RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 PZPP20742 1482 aa18.03■□□□□ 0.48
NME1-201ENST00000013034 CCDC141Q6ZP82 1450 aa18.03■□□□□ 0.48
NME1-201ENST00000013034 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
NME1-201ENST00000013034 POLR1AO95602 1720 aaPredicted RBP18.02■□□□□ 0.48
NME1-201ENST00000013034 CPS1P31327 1500 aa18.02■□□□□ 0.47
NME1-201ENST00000013034 TNRQ92752 1358 aa18.02■□□□□ 0.47
NME1-201ENST00000013034 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
NME1-201ENST00000013034 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
NME1-201ENST00000013034 NLRP1Q9C000 1473 aa17.97■□□□□ 0.47
NME1-201ENST00000013034 NCOA2Q15596 1464 aa17.96■□□□□ 0.47
NME1-201ENST00000013034 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
NME1-201ENST00000013034 KIF3BO15066 747 aa17.95■□□□□ 0.46
NME1-201ENST00000013034 ARHGEF5Q12774 1597 aa17.95■□□□□ 0.46
NME1-201ENST00000013034 RSPH4AQ5TD94 716 aa17.94■□□□□ 0.46
NME1-201ENST00000013034 UGGT1Q9NYU2 1555 aa17.93■□□□□ 0.46
NME1-201ENST00000013034 DEPDC5O75140 1603 aa17.93■□□□□ 0.46
NME1-201ENST00000013034 MED1Q15648 1581 aaPredicted RBP17.92■□□□□ 0.46
NME1-201ENST00000013034 VWDEQ8N2E2 1590 aa17.92■□□□□ 0.46
NME1-201ENST00000013034 MIA2Q96PC5 1412 aa17.92■□□□□ 0.46
NME1-201ENST00000013034 FBXO31Q5XUX0 539 aaPredicted RBP17.92■□□□□ 0.46
NME1-201ENST00000013034 MED14O60244 1454 aa17.92■□□□□ 0.46
NME1-201ENST00000013034 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
NME1-201ENST00000013034 TOM1O60784 492 aa17.91■□□□□ 0.46
NME1-201ENST00000013034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.465e-11■■■■■ 54.8
NME1-201ENST00000013034 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
NME1-201ENST00000013034 ZC3H13Q5T200 1668 aaKnown RBP17.9■□□□□ 0.46
NME1-201ENST00000013034 ANKLE2Q86XL3 938 aa17.9■□□□□ 0.46
NME1-201ENST00000013034 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.46
NME1-201ENST00000013034 THEMISQ8N1K5 641 aaPredicted RBP17.89■□□□□ 0.45
NME1-201ENST00000013034 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
NME1-201ENST00000013034 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
NME1-201ENST00000013034 HSPA1LP34931 641 aa17.87■□□□□ 0.45
NME1-201ENST00000013034 ABCC3O15438 1527 aa17.87■□□□□ 0.45
NME1-201ENST00000013034 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
NME1-201ENST00000013034 IQGAP1P46940 1657 aa17.87■□□□□ 0.45
NME1-201ENST00000013034 PIP4K2BP78356 416 aa17.86■□□□□ 0.45
NME1-201ENST00000013034 SYNMO15061 1565 aa17.86■□□□□ 0.45
NME1-201ENST00000013034 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
NME1-201ENST00000013034 TSPY4P0CV99 314 aa17.84■□□□□ 0.45
NME1-201ENST00000013034 TSPY10P0CW01 314 aa17.84■□□□□ 0.45
NME1-201ENST00000013034 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
NME1-201ENST00000013034 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
NME1-201ENST00000013034 LRRC9Q6ZRR7 1453 aa17.81■□□□□ 0.44
NME1-201ENST00000013034 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
NME1-201ENST00000013034 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
NME1-201ENST00000013034 SCAF11Q99590 1463 aaKnown RBP17.76■□□□□ 0.43
NME1-201ENST00000013034 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
NME1-201ENST00000013034 DUOX2Q9NRD8 1548 aa17.76■□□□□ 0.43
NME1-201ENST00000013034 UBR1Q8IWV7 1749 aa17.75■□□□□ 0.43
NME1-201ENST00000013034 MYOM3Q5VTT5 1437 aa17.75■□□□□ 0.43
NME1-201ENST00000013034 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
NME1-201ENST00000013034 STRCP1A6NGW2 1772 aa17.75■□□□□ 0.43
NME1-201ENST00000013034 SLIT1O75093 1534 aa17.74■□□□□ 0.43
NME1-201ENST00000013034 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
NME1-201ENST00000013034 CEP152O94986 1710 aa17.74■□□□□ 0.43
NME1-201ENST00000013034 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
NME1-201ENST00000013034 ARHGAP31Q2M1Z3 1444 aa17.73■□□□□ 0.43
NME1-201ENST00000013034 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
NME1-201ENST00000013034 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
NME1-201ENST00000013034 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
NME1-201ENST00000013034 LTKP29376 864 aa17.64■□□□□ 0.41
NME1-201ENST00000013034 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
NME1-201ENST00000013034 PIK3C2BO00750 1634 aa17.64■□□□□ 0.41
NME1-201ENST00000013034 KDM5AP29375 1690 aaKnown RBP17.64■□□□□ 0.41
NME1-201ENST00000013034 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
NME1-201ENST00000013034 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
NME1-201ENST00000013034 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
NME1-201ENST00000013034 ABCC5O15440 1437 aa17.63■□□□□ 0.41
NME1-201ENST00000013034 LMTK2Q8IWU2 1503 aa17.62■□□□□ 0.41
NME1-201ENST00000013034 KANK1Q14678 1352 aa17.62■□□□□ 0.41
NME1-201ENST00000013034 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
NME1-201ENST00000013034 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
NME1-201ENST00000013034 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
NME1-201ENST00000013034 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
NME1-201ENST00000013034 DAPK1P53355 1430 aa17.6■□□□□ 0.41
NME1-201ENST00000013034 FAM135BQ49AJ0 1406 aa17.6■□□□□ 0.41
NME1-201ENST00000013034 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
NME1-201ENST00000013034 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
NME1-201ENST00000013034 NKTRP30414 1462 aaKnown RBP17.56■□□□□ 0.4
NME1-201ENST00000013034 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
NME1-201ENST00000013034 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
NME1-201ENST00000013034 NWD1Q149M9 1564 aa17.56■□□□□ 0.4
NME1-201ENST00000013034 CFAP65Q6ZU64 1925 aaKnown RBP17.56■□□□□ 0.4
NME1-201ENST00000013034 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
NME1-201ENST00000013034 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
NME1-201ENST00000013034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.45e-8■□□□□ 8.5
NME1-201ENST00000013034 TET3O43151 1660 aa17.54■□□□□ 0.4
NME1-201ENST00000013034 NOS1P29475 1434 aa17.54■□□□□ 0.4
NME1-201ENST00000013034 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
NME1-201ENST00000013034 KCNA6P17658 529 aa17.52■□□□□ 0.4
NME1-201ENST00000013034 RGS17Q9UGC6 210 aaPredicted RBP17.52■□□□□ 0.4
NME1-201ENST00000013034 IDI1Q13907 227 aa17.5■□□□□ 0.39
NME1-201ENST00000013034 ADGRL2O95490 1459 aa17.5■□□□□ 0.39
NME1-201ENST00000013034 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
NME1-201ENST00000013034 LOC105371045A0A1W2PR82 267 aa17.48■□□□□ 0.39
NME1-201ENST00000013034 APLP2Q06481 763 aa17.48■□□□□ 0.39
NME1-201ENST00000013034 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
NME1-201ENST00000013034 MSH6P52701 1360 aa17.47■□□□□ 0.39
NME1-201ENST00000013034 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
NME1-201ENST00000013034 SLC52A1Q9NWF4 448 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms