RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 KDM5DQ9BY66 1539 aa38.72■■■■□ 3.79
TSR3-201ENST00000007390 EIF2AK4Q9P2K8 1649 aaKnown RBP38.71■■■■□ 3.79
TSR3-201ENST00000007390 RNF17Q9BXT8 1623 aaKnown RBP38.7■■■■□ 3.79
TSR3-201ENST00000007390 DUOX2Q9NRD8 1548 aa38.69■■■■□ 3.78
TSR3-201ENST00000007390 KIF15Q9NS87 1388 aa38.65■■■■□ 3.78
TSR3-201ENST00000007390 WASHC2CQ9Y4E1 1318 aa38.63■■■■□ 3.77
TSR3-201ENST00000007390 PZPP20742 1482 aa38.6■■■■□ 3.77
TSR3-201ENST00000007390 ERBINQ96RT1 1412 aa38.59■■■■□ 3.77
TSR3-201ENST00000007390 MYO3AQ8NEV4 1616 aa38.59■■■■□ 3.77
TSR3-201ENST00000007390 STRCQ7RTU9 1775 aa38.57■■■■□ 3.77
TSR3-201ENST00000007390 MROH1Q8NDA8 1641 aa38.56■■■■□ 3.76
TSR3-201ENST00000007390 ZNF142P52746 1687 aaPredicted RBP38.55■■■■□ 3.76
TSR3-201ENST00000007390 RRP7BPQ9NSQ0 103 aa38.55■■■■□ 3.76
TSR3-201ENST00000007390 ZC3H13Q5T200 1668 aaKnown RBP38.55■■■■□ 3.76
TSR3-201ENST00000007390 ANKRD30AQ9BXX3 1397 aa38.55■■■■□ 3.76
TSR3-201ENST00000007390 ABCC3O15438 1527 aa38.53■■■■□ 3.76
TSR3-201ENST00000007390 FAM50AQ14320 339 aaKnown RBP38.52■■■■□ 3.76
TSR3-201ENST00000007390 CEP170BQ9Y4F5 1589 aaPredicted RBP38.52■■■■□ 3.76
TSR3-201ENST00000007390 DMRT2Q9Y5R5 561 aa38.51■■■■□ 3.76
TSR3-201ENST00000007390 NCOA1Q15788 1441 aa38.51■■■■□ 3.76
TSR3-201ENST00000007390 ADGRL2O95490 1459 aa38.51■■■■□ 3.76
TSR3-201ENST00000007390 CHIC2Q9UKJ5 165 aa38.48■■■■□ 3.75
TSR3-201ENST00000007390 TNRQ92752 1358 aa38.47■■■■□ 3.75
TSR3-201ENST00000007390 FBXO31Q5XUX0 539 aaPredicted RBP38.47■■■■□ 3.75
TSR3-201ENST00000007390 PRDM15P57071 1507 aaPredicted RBP38.47■■■■□ 3.75
TSR3-201ENST00000007390 CAMSAP1Q5T5Y3 1602 aa38.46■■■■□ 3.75
TSR3-201ENST00000007390 A2ML1A8K2U0 1454 aa38.44■■■■□ 3.74
TSR3-201ENST00000007390 PTPRTO14522 1441 aa38.43■■■■□ 3.74
TSR3-201ENST00000007390 DEPDC5O75140 1603 aa38.42■■■■□ 3.74
TSR3-201ENST00000007390 ILDR1Q86SU0 546 aaPredicted RBP38.42■■■■□ 3.74
TSR3-201ENST00000007390 PLA2R1Q13018 1463 aa38.41■■■■□ 3.74
TSR3-201ENST00000007390 CEP152O94986 1710 aa38.37■■■■□ 3.73
TSR3-201ENST00000007390 SPATA31D1Q6ZQQ2 1576 aa38.35■■■■□ 3.73
TSR3-201ENST00000007390 NLRP1Q9C000 1473 aa38.35■■■■□ 3.73
TSR3-201ENST00000007390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.32■■■■□ 3.73
TSR3-201ENST00000007390 ARHGAP31Q2M1Z3 1444 aa38.32■■■■□ 3.73
TSR3-201ENST00000007390 PPARGC1BQ86YN6 1023 aaKnown RBP38.32■■■■□ 3.72
TSR3-201ENST00000007390 ERVK-7P63135 1459 aa38.32■■■■□ 3.72
TSR3-201ENST00000007390 KANK1Q14678 1352 aa38.3■■■■□ 3.72
TSR3-201ENST00000007390 PKD2Q13563 968 aa38.29■■■■□ 3.72
TSR3-201ENST00000007390 VWDEQ8N2E2 1590 aa38.28■■■■□ 3.72
TSR3-201ENST00000007390 ANKRD50Q9ULJ7 1429 aa38.28■■■■□ 3.72
TSR3-201ENST00000007390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.27■■■■□ 3.72
TSR3-201ENST00000007390 LMTK2Q8IWU2 1503 aa38.26■■■■□ 3.72
TSR3-201ENST00000007390 ROCK1Q13464 1354 aa38.25■■■■□ 3.71
TSR3-201ENST00000007390 FBXO41Q8TF61 875 aa38.25■■■■□ 3.71
TSR3-201ENST00000007390 NCKAP5LQ9HCH0 1330 aa38.25■■■■□ 3.71
TSR3-201ENST00000007390 CERKQ8TCT0 537 aa38.21■■■■□ 3.71
TSR3-201ENST00000007390 UGGT1Q9NYU2 1555 aa38.2■■■■□ 3.71
TSR3-201ENST00000007390 THEMISQ8N1K5 641 aaPredicted RBP38.17■■■■□ 3.7
TSR3-201ENST00000007390 RRBP1Q9P2E9 1410 aaKnown RBP38.14■■■■□ 3.7
TSR3-201ENST00000007390 EFCAB6Q5THR3 1501 aa38.12■■■■□ 3.69
TSR3-201ENST00000007390 POLR1AO95602 1720 aaPredicted RBP38.1■■■■□ 3.69
TSR3-201ENST00000007390 LTBP4Q8N2S1 1624 aa38.1■■■■□ 3.69
TSR3-201ENST00000007390 CFAP65Q6ZU64 1925 aaKnown RBP38.09■■■■□ 3.69
TSR3-201ENST00000007390 NEURL4Q96JN8 1562 aa38.09■■■■□ 3.69
TSR3-201ENST00000007390 UNC13BO14795 1591 aa38.07■■■■□ 3.69
TSR3-201ENST00000007390 ITGAEP38570 1179 aa38.06■■■■□ 3.68
TSR3-201ENST00000007390 ANKLE2Q86XL3 938 aa38.06■■■■□ 3.68
TSR3-201ENST00000007390 UBR1Q8IWV7 1749 aa38.03■■■■□ 3.68
TSR3-201ENST00000007390 NOS1P29475 1434 aa38.01■■■■□ 3.68
TSR3-201ENST00000007390 MED14O60244 1454 aa38.01■■■■□ 3.67
TSR3-201ENST00000007390 RPRD2Q5VT52 1461 aaKnown RBP38.01■■■■□ 3.67
TSR3-201ENST00000007390 TET3O43151 1660 aa37.99■■■■□ 3.67
TSR3-201ENST00000007390 ZNF335Q9H4Z2 1342 aaPredicted RBP37.98■■■■□ 3.67
TSR3-201ENST00000007390 SYNMO15061 1565 aa37.97■■■■□ 3.67
TSR3-201ENST00000007390 IQSEC2Q5JU85 1478 aa37.95■■■■□ 3.67
TSR3-201ENST00000007390 NPHP4O75161 1426 aaPredicted RBP37.95■■■■□ 3.67
TSR3-201ENST00000007390 PIK3C2BO00750 1634 aa37.94■■■■□ 3.66
TSR3-201ENST00000007390 ARHGAP23Q9P227 1491 aa37.93■■■■□ 3.66
TSR3-201ENST00000007390 SLIT1O75093 1534 aa37.92■■■■□ 3.66
TSR3-201ENST00000007390 KDM5AP29375 1690 aaKnown RBP37.92■■■■□ 3.66
TSR3-201ENST00000007390 GCC2Q8IWJ2 1684 aa37.92■■■■□ 3.66
TSR3-201ENST00000007390 IQGAP3Q86VI3 1631 aa37.91■■■■□ 3.66
TSR3-201ENST00000007390 IDI1Q13907 227 aa37.89■■■■□ 3.66
TSR3-201ENST00000007390 SLC52A1Q9NWF4 448 aa37.87■■■■□ 3.65
TSR3-201ENST00000007390 SCAF11Q99590 1463 aaKnown RBP37.87■■■■□ 3.65
TSR3-201ENST00000007390 IQGAP1P46940 1657 aa37.87■■■■□ 3.65
TSR3-201ENST00000007390 NUP155O75694 1391 aa37.84■■■■□ 3.65
TSR3-201ENST00000007390 TMEM2Q9UHN6 1383 aa37.82■■■■□ 3.65
TSR3-201ENST00000007390 STAG3Q9UJ98 1225 aa37.81■■■■□ 3.64
TSR3-201ENST00000007390 ADGRB3O60242 1522 aa37.81■■■■□ 3.64
TSR3-201ENST00000007390 NAIPQ13075 1403 aa37.8■■■■□ 3.64
TSR3-201ENST00000007390 E9PCH4 1651 aa37.79■■■■□ 3.64
TSR3-201ENST00000007390 LTKP29376 864 aa37.78■■■■□ 3.64
TSR3-201ENST00000007390 TXNDC2Q86VQ3 553 aa37.78■■■■□ 3.64
TSR3-201ENST00000007390 CPS1P31327 1500 aa37.77■■■■□ 3.64
TSR3-201ENST00000007390 EID1Q9Y6B2 187 aa37.76■■■■□ 3.64
TSR3-201ENST00000007390 HFM1A2PYH4 1435 aa37.73■■■■□ 3.63
TSR3-201ENST00000007390 TMEM131LA2VDJ0 1609 aa37.64■■■■□ 3.62
TSR3-201ENST00000007390 ZFYVE9O95405 1425 aa37.6■■■■□ 3.61
TSR3-201ENST00000007390 STRCP1A6NGW2 1772 aa37.57■■■■□ 3.6
TSR3-201ENST00000007390 MYO5BQ9ULV0 1848 aa37.56■■■■□ 3.6
TSR3-201ENST00000007390 UBAP1LF5GYI3 381 aa37.54■■■■□ 3.6
TSR3-201ENST00000007390 RIMS2Q9UQ26 1411 aa37.53■■■■□ 3.6
TSR3-201ENST00000007390 SPHKAPQ2M3C7 1700 aa37.53■■■■□ 3.6
TSR3-201ENST00000007390 HDGFP51858 240 aaKnown RBP37.51■■■■□ 3.6
TSR3-201ENST00000007390 LRRC7Q96NW7 1537 aa37.51■■■■□ 3.59
TSR3-201ENST00000007390 PLEKHG1Q9ULL1 1385 aa37.48■■■■□ 3.59
TSR3-201ENST00000007390 CHGAP10645 457 aaKnown RBP37.48■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms