RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 MAGI2Q86UL8 1455 aa21.88■■□□□ 1.09
PAF1-201ENST00000221265 IQGAP3Q86VI3 1631 aa21.87■■□□□ 1.09
PAF1-201ENST00000221265 ABCA6Q8N139 1617 aa21.87■■□□□ 1.09
PAF1-201ENST00000221265 DHX29Q7Z478 1369 aaKnown RBP21.86■■□□□ 1.09
PAF1-201ENST00000221265 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
PAF1-201ENST00000221265 TONSLQ96HA7 1378 aa21.85■■□□□ 1.09
PAF1-201ENST00000221265 DEPDC5O75140 1603 aa21.84■■□□□ 1.09
PAF1-201ENST00000221265 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
PAF1-201ENST00000221265 KIF3BO15066 747 aa21.83■■□□□ 1.08
PAF1-201ENST00000221265 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.08
PAF1-201ENST00000221265 EIF2AK4Q9P2K8 1649 aaKnown RBP21.83■■□□□ 1.08
PAF1-201ENST00000221265 A2MP01023 1474 aa21.82■■□□□ 1.08
PAF1-201ENST00000221265 RPRD2Q5VT52 1461 aaKnown RBP21.81■■□□□ 1.08
PAF1-201ENST00000221265 DIP2CQ9Y2E4 1556 aa21.81■■□□□ 1.08
PAF1-201ENST00000221265 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
PAF1-201ENST00000221265 MROH1Q8NDA8 1641 aa21.8■■□□□ 1.08
PAF1-201ENST00000221265 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
PAF1-201ENST00000221265 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
PAF1-201ENST00000221265 COL17A1Q9UMD9 1497 aaPredicted RBP21.78■■□□□ 1.08
PAF1-201ENST00000221265 ZMYM4Q5VZL5 1548 aa21.77■■□□□ 1.08
PAF1-201ENST00000221265 PRDM15P57071 1507 aaPredicted RBP21.75■■□□□ 1.07
PAF1-201ENST00000221265 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
PAF1-201ENST00000221265 L3MBTL2Q969R5 705 aa21.74■■□□□ 1.07
PAF1-201ENST00000221265 E9PCH4 1651 aa21.74■■□□□ 1.07
PAF1-201ENST00000221265 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
PAF1-201ENST00000221265 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
PAF1-201ENST00000221265 BCORL1Q5H9F3 1711 aa21.71■■□□□ 1.07
PAF1-201ENST00000221265 TET3O43151 1660 aa21.7■■□□□ 1.06
PAF1-201ENST00000221265 CEP152O94986 1710 aa21.7■■□□□ 1.06
PAF1-201ENST00000221265 KANK1Q14678 1352 aa21.69■■□□□ 1.06
PAF1-201ENST00000221265 GGT6Q6P531 493 aa21.68■■□□□ 1.06
PAF1-201ENST00000221265 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
PAF1-201ENST00000221265 MIER1Q8N108 512 aa21.67■■□□□ 1.06
PAF1-201ENST00000221265 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
PAF1-201ENST00000221265 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
PAF1-201ENST00000221265 ATP10AO60312 1499 aa21.63■■□□□ 1.05
PAF1-201ENST00000221265 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
PAF1-201ENST00000221265 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
PAF1-201ENST00000221265 CFAP65Q6ZU64 1925 aaKnown RBP21.63■■□□□ 1.05
PAF1-201ENST00000221265 EFCAB6Q5THR3 1501 aa21.62■■□□□ 1.05
PAF1-201ENST00000221265 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
PAF1-201ENST00000221265 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
PAF1-201ENST00000221265 ABCC3O15438 1527 aa21.59■■□□□ 1.05
PAF1-201ENST00000221265 ARHGEF40Q8TER5 1519 aa21.58■■□□□ 1.05
PAF1-201ENST00000221265 PTPRTO14522 1441 aa21.58■■□□□ 1.04
PAF1-201ENST00000221265 TRPM2O94759 1503 aa21.57■■□□□ 1.04
PAF1-201ENST00000221265 WASHC2CQ9Y4E1 1318 aa21.57■■□□□ 1.04
PAF1-201ENST00000221265 REREQ9P2R6 1566 aa21.56■■□□□ 1.04
PAF1-201ENST00000221265 CLTCL1P53675 1640 aa21.56■■□□□ 1.04
PAF1-201ENST00000221265 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
PAF1-201ENST00000221265 RGL3Q3MIN7 710 aa21.54■■□□□ 1.04
PAF1-201ENST00000221265 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
PAF1-201ENST00000221265 NPATQ14207 1427 aa21.53■■□□□ 1.04
PAF1-201ENST00000221265 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
PAF1-201ENST00000221265 AGLP35573 1532 aa21.51■■□□□ 1.03
PAF1-201ENST00000221265 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
PAF1-201ENST00000221265 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
PAF1-201ENST00000221265 DCAF11Q8TEB1 546 aa21.51■■□□□ 1.03
PAF1-201ENST00000221265 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
PAF1-201ENST00000221265 SPATA31E1Q6ZUB1 1445 aa21.49■■□□□ 1.03
PAF1-201ENST00000221265 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
PAF1-201ENST00000221265 MLECQ14165 292 aa21.46■■□□□ 1.03
PAF1-201ENST00000221265 UHRF1BP1Q6BDS2 1440 aa21.45■■□□□ 1.02
PAF1-201ENST00000221265 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
PAF1-201ENST00000221265 KIF1BO60333 1816 aa21.43■■□□□ 1.02
PAF1-201ENST00000221265 CLTCQ00610 1675 aaKnown RBP21.43■■□□□ 1.02
PAF1-201ENST00000221265 ARHGAP31Q2M1Z3 1444 aa21.41■■□□□ 1.02
PAF1-201ENST00000221265 MROH2AA6NES4 1674 aa21.41■■□□□ 1.02
PAF1-201ENST00000221265 SYNMO15061 1565 aa21.41■■□□□ 1.02
PAF1-201ENST00000221265 NOS1P29475 1434 aa21.4■■□□□ 1.02
PAF1-201ENST00000221265 HSPA5P11021 654 aaKnown RBP21.4■■□□□ 1.02
PAF1-201ENST00000221265 PRAG1Q86YV5 1406 aa21.39■■□□□ 1.02
PAF1-201ENST00000221265 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.02
PAF1-201ENST00000221265 PREX1Q8TCU6 1659 aa21.38■■□□□ 1.01
PAF1-201ENST00000221265 RALGAPBQ86X10 1494 aa21.38■■□□□ 1.01
PAF1-201ENST00000221265 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
PAF1-201ENST00000221265 TRPM1Q7Z4N2 1603 aa21.36■■□□□ 1.01
PAF1-201ENST00000221265 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
PAF1-201ENST00000221265 FBXO31Q5XUX0 539 aaPredicted RBP21.36■■□□□ 1.01
PAF1-201ENST00000221265 PIK3C2BO00750 1634 aa21.35■■□□□ 1.01
PAF1-201ENST00000221265 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
PAF1-201ENST00000221265 NEURL4Q96JN8 1562 aa21.34■■□□□ 1.01
PAF1-201ENST00000221265 ADGRB3O60242 1522 aa21.34■■□□□ 1.01
PAF1-201ENST00000221265 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1
PAF1-201ENST00000221265 MADDQ8WXG6 1647 aa21.32■■□□□ 1
PAF1-201ENST00000221265 IFT172Q9UG01 1749 aa21.32■■□□□ 1
PAF1-201ENST00000221265 NBPF1Q3BBV0 1214 aa21.31■■□□□ 1
PAF1-201ENST00000221265 ERVK-7P63135 1459 aa21.3■■□□□ 1
PAF1-201ENST00000221265 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
PAF1-201ENST00000221265 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
PAF1-201ENST00000221265 USP47Q96K76 1375 aa21.29■■□□□ 1
PAF1-201ENST00000221265 IDI1Q13907 227 aa21.29■■□□□ 1
PAF1-201ENST00000221265 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
PAF1-201ENST00000221265 PPLO60437 1756 aa21.26■□□□□ 0.99
PAF1-201ENST00000221265 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
PAF1-201ENST00000221265 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
PAF1-201ENST00000221265 ZMYM3Q14202 1370 aa21.25■□□□□ 0.99
PAF1-201ENST00000221265 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
PAF1-201ENST00000221265 ADGRF5Q8IZF2 1346 aa21.24■□□□□ 0.99
PAF1-201ENST00000221265 SLC52A1Q9NWF4 448 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms