RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 RRP12Q5JTH9 1297 aaKnown RBP8.46□□□□□ -1.06
RBM28-201ENST00000223073 TIGD1Q96MW7 591 aa8.46□□□□□ -1.06
RBM28-201ENST00000223073 CCDC191Q8NCU4 936 aa8.46□□□□□ -1.06
RBM28-201ENST00000223073 LMOD3Q0VAK6 560 aa8.45□□□□□ -1.06
RBM28-201ENST00000223073 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.062e-8■■□□□ 13.4
RBM28-201ENST00000223073 CFAP53Q96M91 514 aa8.45□□□□□ -1.06
RBM28-201ENST00000223073 ZBED9Q6R2W3 1325 aa8.45□□□□□ -1.06
RBM28-201ENST00000223073 DDX49Q9Y6V7 483 aaKnown RBP8.45□□□□□ -1.06
RBM28-201ENST00000223073 NUCB2P80303 420 aa8.45□□□□□ -1.06
RBM28-201ENST00000223073 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
RBM28-201ENST00000223073 DDX11Q96FC9 970 aa8.44□□□□□ -1.06
RBM28-201ENST00000223073 R3HCC1Q9Y3T6 440 aaKnown RBP8.44□□□□□ -1.06
RBM28-201ENST00000223073 CGNQ9P2M7 1197 aaKnown RBP8.44□□□□□ -1.06
RBM28-201ENST00000223073 INCENPQ9NQS7 918 aa8.44□□□□□ -1.06
RBM28-201ENST00000223073 PHLDB1Q86UU1 1377 aa8.43□□□□□ -1.06
RBM28-201ENST00000223073 GTF2A1P52655 376 aaPredicted RBP8.43□□□□□ -1.06
RBM28-201ENST00000223073 SMAP1Q8IYB5 467 aaPredicted RBP8.43□□□□□ -1.06
RBM28-201ENST00000223073 KIF20AO95235 890 aa8.43□□□□□ -1.06
RBM28-201ENST00000223073 TMCO5BA8MYB1 307 aa8.43□□□□□ -1.06
RBM28-201ENST00000223073 TDO2P48775 406 aa8.42□□□□□ -1.06
RBM28-201ENST00000223073 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
RBM28-201ENST00000223073 ZSCAN30Q86W11 494 aa8.42□□□□□ -1.06
RBM28-201ENST00000223073 SETSIPP0DME0 302 aa8.42□□□□□ -1.06
RBM28-201ENST00000223073 H0YHG0 523 aa8.41□□□□□ -1.06
RBM28-201ENST00000223073 UQCRHLA0A096LP55 91 aa8.41□□□□□ -1.06
RBM28-201ENST00000223073 UQCRHP07919 91 aa8.41□□□□□ -1.06
RBM28-201ENST00000223073 HSP90AB3PQ58FF7 597 aa8.41□□□□□ -1.06
RBM28-201ENST00000223073 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
RBM28-201ENST00000223073 TNNT1P13805 278 aa8.41□□□□□ -1.06
RBM28-201ENST00000223073 GOLIM4O00461 696 aa8.4□□□□□ -1.06
RBM28-201ENST00000223073 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
RBM28-201ENST00000223073 FBLN2P98095 1184 aa8.4□□□□□ -1.06
RBM28-201ENST00000223073 DYDC1Q8WWB3 177 aa8.4□□□□□ -1.06
RBM28-201ENST00000223073 SUDS3Q9H7L9 328 aaPredicted RBP8.4□□□□□ -1.06
RBM28-201ENST00000223073 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.06
RBM28-201ENST00000223073 NGEFQ8N5V2 710 aa8.4□□□□□ -1.06
RBM28-201ENST00000223073 HMGB1P1B2RPK0 211 aaPredicted RBP8.4□□□□□ -1.06
RBM28-201ENST00000223073 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.07
RBM28-201ENST00000223073 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.07
RBM28-201ENST00000223073 GOLGA6L19H0YKK7 550 aa8.4□□□□□ -1.07
RBM28-201ENST00000223073 ZRSR2Q15696 482 aaKnown RBP8.4□□□□□ -1.07
RBM28-201ENST00000223073 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
RBM28-201ENST00000223073 TRAK2O60296 914 aa8.39□□□□□ -1.07
RBM28-201ENST00000223073 PRDM10Q9NQV6 1147 aa8.39□□□□□ -1.07
RBM28-201ENST00000223073 POLR3GO15318 223 aaPredicted RBP8.39□□□□□ -1.07
RBM28-201ENST00000223073 GOLGA6L10A6NI86 522 aa8.39□□□□□ -1.07
RBM28-201ENST00000223073 KCNJ4P48050 445 aa8.39□□□□□ -1.07
RBM28-201ENST00000223073 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
RBM28-201ENST00000223073 CAGE1Q8TC20 777 aa8.39□□□□□ -1.07
RBM28-201ENST00000223073 CLCN1P35523 988 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 SASS6Q6UVJ0 657 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 KIF2AO00139 706 aaPredicted RBP8.38□□□□□ -1.07
RBM28-201ENST00000223073 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 KIAA0754O94854 1291 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 MBD3O95983 291 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 PABPN1Q86U42 306 aaKnown RBP eCLIP8.38□□□□□ -1.07
RBM28-201ENST00000223073 PRIMPOLQ96LW4 560 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 HS1BP3Q53T59 392 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 TERF1P54274 439 aa8.38□□□□□ -1.07
RBM28-201ENST00000223073 RBM25P49756 843 aaKnown RBP8.37□□□□□ -1.07
RBM28-201ENST00000223073 TTLL5Q6EMB2 1281 aa8.37□□□□□ -1.07
RBM28-201ENST00000223073 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
RBM28-201ENST00000223073 FAM184AQ8NB25 1140 aa8.37□□□□□ -1.07
RBM28-201ENST00000223073 CIZ1Q9ULV3 898 aaPredicted RBP8.37□□□□□ -1.07
RBM28-201ENST00000223073 GRPEL1Q9HAV7 217 aa8.37□□□□□ -1.07
RBM28-201ENST00000223073 TNIKQ9UKE5 1360 aa8.36□□□□□ -1.07
RBM28-201ENST00000223073 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
RBM28-201ENST00000223073 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
RBM28-201ENST00000223073 CCDC91Q7Z6B0 441 aa8.36□□□□□ -1.07
RBM28-201ENST00000223073 IFT57Q9NWB7 429 aa8.36□□□□□ -1.07
RBM28-201ENST00000223073 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
RBM28-201ENST00000223073 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
RBM28-201ENST00000223073 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
RBM28-201ENST00000223073 NAP1L1P55209 391 aaKnown RBP8.35□□□□□ -1.07
RBM28-201ENST00000223073 SARNPP82979 210 aaKnown RBP8.35□□□□□ -1.07
RBM28-201ENST00000223073 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
RBM28-201ENST00000223073 VGLL3A8MV65 326 aa8.35□□□□□ -1.07
RBM28-201ENST00000223073 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
RBM28-201ENST00000223073 ZNF592Q92610 1267 aa8.35□□□□□ -1.07
RBM28-201ENST00000223073 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
RBM28-201ENST00000223073 CCDC112Q8NEF3 446 aa8.35□□□□□ -1.07
RBM28-201ENST00000223073 BECN2A8MW95 431 aa8.35□□□□□ -1.07
RBM28-201ENST00000223073 IVLP07476 585 aa8.34□□□□□ -1.07
RBM28-201ENST00000223073 TXLNBQ8N3L3 684 aa8.34□□□□□ -1.07
RBM28-201ENST00000223073 TICAM2Q86XR7 235 aa8.34□□□□□ -1.08
RBM28-201ENST00000223073 CCDC94Q9BW85 323 aaPredicted RBP8.34□□□□□ -1.08
RBM28-201ENST00000223073 CLIP1P30622 1438 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 MFAP1P55081 439 aaKnown RBP8.33□□□□□ -1.08
RBM28-201ENST00000223073 LIG1P18858 919 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 RUFY1Q96T51 708 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 KIAA1328Q86T90 577 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 REC8O95072 547 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 RRP1P56182 461 aaKnown RBP8.33□□□□□ -1.08
RBM28-201ENST00000223073 CREBRFQ8IUR6 639 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 CCAR2Q8N163 923 aaKnown RBP8.33□□□□□ -1.08
RBM28-201ENST00000223073 CEP162Q5TB80 1403 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 ERLIN1O75477 346 aa8.33□□□□□ -1.08
RBM28-201ENST00000223073 CGNL1Q0VF96 1302 aa8.32□□□□□ -1.08
RBM28-201ENST00000223073 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
RBM28-201ENST00000223073 FEZ1Q99689 392 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms