RNA–Protein interactions for RNA: ENST00000217515.10

TXNL1-201, Transcript of thioredoxin like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TXNL1, Length 6,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNL1-201ENST00000217515 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
TXNL1-201ENST00000217515 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
TXNL1-201ENST00000217515 CEP89Q96ST8 783 aa13.9□□□□□ -0.18
TXNL1-201ENST00000217515 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
TXNL1-201ENST00000217515 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
TXNL1-201ENST00000217515 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
TXNL1-201ENST00000217515 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
TXNL1-201ENST00000217515 HMMRO75330 724 aa13.87□□□□□ -0.19
TXNL1-201ENST00000217515 RBM33Q96EV2 1170 aaKnown RBP13.87□□□□□ -0.19
TXNL1-201ENST00000217515 COG3Q96JB2 828 aa13.87□□□□□ -0.19
TXNL1-201ENST00000217515 TEFQ10587 303 aa13.86□□□□□ -0.19
TXNL1-201ENST00000217515 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
TXNL1-201ENST00000217515 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
TXNL1-201ENST00000217515 TNIKQ9UKE5 1360 aa13.85□□□□□ -0.19
TXNL1-201ENST00000217515 TPM4P67936 248 aa13.85□□□□□ -0.19
TXNL1-201ENST00000217515 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
TXNL1-201ENST00000217515 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
TXNL1-201ENST00000217515 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.19
TXNL1-201ENST00000217515 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
TXNL1-201ENST00000217515 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
TXNL1-201ENST00000217515 NUTM2AQ8IVF1 878 aaPredicted RBP13.83□□□□□ -0.2
TXNL1-201ENST00000217515 PIP4K2BP78356 416 aa13.82□□□□□ -0.2
TXNL1-201ENST00000217515 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
TXNL1-201ENST00000217515 EIF2S2P20042 333 aaKnown RBP13.82□□□□□ -0.2
TXNL1-201ENST00000217515 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
TXNL1-201ENST00000217515 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
TXNL1-201ENST00000217515 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
TXNL1-201ENST00000217515 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
TXNL1-201ENST00000217515 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
TXNL1-201ENST00000217515 RWDD1Q9H446 243 aaPredicted RBP13.8□□□□□ -0.2
TXNL1-201ENST00000217515 PES1O00541 588 aaKnown RBP13.8□□□□□ -0.2
TXNL1-201ENST00000217515 MPHOSPH9Q99550 1183 aa13.8□□□□□ -0.2
TXNL1-201ENST00000217515 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
TXNL1-201ENST00000217515 MINK1Q8N4C8 1332 aaPredicted RBP13.8□□□□□ -0.2
TXNL1-201ENST00000217515 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
TXNL1-201ENST00000217515 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
TXNL1-201ENST00000217515 NAP1L5Q96NT1 182 aaPredicted RBP13.79□□□□□ -0.2
TXNL1-201ENST00000217515 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
TXNL1-201ENST00000217515 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
TXNL1-201ENST00000217515 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
TXNL1-201ENST00000217515 SYNE3Q6ZMZ3 975 aa13.78□□□□□ -0.2
TXNL1-201ENST00000217515 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
TXNL1-201ENST00000217515 CCDC43Q96MW1 224 aaKnown RBP13.78□□□□□ -0.2
TXNL1-201ENST00000217515 APPP05067 770 aa13.77□□□□□ -0.21
TXNL1-201ENST00000217515 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
TXNL1-201ENST00000217515 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
TXNL1-201ENST00000217515 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
TXNL1-201ENST00000217515 TPD52L1Q16890 204 aaPredicted RBP13.76□□□□□ -0.21
TXNL1-201ENST00000217515 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
TXNL1-201ENST00000217515 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
TXNL1-201ENST00000217515 C9orf78Q9NZ63 289 aaPredicted RBP13.76□□□□□ -0.21
TXNL1-201ENST00000217515 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
TXNL1-201ENST00000217515 MSNP26038 577 aaKnown RBP13.75□□□□□ -0.21
TXNL1-201ENST00000217515 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
TXNL1-201ENST00000217515 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
TXNL1-201ENST00000217515 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
TXNL1-201ENST00000217515 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
TXNL1-201ENST00000217515 LRRFIP1Q32MZ4 808 aaKnown RBP13.74□□□□□ -0.21
TXNL1-201ENST00000217515 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
TXNL1-201ENST00000217515 PTPRGP23470 1445 aa13.74□□□□□ -0.21
TXNL1-201ENST00000217515 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 UACAQ9BZF9 1416 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 RALBP1Q15311 655 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 PMFBP1Q8TBY8 1022 aa13.73□□□□□ -0.21
TXNL1-201ENST00000217515 FYB1O15117 783 aa13.72□□□□□ -0.21
TXNL1-201ENST00000217515 H3BQV1 296 aa13.72□□□□□ -0.21
TXNL1-201ENST00000217515 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
TXNL1-201ENST00000217515 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
TXNL1-201ENST00000217515 MFAP1P55081 439 aaKnown RBP13.72□□□□□ -0.21
TXNL1-201ENST00000217515 RRP7AQ9Y3A4 280 aaKnown RBP13.72□□□□□ -0.21
TXNL1-201ENST00000217515 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
TXNL1-201ENST00000217515 DDX58O95786 925 aaKnown RBP13.71□□□□□ -0.21
TXNL1-201ENST00000217515 CCDC27Q2M243 656 aa13.71□□□□□ -0.22
TXNL1-201ENST00000217515 CSPP1Q1MSJ5 1256 aa13.7□□□□□ -0.22
TXNL1-201ENST00000217515 TPM2P07951 284 aa13.7□□□□□ -0.22
TXNL1-201ENST00000217515 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
TXNL1-201ENST00000217515 FAM184AQ8NB25 1140 aa13.7□□□□□ -0.22
TXNL1-201ENST00000217515 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
TXNL1-201ENST00000217515 SYAP1Q96A49 352 aaPredicted RBP13.69□□□□□ -0.22
TXNL1-201ENST00000217515 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
TXNL1-201ENST00000217515 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
TXNL1-201ENST00000217515 TPM3P06753 285 aa13.68□□□□□ -0.22
TXNL1-201ENST00000217515 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
TXNL1-201ENST00000217515 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
TXNL1-201ENST00000217515 PLIN1O60240 522 aa13.67□□□□□ -0.22
TXNL1-201ENST00000217515 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
TXNL1-201ENST00000217515 CGNL1Q0VF96 1302 aa13.67□□□□□ -0.22
TXNL1-201ENST00000217515 TRIM29Q14134 588 aa13.67□□□□□ -0.22
TXNL1-201ENST00000217515 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
TXNL1-201ENST00000217515 ERICH2A1L162 156 aa13.67□□□□□ -0.22
TXNL1-201ENST00000217515 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
TXNL1-201ENST00000217515 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
TXNL1-201ENST00000217515 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
TXNL1-201ENST00000217515 CENPJQ9HC77 1338 aaPredicted RBP13.66□□□□□ -0.22
TXNL1-201ENST00000217515 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
TXNL1-201ENST00000217515 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
TXNL1-201ENST00000217515 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms