RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 UNC13BO14795 1591 aa32.13■■■□□ 2.73
HOXC8-201ENST00000040584 KDM5DQ9BY66 1539 aa32.11■■■□□ 2.73
HOXC8-201ENST00000040584 KIF3BO15066 747 aa32.11■■■□□ 2.73
HOXC8-201ENST00000040584 MAGI2Q86UL8 1455 aa32.11■■■□□ 2.73
HOXC8-201ENST00000040584 FOXD1Q16676 465 aa32.09■■■□□ 2.73
HOXC8-201ENST00000040584 EIF2AK4Q9P2K8 1649 aaKnown RBP32.07■■■□□ 2.72
HOXC8-201ENST00000040584 FAM135AQ9P2D6 1515 aa32.04■■■□□ 2.72
HOXC8-201ENST00000040584 SIN3AQ96ST3 1273 aa32.04■■■□□ 2.72
HOXC8-201ENST00000040584 PKD2Q13563 968 aa32.03■■■□□ 2.72
HOXC8-201ENST00000040584 DEPDC5O75140 1603 aa32.02■■■□□ 2.72
HOXC8-201ENST00000040584 ATP10AO60312 1499 aa32■■■□□ 2.71
HOXC8-201ENST00000040584 IQGAP3Q86VI3 1631 aa32■■■□□ 2.71
HOXC8-201ENST00000040584 NEUROD1Q13562 356 aa31.99■■■□□ 2.71
HOXC8-201ENST00000040584 MROH1Q8NDA8 1641 aa31.96■■■□□ 2.71
HOXC8-201ENST00000040584 GGT6Q6P531 493 aa31.94■■■□□ 2.7
HOXC8-201ENST00000040584 ANKRD30BQ9BXX2 1392 aa31.94■■■□□ 2.7
HOXC8-201ENST00000040584 PRDM15P57071 1507 aaPredicted RBP31.93■■■□□ 2.7
HOXC8-201ENST00000040584 ARHGEF40Q8TER5 1519 aa31.93■■■□□ 2.7
HOXC8-201ENST00000040584 RNF17Q9BXT8 1623 aaKnown RBP31.93■■■□□ 2.7
HOXC8-201ENST00000040584 KANK1Q14678 1352 aa31.93■■■□□ 2.7
HOXC8-201ENST00000040584 BCORL1Q5H9F3 1711 aa31.93■■■□□ 2.7
HOXC8-201ENST00000040584 VWDEQ8N2E2 1590 aa31.91■■■□□ 2.7
HOXC8-201ENST00000040584 REREQ9P2R6 1566 aa31.89■■■□□ 2.7
HOXC8-201ENST00000040584 SIGLEC1Q9BZZ2 1709 aa31.83■■■□□ 2.69
HOXC8-201ENST00000040584 AGLP35573 1532 aa31.81■■■□□ 2.68
HOXC8-201ENST00000040584 TET3O43151 1660 aa31.8■■■□□ 2.68
HOXC8-201ENST00000040584 TIMELESSQ9UNS1 1208 aa31.8■■■□□ 2.68
HOXC8-201ENST00000040584 WASHC2CQ9Y4E1 1318 aa31.79■■■□□ 2.68
HOXC8-201ENST00000040584 CEP152O94986 1710 aa31.78■■■□□ 2.68
HOXC8-201ENST00000040584 E9PCH4 1651 aa31.78■■■□□ 2.68
HOXC8-201ENST00000040584 LMTK2Q8IWU2 1503 aa31.77■■■□□ 2.68
HOXC8-201ENST00000040584 ABCC3O15438 1527 aa31.75■■■□□ 2.67
HOXC8-201ENST00000040584 PLA2R1Q13018 1463 aa31.74■■■□□ 2.67
HOXC8-201ENST00000040584 RPRD2Q5VT52 1461 aaKnown RBP31.74■■■□□ 2.67
HOXC8-201ENST00000040584 TONSLQ96HA7 1378 aa31.74■■■□□ 2.67
HOXC8-201ENST00000040584 MLECQ14165 292 aa31.72■■■□□ 2.67
HOXC8-201ENST00000040584 DIEXFQ68CQ4 756 aaKnown RBP31.72■■■□□ 2.67
HOXC8-201ENST00000040584 EFCAB6Q5THR3 1501 aa31.72■■■□□ 2.67
HOXC8-201ENST00000040584 ARID4BQ4LE39 1312 aaPredicted RBP31.7■■■□□ 2.66
HOXC8-201ENST00000040584 ZNF316A6NFI3 1004 aaPredicted RBP31.65■■■□□ 2.66
HOXC8-201ENST00000040584 CCDC144AA2RUR9 1427 aa31.65■■■□□ 2.66
HOXC8-201ENST00000040584 ZC3H13Q5T200 1668 aaKnown RBP31.65■■■□□ 2.66
HOXC8-201ENST00000040584 CAMSAP1Q5T5Y3 1602 aa31.64■■■□□ 2.66
HOXC8-201ENST00000040584 NPATQ14207 1427 aa31.64■■■□□ 2.66
HOXC8-201ENST00000040584 PPP6R1Q9UPN7 881 aa31.63■■■□□ 2.65
HOXC8-201ENST00000040584 PTPRTO14522 1441 aa31.63■■■□□ 2.65
HOXC8-201ENST00000040584 SPHKAPQ2M3C7 1700 aa31.61■■■□□ 2.65
HOXC8-201ENST00000040584 L3MBTL2Q969R5 705 aa31.61■■■□□ 2.65
HOXC8-201ENST00000040584 PPP1R15AO75807 674 aaPredicted RBP31.59■■■□□ 2.65
HOXC8-201ENST00000040584 TRPM2O94759 1503 aa31.59■■■□□ 2.65
HOXC8-201ENST00000040584 CFAP65Q6ZU64 1925 aaKnown RBP31.56■■■□□ 2.64
HOXC8-201ENST00000040584 ARHGAP31Q2M1Z3 1444 aa31.55■■■□□ 2.64
HOXC8-201ENST00000040584 CLTCQ00610 1675 aaKnown RBP31.55■■■□□ 2.64
HOXC8-201ENST00000040584 ESF1Q9H501 851 aaKnown RBP31.51■■■□□ 2.63
HOXC8-201ENST00000040584 CLTCL1P53675 1640 aa31.5■■■□□ 2.63
HOXC8-201ENST00000040584 UGGT1Q9NYU2 1555 aa31.49■■■□□ 2.63
HOXC8-201ENST00000040584 NOS1P29475 1434 aa31.47■■■□□ 2.63
HOXC8-201ENST00000040584 RGL3Q3MIN7 710 aa31.46■■■□□ 2.63
HOXC8-201ENST00000040584 CNTLNQ9NXG0 1405 aa31.46■■■□□ 2.63
HOXC8-201ENST00000040584 FBXO31Q5XUX0 539 aaPredicted RBP31.44■■■□□ 2.62
HOXC8-201ENST00000040584 ZMYM3Q14202 1370 aa31.42■■■□□ 2.62
HOXC8-201ENST00000040584 SPATA31E1Q6ZUB1 1445 aa31.41■■■□□ 2.62
HOXC8-201ENST00000040584 PREX1Q8TCU6 1659 aa31.41■■■□□ 2.62
HOXC8-201ENST00000040584 SYNMO15061 1565 aa31.4■■■□□ 2.62
HOXC8-201ENST00000040584 DCAF11Q8TEB1 546 aa31.4■■■□□ 2.62
HOXC8-201ENST00000040584 ERVK-7P63135 1459 aa31.38■■■□□ 2.61
HOXC8-201ENST00000040584 CENPBP07199 599 aaPredicted RBP31.38■■■□□ 2.61
HOXC8-201ENST00000040584 KDM2AQ9Y2K7 1162 aa31.38■■■□□ 2.61
HOXC8-201ENST00000040584 NBPF8Q3BBV2 869 aa31.35■■■□□ 2.61
HOXC8-201ENST00000040584 KIF1BO60333 1816 aa31.33■■■□□ 2.61
HOXC8-201ENST00000040584 ZNF326Q5BKZ1 582 aaKnown RBP31.33■■■□□ 2.61
HOXC8-201ENST00000040584 CHGAP10645 457 aaKnown RBP31.32■■■□□ 2.6
HOXC8-201ENST00000040584 IDI1Q13907 227 aa31.32■■■□□ 2.6
HOXC8-201ENST00000040584 PIK3C2BO00750 1634 aa31.32■■■□□ 2.6
HOXC8-201ENST00000040584 FER1L4A9Z1Z3 1794 aa31.31■■■□□ 2.6
HOXC8-201ENST00000040584 SLC52A1Q9NWF4 448 aa31.31■■■□□ 2.6
HOXC8-201ENST00000040584 MROH2AA6NES4 1674 aa31.31■■■□□ 2.6
HOXC8-201ENST00000040584 SPATA31D1Q6ZQQ2 1576 aa31.3■■■□□ 2.6
HOXC8-201ENST00000040584 SCAF1Q9H7N4 1312 aaKnown RBP31.3■■■□□ 2.6
HOXC8-201ENST00000040584 NEURL4Q96JN8 1562 aa31.28■■■□□ 2.6
HOXC8-201ENST00000040584 CEBPAP49715 358 aaPredicted RBP31.27■■■□□ 2.6
HOXC8-201ENST00000040584 ADGRB3O60242 1522 aa31.26■■■□□ 2.6
HOXC8-201ENST00000040584 UHRF1BP1Q6BDS2 1440 aa31.26■■■□□ 2.59
HOXC8-201ENST00000040584 MADDQ8WXG6 1647 aa31.22■■■□□ 2.59
HOXC8-201ENST00000040584 PLPPR3Q6T4P5 718 aa31.21■■■□□ 2.59
HOXC8-201ENST00000040584 C3P01024 1663 aa31.21■■■□□ 2.59
HOXC8-201ENST00000040584 PRAG1Q86YV5 1406 aa31.19■■■□□ 2.58
HOXC8-201ENST00000040584 ADAMTSL3P82987 1691 aa31.18■■■□□ 2.58
HOXC8-201ENST00000040584 TNRQ92752 1358 aa31.18■■■□□ 2.58
HOXC8-201ENST00000040584 RIMS1Q86UR5 1692 aaKnown RBP31.16■■■□□ 2.58
HOXC8-201ENST00000040584 TMEM131LA2VDJ0 1609 aa31.15■■■□□ 2.58
HOXC8-201ENST00000040584 STAC3Q96MF2 364 aa31.14■■■□□ 2.58
HOXC8-201ENST00000040584 STAG3Q9UJ98 1225 aa31.13■■■□□ 2.57
HOXC8-201ENST00000040584 MYO5BQ9ULV0 1848 aa31.12■■■□□ 2.57
HOXC8-201ENST00000040584 IFT172Q9UG01 1749 aa31.12■■■□□ 2.57
HOXC8-201ENST00000040584 RPGRIP1LQ68CZ1 1315 aa31.11■■■□□ 2.57
HOXC8-201ENST00000040584 RALGAPBQ86X10 1494 aa31.11■■■□□ 2.57
HOXC8-201ENST00000040584 ADGRF5Q8IZF2 1346 aa31.09■■■□□ 2.57
HOXC8-201ENST00000040584 MYOM2P54296 1465 aa31.08■■■□□ 2.57
HOXC8-201ENST00000040584 PPLO60437 1756 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms