIG10Q8N0Z9 540 aa18.49■□□□□ 0.55
SFXN3-201ENST00000224807 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
SFXN3-201ENST00000224807 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
SFXN3-201ENST00000224807 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
SFXN3-201ENST00000224807 KDM2BQ8NHM5 1336 aa18.47■□□□□ 0.55
SFXN3-201ENST00000224807 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
SFXN3-201ENST00000224807 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
SFXN3-201ENST00000224807 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.55
SFXN3-201ENST00000224807 TMF1P82094 1093 aa18.46■□□□□ 0.55
SFXN3-201ENST00000224807 TNNQ9UQP3 1299 aa18.46■□□□□ 0.55
SFXN3-201ENST00000224807 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.54
SFXN3-201ENST00000224807 BECN1Q14457 450 aa18.45■□□□□ 0.54
SFXN3-201ENST00000224807 PTPRGP23470 1445 aa18.45■□□□□ 0.54
SFXN3-201ENST00000224807 TRPM1Q7Z4N2 1603 aa18.44■□□□□ 0.54
SFXN3-201ENST00000224807 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
SFXN3-201ENST00000224807 FAM43AQ8N2R8 423 aa18.43■□□□□ 0.54
SFXN3-201ENST00000224807 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
SFXN3-201ENST00000224807 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
SFXN3-201ENST00000224807 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
SFXN3-201ENST00000224807 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
SFXN3-201ENST00000224807 UPF2Q9HAU5 1272 aaKnown RBP18.42■□□□□ 0.54
SFXN3-201ENST00000224807 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
SFXN3-201ENST00000224807 ARID3AQ99856 593 aa18.42■□□□□ 0.54
SFXN3-201ENST00000224807 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
SFXN3-201ENST00000224807 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms