RNA–Protein interactions for RNA: ENST00000224073.5

EDF1-201, Transcript of endothelial differentiation related factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDF1, Length 640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-201ENST00000224073 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
EDF1-201ENST00000224073 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
EDF1-201ENST00000224073 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
EDF1-201ENST00000224073 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
EDF1-201ENST00000224073 FBXO41Q8TF61 875 aa19.75■□□□□ 0.75
EDF1-201ENST00000224073 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
EDF1-201ENST00000224073 KDM5DQ9BY66 1539 aa19.74■□□□□ 0.75
EDF1-201ENST00000224073 DAPK1P53355 1430 aa19.73■□□□□ 0.75
EDF1-201ENST00000224073 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
EDF1-201ENST00000224073 CERKQ8TCT0 537 aa19.72■□□□□ 0.75
EDF1-201ENST00000224073 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
EDF1-201ENST00000224073 KIF15Q9NS87 1388 aa19.71■□□□□ 0.75
EDF1-201ENST00000224073 CEP170BQ9Y4F5 1589 aaPredicted RBP19.71■□□□□ 0.75
EDF1-201ENST00000224073 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
EDF1-201ENST00000224073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.746e-8■■■□□ 16
EDF1-201ENST00000224073 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
EDF1-201ENST00000224073 TNRQ92752 1358 aa19.7■□□□□ 0.74
EDF1-201ENST00000224073 DNMT1P26358 1616 aaKnown RBP19.69■□□□□ 0.74
EDF1-201ENST00000224073 PZPP20742 1482 aa19.68■□□□□ 0.74
EDF1-201ENST00000224073 DUOX2Q9NRD8 1548 aa19.68■□□□□ 0.74
EDF1-201ENST00000224073 RNF17Q9BXT8 1623 aaKnown RBP19.68■□□□□ 0.74
EDF1-201ENST00000224073 ABCC3O15438 1527 aa19.67■□□□□ 0.74
EDF1-201ENST00000224073 MROH1Q8NDA8 1641 aa19.67■□□□□ 0.74
EDF1-201ENST00000224073 ZNF142P52746 1687 aaPredicted RBP19.67■□□□□ 0.74
EDF1-201ENST00000224073 SHANK2Q9UPX8 1470 aa19.67■□□□□ 0.74
EDF1-201ENST00000224073 PTPRTO14522 1441 aa19.66■□□□□ 0.74
EDF1-201ENST00000224073 CEP152O94986 1710 aa19.65■□□□□ 0.74
EDF1-201ENST00000224073 A2ML1A8K2U0 1454 aa19.65■□□□□ 0.74
EDF1-201ENST00000224073 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
EDF1-201ENST00000224073 CFAP65Q6ZU64 1925 aaKnown RBP19.63■□□□□ 0.73
EDF1-201ENST00000224073 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
EDF1-201ENST00000224073 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
EDF1-201ENST00000224073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.731e-6■■□□□ 12.1
EDF1-201ENST00000224073 ZNF335Q9H4Z2 1342 aaPredicted RBP19.6■□□□□ 0.73
EDF1-201ENST00000224073 ITGAEP38570 1179 aa19.6■□□□□ 0.73
EDF1-201ENST00000224073 ERBINQ96RT1 1412 aa19.59■□□□□ 0.73
EDF1-201ENST00000224073 PKD2Q13563 968 aa19.58■□□□□ 0.72
EDF1-201ENST00000224073 PLA2R1Q13018 1463 aa19.58■□□□□ 0.72
EDF1-201ENST00000224073 ZC3H13Q5T200 1668 aaKnown RBP19.58■□□□□ 0.72
EDF1-201ENST00000224073 ERVK-7P63135 1459 aa19.57■□□□□ 0.72
EDF1-201ENST00000224073 LTBP4Q8N2S1 1624 aa19.57■□□□□ 0.72
EDF1-201ENST00000224073 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
EDF1-201ENST00000224073 UGGT1Q9NYU2 1555 aa19.55■□□□□ 0.72
EDF1-201ENST00000224073 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
EDF1-201ENST00000224073 THEMISQ8N1K5 641 aaPredicted RBP19.53■□□□□ 0.72
EDF1-201ENST00000224073 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
EDF1-201ENST00000224073 KANK1Q14678 1352 aa19.52■□□□□ 0.72
EDF1-201ENST00000224073 NEURL4Q96JN8 1562 aa19.52■□□□□ 0.71
EDF1-201ENST00000224073 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
EDF1-201ENST00000224073 ANKLE2Q86XL3 938 aa19.51■□□□□ 0.71
EDF1-201ENST00000224073 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
EDF1-201ENST00000224073 POLR1AO95602 1720 aaPredicted RBP19.5■□□□□ 0.71
EDF1-201ENST00000224073 ANKRD50Q9ULJ7 1429 aa19.48■□□□□ 0.71
EDF1-201ENST00000224073 NPHP4O75161 1426 aaPredicted RBP19.45■□□□□ 0.7
EDF1-201ENST00000224073 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
EDF1-201ENST00000224073 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
EDF1-201ENST00000224073 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
EDF1-201ENST00000224073 UBR1Q8IWV7 1749 aa19.44■□□□□ 0.7
EDF1-201ENST00000224073 LTKP29376 864 aa19.42■□□□□ 0.7
EDF1-201ENST00000224073 IDI1Q13907 227 aa19.42■□□□□ 0.7
EDF1-201ENST00000224073 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
EDF1-201ENST00000224073 PIK3C2BO00750 1634 aa19.42■□□□□ 0.7
EDF1-201ENST00000224073 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
EDF1-201ENST00000224073 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
EDF1-201ENST00000224073 SYNMO15061 1565 aa19.4■□□□□ 0.7
EDF1-201ENST00000224073 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
EDF1-201ENST00000224073 TXNDC2Q86VQ3 553 aa19.4■□□□□ 0.7
EDF1-201ENST00000224073 IQGAP1P46940 1657 aa19.39■□□□□ 0.69
EDF1-201ENST00000224073 MED14O60244 1454 aa19.37■□□□□ 0.69
EDF1-201ENST00000224073 ROCK1Q13464 1354 aa19.36■□□□□ 0.69
EDF1-201ENST00000224073 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
EDF1-201ENST00000224073 NOS1P29475 1434 aa19.35■□□□□ 0.69
EDF1-201ENST00000224073 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
EDF1-201ENST00000224073 UNC13BO14795 1591 aa19.34■□□□□ 0.69
EDF1-201ENST00000224073 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
EDF1-201ENST00000224073 PIP4K2BP78356 416 aa19.33■□□□□ 0.68
EDF1-201ENST00000224073 EID1Q9Y6B2 187 aa19.33■□□□□ 0.68
EDF1-201ENST00000224073 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
EDF1-201ENST00000224073 NUP155O75694 1391 aa19.32■□□□□ 0.68
EDF1-201ENST00000224073 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
EDF1-201ENST00000224073 STRCP1A6NGW2 1772 aa19.32■□□□□ 0.68
EDF1-201ENST00000224073 SLIT1O75093 1534 aa19.32■□□□□ 0.68
EDF1-201ENST00000224073 TET3O43151 1660 aa19.32■□□□□ 0.68
EDF1-201ENST00000224073 CHGAP10645 457 aaKnown RBP19.31■□□□□ 0.68
EDF1-201ENST00000224073 CPS1P31327 1500 aa19.3■□□□□ 0.68
EDF1-201ENST00000224073 RRBP1Q9P2E9 1410 aaKnown RBP19.29■□□□□ 0.68
EDF1-201ENST00000224073 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
EDF1-201ENST00000224073 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
EDF1-201ENST00000224073 E9PCH4 1651 aa19.29■□□□□ 0.68
EDF1-201ENST00000224073 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
EDF1-201ENST00000224073 BCANQ96GW7 911 aa19.28■□□□□ 0.68
EDF1-201ENST00000224073 ADGRB3O60242 1522 aa19.28■□□□□ 0.68
EDF1-201ENST00000224073 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.68
EDF1-201ENST00000224073 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.68
EDF1-201ENST00000224073 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
EDF1-201ENST00000224073 RPRD2Q5VT52 1461 aaKnown RBP19.26■□□□□ 0.67
EDF1-201ENST00000224073 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
EDF1-201ENST00000224073 LRRC7Q96NW7 1537 aa19.25■□□□□ 0.67
EDF1-201ENST00000224073 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
EDF1-201ENST00000224073 TOM1O60784 492 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms