RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.33
CLDN18-201ENST00000183605 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
CLDN18-201ENST00000183605 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
CLDN18-201ENST00000183605 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
CLDN18-201ENST00000183605 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
CLDN18-201ENST00000183605 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
CLDN18-201ENST00000183605 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
CLDN18-201ENST00000183605 CASKIN1Q8WXD9 1431 aa12.95□□□□□ -0.34
CLDN18-201ENST00000183605 BRD4O60885 1362 aaPredicted RBP12.94□□□□□ -0.34
CLDN18-201ENST00000183605 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
CLDN18-201ENST00000183605 PKD2Q13563 968 aa12.93□□□□□ -0.34
CLDN18-201ENST00000183605 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
CLDN18-201ENST00000183605 ANP32BQ92688 251 aaKnown RBP12.92□□□□□ -0.34
CLDN18-201ENST00000183605 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
CLDN18-201ENST00000183605 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
CLDN18-201ENST00000183605 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
CLDN18-201ENST00000183605 RGL3Q3MIN7 710 aa12.89□□□□□ -0.35
CLDN18-201ENST00000183605 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
CLDN18-201ENST00000183605 ARID3AQ99856 593 aa12.87□□□□□ -0.35
CLDN18-201ENST00000183605 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
CLDN18-201ENST00000183605 PODXL2Q9NZ53 605 aa12.87□□□□□ -0.35
CLDN18-201ENST00000183605 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
CLDN18-201ENST00000183605 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
CLDN18-201ENST00000183605 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
CLDN18-201ENST00000183605 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLDN18-201ENST00000183605 GLI2P10070 1586 aa12.84□□□□□ -0.35
CLDN18-201ENST00000183605 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
CLDN18-201ENST00000183605 UHRF1BP1LA0JNW5 1464 aa12.84□□□□□ -0.35
CLDN18-201ENST00000183605 CLCN1P35523 988 aa12.83□□□□□ -0.36
CLDN18-201ENST00000183605 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
CLDN18-201ENST00000183605 TRAK2O60296 914 aa12.82□□□□□ -0.36
CLDN18-201ENST00000183605 MRE11P49959 708 aa12.82□□□□□ -0.36
CLDN18-201ENST00000183605 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
CLDN18-201ENST00000183605 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
CLDN18-201ENST00000183605 ESPNB1AK53 854 aa12.82□□□□□ -0.36
CLDN18-201ENST00000183605 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
CLDN18-201ENST00000183605 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
CLDN18-201ENST00000183605 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
CLDN18-201ENST00000183605 PANK3Q9H999 370 aa12.81□□□□□ -0.36
CLDN18-201ENST00000183605 KDM5BQ9UGL1 1544 aa12.81□□□□□ -0.36
CLDN18-201ENST00000183605 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
CLDN18-201ENST00000183605 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
CLDN18-201ENST00000183605 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
CLDN18-201ENST00000183605 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
CLDN18-201ENST00000183605 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
CLDN18-201ENST00000183605 COG6Q9Y2V7 657 aa12.8□□□□□ -0.36
CLDN18-201ENST00000183605 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
CLDN18-201ENST00000183605 MSNP26038 577 aaKnown RBP12.8□□□□□ -0.36
CLDN18-201ENST00000183605 MCM4P33991 863 aa12.8□□□□□ -0.36
CLDN18-201ENST00000183605 MFAP1P55081 439 aaKnown RBP12.8□□□□□ -0.36
CLDN18-201ENST00000183605 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
CLDN18-201ENST00000183605 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
CLDN18-201ENST00000183605 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
CLDN18-201ENST00000183605 SAMD9Q5K651 1589 aa12.79□□□□□ -0.36
CLDN18-201ENST00000183605 SPATA31E1Q6ZUB1 1445 aa12.79□□□□□ -0.36
CLDN18-201ENST00000183605 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
CLDN18-201ENST00000183605 NCLP19338 710 aaKnown RBP12.78□□□□□ -0.36
CLDN18-201ENST00000183605 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
CLDN18-201ENST00000183605 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.36
CLDN18-201ENST00000183605 BCAR3O75815 825 aa12.77□□□□□ -0.36
CLDN18-201ENST00000183605 SEC24BO95487 1268 aa12.77□□□□□ -0.36
CLDN18-201ENST00000183605 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.36
CLDN18-201ENST00000183605 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.37
CLDN18-201ENST00000183605 GRPEL1Q9HAV7 217 aa12.77□□□□□ -0.37
CLDN18-201ENST00000183605 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
CLDN18-201ENST00000183605 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
CLDN18-201ENST00000183605 TMF1P82094 1093 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 PANK1Q8TE04 598 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLDN18-201ENST00000183605 NUP155O75694 1391 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 EFCAB5A4FU69 1503 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 TPM2P07951 284 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 CLUAP1Q96AJ1 413 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
CLDN18-201ENST00000183605 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
CLDN18-201ENST00000183605 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
CLDN18-201ENST00000183605 APAF1O14727 1248 aa12.74□□□□□ -0.37
CLDN18-201ENST00000183605 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
CLDN18-201ENST00000183605 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
CLDN18-201ENST00000183605 IGHDP01880 384 aa12.73□□□□□ -0.37
CLDN18-201ENST00000183605 TSPY4P0CV99 314 aa12.73□□□□□ -0.37
CLDN18-201ENST00000183605 TSPY10P0CW01 314 aa12.73□□□□□ -0.37
CLDN18-201ENST00000183605 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
CLDN18-201ENST00000183605 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
CLDN18-201ENST00000183605 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
CLDN18-201ENST00000183605 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
CLDN18-201ENST00000183605 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
CLDN18-201ENST00000183605 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
CLDN18-201ENST00000183605 DIP2BQ9P265 1576 aa12.72□□□□□ -0.37
CLDN18-201ENST00000183605 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
CLDN18-201ENST00000183605 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
CLDN18-201ENST00000183605 SUPT6HQ7KZ85 1726 aaKnown RBP12.71□□□□□ -0.37
CLDN18-201ENST00000183605 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
CLDN18-201ENST00000183605 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
CLDN18-201ENST00000183605 TEX14Q8IWB6 1497 aa12.71□□□□□ -0.37
CLDN18-201ENST00000183605 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
CLDN18-201ENST00000183605 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
CLDN18-201ENST00000183605 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms